BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0410300 Os10g0410300|Os10g0410300
(293 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0410300 Homeodomain-like containing protein 574 e-164
Os04g0286500 Homeodomain-like containing protein 275 2e-74
Os02g0466700 262 2e-70
Os07g0575300 211 6e-55
Os06g0534700 201 4e-52
Os11g0514200 200 1e-51
Os08g0225900 157 1e-38
Os08g0561000 149 2e-36
Os09g0424900 142 2e-34
Os09g0241700 Homeodomain-like containing protein 108 4e-24
Os10g0449100 101 7e-22
Os11g0282700 Homeodomain-like containing protein 96 3e-20
Os01g0821200 95 5e-20
Os06g0521000 Homeodomain-like containing protein 93 2e-19
Os01g0527800 93 2e-19
Os01g0385600 Homeodomain-like containing protein 89 4e-18
Os08g0178900 Homeodomain-like containing protein 82 3e-16
Os01g0549300 Homeodomain-like containing protein 81 8e-16
Os06g0635500 Homeodomain-like containing protein 80 2e-15
Os06g0716600 78 6e-15
Os01g0373400 Homeodomain-like containing protein 78 7e-15
Os01g0261900 73 2e-13
Os09g0317700 Homeodomain-like containing protein 73 2e-13
Os01g0547400 Conserved hypothetical protein 70 2e-12
Os05g0572200 69 3e-12
Os11g0254700 69 4e-12
Os05g0394100 Conserved hypothetical protein 69 4e-12
Os07g0208400 69 4e-12
Os08g0280500 69 6e-12
Os09g0259300 67 1e-11
Os10g0342200 67 1e-11
Os01g0180100 66 2e-11
Os09g0318600 Homeodomain-like containing protein 65 5e-11
Os02g0703750 65 6e-11
>Os10g0410300 Homeodomain-like containing protein
Length = 293
Score = 574 bits (1479), Expect = e-164, Method: Compositional matrix adjust.
Identities = 276/293 (94%), Positives = 276/293 (94%)
Query: 1 MQGEEYMLKGDDFAKAKLGPKKPFRPIKPRGCWADDRLTTHQGPLNLITLCTHRRTRINW 60
MQGEEYMLKGDDFAKAKLGPKKPFRPIKPRGCWADDRLTTHQGPLNLITLCTHRRTRINW
Sbjct: 1 MQGEEYMLKGDDFAKAKLGPKKPFRPIKPRGCWADDRLTTHQGPLNLITLCTHRRTRINW 60
Query: 61 TEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKTHWGD 120
TEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKTHWGD
Sbjct: 61 TEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKTHWGD 120
Query: 121 VKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKDLPKW 180
VKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKDLPKW
Sbjct: 121 VKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKDLPKW 180
Query: 181 CRIVQEDSGNKRTKEETISKEKRPDXXXXXXXXXXXXXXXXXPSPLGNQPSQNMILYHEA 240
CRIVQEDSGNKRTKEETISKEKRPD PSPLGNQPSQNMILYHEA
Sbjct: 181 CRIVQEDSGNKRTKEETISKEKRPDGQKKAKAGLKGKGKDAAPSPLGNQPSQNMILYHEA 240
Query: 241 MSLKATAMIKSAKEKKYQTYLKLLEKDTSNFSEAHHKRHEGVLDQLAKELAGE 293
MSLKATAMIKSAKEKKYQTYLKLLEKDTSNFSEAHHKRHEGVLDQLAKELAGE
Sbjct: 241 MSLKATAMIKSAKEKKYQTYLKLLEKDTSNFSEAHHKRHEGVLDQLAKELAGE 293
>Os04g0286500 Homeodomain-like containing protein
Length = 417
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/270 (52%), Positives = 177/270 (65%), Gaps = 30/270 (11%)
Query: 54 RRTRINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQ 113
R T +NWTEEENL LLS W++ S D + G D+K E+YW+ VA FN +A +N KR+V Q
Sbjct: 148 RGTHVNWTEEENLRLLSSWLNNSLDSINGNDKKGEYYWRDVAAEFNGNASSNNRKRTVVQ 207
Query: 114 LKTHWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWRE 173
KTHWG VK+DI KFCG Y R + TW SG SDDM+M AHA+++ EN DK FTLEYMWRE
Sbjct: 208 CKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDMIMEKAHALYKSENNDKTFTLEYMWRE 267
Query: 174 VKDLPKWCRIVQEDSGNKRTK----------------EETISKEKRPDXXXXXXXXXXXX 217
+KD PKW RI++EDS NKRTK EET KEKRP+
Sbjct: 268 LKDQPKWRRILEEDSKNKRTKISESGAYTSSSNQETEEETSRKEKRPEGQKKAKAKLKGK 327
Query: 218 XXXXXPSPLGNQPSQNMILYHEAMSLKATAMIKSAKE--------------KKYQTYLKL 263
PSPLG+QPSQ+ +L++EA+ L+A A++KSA+ +KYQTYLKL
Sbjct: 328 GKKPAPSPLGDQPSQDFVLFNEAVKLRAEAVLKSAEATTKSAEAKKEQTRMEKYQTYLKL 387
Query: 264 LEKDTSNFSEAHHKRHEGVLDQLAKELAGE 293
L+KDT+NFS+A KRHE VL++LA ELA E
Sbjct: 388 LDKDTANFSDAKLKRHEAVLEKLATELAEE 417
>Os02g0466700
Length = 686
Score = 262 bits (669), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/276 (50%), Positives = 179/276 (64%), Gaps = 36/276 (13%)
Query: 54 RRTRINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQ 113
R TR+NWTEEEN+ LLS W++ S DP+ G D+K+E+YWKAVA FN++ + KR+V Q
Sbjct: 411 RGTRVNWTEEENIRLLSSWLNNSVDPINGNDKKAEYYWKAVAVEFNSNTSRSNRKRTVVQ 470
Query: 114 LKTHWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWRE 173
KTHWG VK++I KFCG Y R ++T+ SG SDDM+M AH +F+ EN +KPFTLEYMWRE
Sbjct: 471 CKTHWGGVKKEIGKFCGAYSRARSTFSSGYSDDMIMEKAHIMFKSENNEKPFTLEYMWRE 530
Query: 174 VKDLPKWCRIVQEDSGNKRTK----------------------EETISKEKRPDXXXXXX 211
+KD PKW R+++EDS NKRTK +E K+KRP+
Sbjct: 531 LKDQPKWRRVLEEDSKNKRTKISESGAYTSSSNQDTEEENRRKKENRRKKKRPEGQKKAK 590
Query: 212 XXXXXXXXXXXPSPLGNQPSQNMILYHEAMSLKATAMIKSA--------------KEKKY 257
PSPLG+QP Q+ +LY+EA+ +KA AM+KSA + +KY
Sbjct: 591 AKLKGRGKNVAPSPLGDQPCQDFVLYNEAIKVKAEAMLKSAEATSKSAEAKKEYTRMEKY 650
Query: 258 QTYLKLLEKDTSNFSEAHHKRHEGVLDQLAKELAGE 293
QTYLKLL+KDTSNFS+A KRHE VL++LA ELA E
Sbjct: 651 QTYLKLLDKDTSNFSDAKLKRHEAVLEKLATELAEE 686
>Os07g0575300
Length = 361
Score = 211 bits (536), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/251 (46%), Positives = 152/251 (60%), Gaps = 34/251 (13%)
Query: 77 TDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKTHWGDVKRDITKFCGVYGRLK 136
DP+KG D+KSE YWKAVA FN++ P+NG+KR+ KQ +THW +VKRD+TKFCG Y + +
Sbjct: 111 VDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQCRTHWDNVKRDVTKFCGFYSKAR 170
Query: 137 ATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKDLPKWCRIVQEDSGNKRTK-- 194
T+ SG SDDM+M A ++K N KPFTLEYMW+++KD PKW R+++E S NKR K
Sbjct: 171 TTFTSGYSDDMIMEKACEWYKKHNNQKPFTLEYMWKDLKDQPKWRRVLEESSHNKRNKIS 230
Query: 195 -----------EETISKEKRPDXXXXXXXXXXXXXXXXXPSPLGNQPSQNMILYHEAM-- 241
+ E++ PSPLG++PSQNM+L+HEA+
Sbjct: 231 ESGAYTSSSNQDTEEETERKEKRPEGQKAAKQRQKGKGAPSPLGDKPSQNMVLFHEAITT 290
Query: 242 -------------------SLKATAMIKSAKEKKYQTYLKLLEKDTSNFSEAHHKRHEGV 282
KA A + A+ +KYQ YLKL+EKDTS FSEA KRHE V
Sbjct: 291 KAAALLKAAEATLIGAEAKKEKAIAKKEKARAEKYQMYLKLMEKDTSTFSEAKLKRHENV 350
Query: 283 LDQLAKELAGE 293
LDQLA+ELA E
Sbjct: 351 LDQLARELAEE 361
>Os06g0534700
Length = 409
Score = 201 bits (512), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 133/201 (66%), Gaps = 13/201 (6%)
Query: 54 RRTRINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQ 113
R TRINWTE++N+ L+S W++ S DP+KG D+KSE YWKAVA FN++ P+NG+KR+ KQ
Sbjct: 157 RGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQ 216
Query: 114 LKTHWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWRE 173
+THW +VKRD+TKFCG Y + + T+ SG SDDM+M A ++K N KPFTLEYMW++
Sbjct: 217 CRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDMIMEKAREWYKKHNNQKPFTLEYMWKD 276
Query: 174 VKDLPKWCRIVQEDSGNKRTK-------------EETISKEKRPDXXXXXXXXXXXXXXX 220
+KD PKW R+++E S NKR+K + E++
Sbjct: 277 LKDQPKWRRVLEESSHNKRSKISESGAYTSSSNQDTEEETERKEKRPEGQKAAKQRQKGK 336
Query: 221 XXPSPLGNQPSQNMILYHEAM 241
PSPLG++PSQNM+L+HEA+
Sbjct: 337 GAPSPLGDKPSQNMVLFHEAI 357
>Os11g0514200
Length = 409
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 132/201 (65%), Gaps = 13/201 (6%)
Query: 54 RRTRINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQ 113
R TRINWTE++N+ L+S W++ S DP+KG D+KSE YWKAVA FN++ P+NG+KR+ KQ
Sbjct: 157 RGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSNGNKRNPKQ 216
Query: 114 LKTHWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWRE 173
+THW +VKRD+TKFCG Y + + T+ SG SDDM+M A ++K N KPFTLEYMW++
Sbjct: 217 CRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDMIMEKAREWYKKHNNQKPFTLEYMWKD 276
Query: 174 VKDLPKWCRIVQEDSGNKRTK-------------EETISKEKRPDXXXXXXXXXXXXXXX 220
+KD PKW R+++E S NKR K + E++
Sbjct: 277 LKDQPKWRRVLEESSHNKRNKISESGAYTSSSNQDTEEETERKEKRPEGQKAAKQRQKGK 336
Query: 221 XXPSPLGNQPSQNMILYHEAM 241
PSPLG++P+QNM+L+HEA+
Sbjct: 337 GAPSPLGDKPNQNMVLFHEAI 357
>Os08g0225900
Length = 175
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 109/175 (62%), Gaps = 30/175 (17%)
Query: 149 MNSAHAIFEKENKDKPFTLEYMWREVKDLPKWCRIVQEDSGNKRTK-------------- 194
M AHA+++ EN DK FTLEYMWRE+KD PKW RI++EDS NKRTK
Sbjct: 1 MEKAHALYKSENNDKTFTLEYMWRELKDQPKWQRILEEDSKNKRTKISESGAYTSSSNQE 60
Query: 195 --EETISKEKRPDXXXXXXXXXXXXXXXXXPSPLGNQPSQNMILYHEAMSLKATAMIKSA 252
EET KEKRP+ PSPLG+QPSQ+ +L++EA+ L+A A++KSA
Sbjct: 61 TEEETSRKEKRPEGQKKAKAKLKGKGKKPAPSPLGDQPSQDFVLFNEAVKLRAEAVLKSA 120
Query: 253 KE--------------KKYQTYLKLLEKDTSNFSEAHHKRHEGVLDQLAKELAGE 293
+ +KYQTYLKLL+KDT+NFS+A KRHE VL++LA ELA E
Sbjct: 121 EATTKSAEAKKEQTRMEKYQTYLKLLDKDTANFSDAKLKRHEAVLEKLATELAEE 175
>Os08g0561000
Length = 175
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 106/175 (60%), Gaps = 30/175 (17%)
Query: 149 MNSAHAIFEKENKDKPFTLEYMWREVKDLPKWCRIVQEDSGNKRTK-------------- 194
M AHA+++ EN DK FTLEYMWRE+KD PKW RI++EDS NKRTK
Sbjct: 1 MEKAHALYKSENNDKTFTLEYMWRELKDQPKWRRILEEDSKNKRTKISESGAYTSSSNQE 60
Query: 195 --EETISKEKRPDXXXXXXXXXXXXXXXXXPSPLGNQPSQNMILYHEAMSLKATAMIKSA 252
EET KEKRP+ PSPLG+QPSQ+ +L +EA+ L+A A++KS
Sbjct: 61 TEEETSRKEKRPEGQKKAKVKLKGKGKKHAPSPLGDQPSQDFVLLNEAVKLRAEAVLKST 120
Query: 253 KE--------------KKYQTYLKLLEKDTSNFSEAHHKRHEGVLDQLAKELAGE 293
+ +KYQTYLKLL+KDT+NF++ KRHE +L++LA ELA E
Sbjct: 121 EATTKSAEAKKEQTRMEKYQTYLKLLDKDTANFNDVKLKRHEAILEKLATELAEE 175
>Os09g0424900
Length = 149
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 96/150 (64%), Gaps = 19/150 (12%)
Query: 103 PTNGHKRSVKQLKTHWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKD 162
P+NG+KR+ KQ +THW +VKRD+TKFCG Y + + T+ SG SD+M+M A ++ N D
Sbjct: 2 PSNGNKRTAKQCRTHWDNVKRDVTKFCGFYAKARNTFTSGYSDEMIMEKAREWYKSRNND 61
Query: 163 KPFTLEYMWREVKDLPKWCRIVQEDSGNKR----------------TKEETISKEKRPDX 206
KPFTLEYMW+++KD PKW R++++ S NKR T++E++SKEKRP+
Sbjct: 62 KPFTLEYMWKDLKDQPKWRRVLEQSSKNKRNKISESGAYTSSSNQDTEKESVSKEKRPE- 120
Query: 207 XXXXXXXXXXXXXXXXPSPLGNQPSQNMIL 236
PSPLG++PSQNMIL
Sbjct: 121 --GQKAAKQRQKGKCEPSPLGDKPSQNMIL 148
>Os09g0241700 Homeodomain-like containing protein
Length = 315
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 37/252 (14%)
Query: 44 PLNLITLCTHRRT-RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSA 102
P+N++ R R++W ++E+L L+S W++ S DP++ +K++ YW VA +N++
Sbjct: 39 PINVVNGHVARTDKRLSWMKDEDLRLISAWLNNSNDPIESNFKKNDKYWGDVAAAYNSTT 98
Query: 103 PTNGHKRSVKQLKTHWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKD 162
P N R VKQ+K +G +++ + FC + + + + SG+S++ +MN A I+E + KD
Sbjct: 99 PKN-RARLVKQVKDRFGKIRKKVGNFCCSWKEVNSLYASGESNEDLMNKAQKIYENDFKD 157
Query: 163 KPFTLEYMWREVKDLPKW-CRIVQEDSGNKRTKE--ETISKEKRPDXXXXXXXXXXXXXX 219
PF + W E+K PKW + Q D NKR + + I + D
Sbjct: 158 GPFLFMHCWNELKKQPKWHAYLEQLDKSNKRKADYNDVIPLDDEED-------------- 203
Query: 220 XXXPSPLGNQPSQNMILYHEAMSLKATAMIKSAKEK-KYQTYLKLLEKDTSNFSEAHHKR 278
P P+G KA+ +S KEK K Q LE D F +AH
Sbjct: 204 --IPRPIG---------------AKASKAQRSCKEKSKVQVCTTELEDDIRKFMDAHAAT 246
Query: 279 HEGVLDQLAKEL 290
EG + L ++
Sbjct: 247 KEGQNEVLETQI 258
>Os10g0449100
Length = 424
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 91/158 (57%), Gaps = 11/158 (6%)
Query: 57 RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKT 116
R+ W +E+L L+S W+++S DP+ G +K+E YW V +++N++ P N KR VK LK
Sbjct: 145 RLTWASDEDLRLVSAWLYHSNDPINGNGKKNESYWGDVVELYNSTTPIN-RKREVKHLKD 203
Query: 117 HWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDK-PFTLEYMWREVK 175
W +KR + FC + + + SG SDD + + A+ + + ++ PFT+ + W+ ++
Sbjct: 204 RWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVDDYPNEGPFTVLHCWKVLR 263
Query: 176 DLPKWCRIVQE---------DSGNKRTKEETISKEKRP 204
D PKW +++E D G+ ++ I +++RP
Sbjct: 264 DEPKWHAVLEELEKPHKRSLDDGSDTLSQKDIGEKERP 301
>Os11g0282700 Homeodomain-like containing protein
Length = 514
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
Query: 42 QGPLNLI-----TLCTHRRTRINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVAD 96
Q P+N+ T R+ WT EE++ L+S W++ D + G +K++ YW V
Sbjct: 155 QHPINIDSGGEETPTVRTEKRLTWTHEEDIRLVSAWLNNLNDSINGNFKKNDCYWGDVTT 214
Query: 97 VFNTSAPTNGHKRSVKQLKTHWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIF 156
+N++ P N R KQ+K + +K+++ +FC Y +K+ + SGQ++ +M HA +
Sbjct: 215 AYNSTTPRN-RMRQEKQIKDRFHKIKKNVGRFCCAYKEVKSIYVSGQNELQLMEKVHATY 273
Query: 157 EKENKDKPFTLEYMWREVKDLPKWCRIVQEDSGNKRTKEE 196
E + K+ FT + W+ ++D PKW ++E +TK +
Sbjct: 274 EADYKEGQFTFLHCWKALRDQPKWHAYLEELEKPNKTKSD 313
>Os01g0821200
Length = 356
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 88/158 (55%), Gaps = 11/158 (6%)
Query: 57 RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKT 116
R+ W +E+L L+S W+++S DP+ G +K+E Y V +++N + P N KR VK LK
Sbjct: 92 RLTWASDEDLRLVSAWLYHSNDPINGNGKKNESYRGDVVELYNNTTPIN-RKREVKHLKD 150
Query: 117 HWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDK-PFTLEYMWREVK 175
W +KR + FC + + + SG SDD + + A+ + + ++ PFT+ + W+ +
Sbjct: 151 QWQRIKRWVGFFCASWKKAALVYTSGYSDDQLRDFANQFYVNDYPNEGPFTVLHYWKVLH 210
Query: 176 DLPKWCRIVQE---------DSGNKRTKEETISKEKRP 204
D PKW +++E D G+ ++ I +++RP
Sbjct: 211 DEPKWHAVLEELEKPHKRSLDDGSDTLSQKDIGEKERP 248
>Os06g0521000 Homeodomain-like containing protein
Length = 291
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Query: 57 RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKT 116
R+ W+ EE++ L+S W++ S D + G +K++ YW V +N++ P N R KQ+K
Sbjct: 152 RLTWSTEEDIRLVSAWLNNSNDSISGNFKKNDRYWGDVTAEYNSTTPKN-RTRQEKQIKD 210
Query: 117 HWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKD 176
+ +K+++ +FC VY +K+ + SGQ+D + A A ++ + K+ PF+ + W ++D
Sbjct: 211 RFHKIKKNVGRFCCVYKEVKSIYVSGQNDMQLREKAEAAYQADYKEGPFSFLHCWNILRD 270
Query: 177 LPKWCRIVQE 186
PKW ++E
Sbjct: 271 QPKWHSYLEE 280
>Os01g0527800
Length = 484
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Query: 57 RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKT 116
R+ W+ EE++ L+S W++ S D + G +K++ YW V +N++ P N R KQ+K
Sbjct: 152 RLTWSTEEDIRLVSAWLNNSNDSISGNFKKNDCYWGDVTAEYNSTTPKN-RTRQEKQIKD 210
Query: 117 HWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKD 176
+ +K+++ +FC VY +K+ + +GQ+D + A A ++ + K+ PF+ + W ++D
Sbjct: 211 RFHKIKKNVGRFCCVYKEVKSIYVNGQNDMQLREKAEAAYQADYKEGPFSFLHCWNILRD 270
Query: 177 LPKWCRIVQE 186
PKW ++E
Sbjct: 271 QPKWHAYLEE 280
>Os01g0385600 Homeodomain-like containing protein
Length = 211
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
Query: 52 THRRTRINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSV 111
T R+ W+ EE+L L+S W++ S DP++ +K++ YW VA +N++ P++ R V
Sbjct: 68 TRTEKRLGWSTEEDLRLVSAWLNNSNDPIESNFKKNDKYWADVAAAYNSTTPSSRF-RQV 126
Query: 112 KQLKTHWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMW 171
KQ+K + +K+ + FC + + + SG+ + +M A I+E + KD PF L W
Sbjct: 127 KQVKDRFSKIKKKVGNFCCSWKEANSLYASGECNVDLMAKAQKIYENDFKDGPFLLTQCW 186
Query: 172 REVKDLPK 179
E+K PK
Sbjct: 187 NELKTQPK 194
>Os08g0178900 Homeodomain-like containing protein
Length = 389
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 57 RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKT 116
RI WTEEE++ L+S WI +STD G D+ YW V + +N + P KR++KQ K
Sbjct: 97 RILWTEEEDIRLMSAWIEHSTDSTCGADKGGGQYWGEVVESYNKTTPPL-RKRNLKQCKD 155
Query: 117 HWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDK---PFTLEYMWRE 173
W + R F Y + + + SG S+ M +++AH + +NK+ PF L +W+
Sbjct: 156 RWHKINRWTDLFECAYVKARRIFTSGYSNQMWIDAAHKFYVDDNKEAKLGPFVLMEVWKI 215
Query: 174 VKDLPKWCRIVQEDSGNKRTK 194
+++ KW + E+ N R +
Sbjct: 216 CREVSKW-KTYNENMRNARKR 235
>Os01g0549300 Homeodomain-like containing protein
Length = 389
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 57 RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKT 116
RI WTEEE++ L+S WI +STD G D+ YW V + +N + P KR++KQ K
Sbjct: 97 RILWTEEEDIILMSAWIEHSTDSTCGADKGGGQYWGEVVESYNKTTPPL-RKRNLKQCKD 155
Query: 117 HWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDK---PFTLEYMWRE 173
W + R F Y + + + SG S+ M +++AH + +NK+ PF L +W+
Sbjct: 156 RWHKINRWTDLFECAYVKARRIFTSGYSNQMWIDAAHKFYVDDNKEAKLGPFVLMEVWKI 215
Query: 174 VKDLPKW 180
+++ KW
Sbjct: 216 CREVSKW 222
>Os06g0635500 Homeodomain-like containing protein
Length = 376
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Query: 59 NWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKTHW 118
N+T +E++ L+S W++ DP++G+D+ YW + + F+ + RS L W
Sbjct: 111 NFTTQEDILLVSAWLNVGMDPIQGVDQSQGTYWARIHEYFHANKEFES-TRSESSLLNRW 169
Query: 119 GDVKRDITKFCGVYGRLKATWKSG-QSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKDL 177
++ D+ FCG R++A +SG + DD + N+ E++ K + F L + W +KD
Sbjct: 170 SAIQHDVNIFCGCMSRIEARNQSGSRVDDKIANACELFKEEDKKHRKFNLMHCWNILKDK 229
Query: 178 PKW 180
PKW
Sbjct: 230 PKW 232
>Os06g0716600
Length = 542
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 57 RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKT 116
RI WT+EE++ ++S W+ STD G DRK+E YW V +N + P++ +R+ KQ+K
Sbjct: 141 RIFWTQEEDVRMMSSWLLNSTDSTVGADRKNEQYWTDVEATYNETTPSH-RRRNAKQIKD 199
Query: 117 HWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKD---KPFTLEYMWRE 173
+ V + F + + + + SG +D M + AH + K+N+ PF L +W
Sbjct: 200 RFHKVNKWTDLFHSAWLKARMIYTSGYNDQMWIEKAHVFYIKDNEKLNLGPFVLMEVWNT 259
Query: 174 VKDLPKWC 181
VK KW
Sbjct: 260 VKTEAKWI 267
>Os01g0373400 Homeodomain-like containing protein
Length = 376
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 57 RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKT 116
RI WT +E++ ++S W+ +STD G D+ YW V + +N + P +R+ KQ K
Sbjct: 168 RIMWTPDEDVRVMSAWLEHSTDFTCGADKGGVQYWGEVVETYNKTTPPL-RRRNAKQCKD 226
Query: 117 HWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKD-----KPFTLEYMW 171
W + + F Y + + + SG S +M +++AH + +NK+ P+ L +W
Sbjct: 227 RWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKECKDVVGPYMLTEVW 286
Query: 172 REVKDLPKW 180
+ +D+PKW
Sbjct: 287 KICRDVPKW 295
>Os01g0261900
Length = 193
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 55 RTRINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQL 114
+ R+ WT +E+L L+S W++ S D ++ +K++ YW VA +N++ P + R VKQ+
Sbjct: 70 KKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKS-RVRQVKQV 128
Query: 115 KTHWGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYM 170
K +G +K+ + FC + + + SG+S D +M A ++E + KD + +Y+
Sbjct: 129 KDRFGKIKKKVGNFCCSWKEANSLYASGESHDDLMAKAVKMYENDFKDGTCSAQYV 184
>Os09g0317700 Homeodomain-like containing protein
Length = 495
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 57 RINWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKT 116
R+ WTEEE++ L+S W+ I+ K++ YW VA +N++ P +R VK LK
Sbjct: 125 RLAWTEEEDIRLISTWL---------INYKTDKYWDKVAAEYNSATP-GARRREVKHLKN 174
Query: 117 HWGDVKRDITKFCGVYGRLKATWKSGQSDDMVM---------NSAHAIFEKENKDKPFTL 167
W + + F + R+ A + SGQS+ M AH ++ +E K K FT
Sbjct: 175 RWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHK-FTF 233
Query: 168 EYMWREVKDLPKWCRIVQEDSGNKRTKEET 197
+ W V D PKW + S + + E+
Sbjct: 234 GHCWNAVWDQPKWKEYISSFSAKRVMRSES 263
>Os01g0547400 Conserved hypothetical protein
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 59 NWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVAD-VFNTSAPTNGHKRSVKQLKTH 117
N++E+E+ L+S W+H S DPV G ++ YW + + ++ TS T RS L
Sbjct: 152 NFSEQEDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHLYKTSKSTP--DRSQNSLMHR 209
Query: 118 WGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKDL 177
W ++ ++ KFCG +++ +SG S + A A+F KE +DKPF + W ++
Sbjct: 210 WKTIQENVNKFCGYLSQIEGRRQSGVSIHDKIAQAIAVF-KELEDKPFQFLHCWTLLRSQ 268
Query: 178 PKWCRIVQEDSGNK--RTKEETISKEKRP 204
KW +++ + K TK++ S + +P
Sbjct: 269 SKWHDKMKQITSQKPCATKKQKASTDGKP 297
>Os05g0572200
Length = 171
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
Query: 2 QGEEYMLKGDDFAKA---KLGPKKPFRPIKPRGCWADDRLTTHQGPLNL 47
QGEEYM KGDDFAKA + G + FRPIKPRG WADDRLT HQ +NL
Sbjct: 30 QGEEYMPKGDDFAKASSPREGQRSLFRPIKPRGHWADDRLTAHQESMNL 78
>Os11g0254700
Length = 365
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 1 MQGEEYMLKGDDFAKAK---LGPKKPFRPIKPRGCWADDRLTTHQGPLNL 47
M G+ YM K DDFA A GPKKPFR KPRG WADDRL HQGP+NL
Sbjct: 29 MLGKVYMSKADDFAIASSPPQGPKKPFRTFKPRGNWADDRLVAHQGPMNL 78
>Os05g0394100 Conserved hypothetical protein
Length = 255
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 59 NWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVAD-VFNTSAPTNGHKRSVKQLKTH 117
N++E+E+ L+S W+H S DPV G ++ YW + + ++ TS T RS L
Sbjct: 78 NFSEQEDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHLYKTSKST--PDRSQNSLMHR 135
Query: 118 WGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKDL 177
W ++ ++ KFCG +++ +SG S + A A+F KE +DKPF + W ++
Sbjct: 136 WKTIQENVNKFCGYLSQIEGRRQSGVSIHDKIAQAIAVF-KELEDKPFQFLHCWTLLRSQ 194
Query: 178 PKW 180
KW
Sbjct: 195 SKW 197
>Os07g0208400
Length = 255
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 59 NWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVAD-VFNTSAPTNGHKRSVKQLKTH 117
N++E+E+ L+S W+H S DPV G ++ YW + + ++ TS T RS L
Sbjct: 78 NFSEQEDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHLYKTSKSTPD--RSQNSLMHR 135
Query: 118 WGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKDL 177
W ++ ++ KFCG +++ +SG S + A A+F KE +DKPF + W ++
Sbjct: 136 WKTIQENVNKFCGYLSQIEGRRQSGVSIHDKIAQAIAVF-KELEDKPFQFLHCWTLLRSQ 194
Query: 178 PKW 180
KW
Sbjct: 195 SKW 197
>Os08g0280500
Length = 177
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 60 WTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKTHWG 119
++ EE++ L S W+ STDP+ G++RK E YW VA+ +N + +G KR LK HW
Sbjct: 3 YSHEEDIRLASAWLKCSTDPI-GVNRKGETYWVHVAETYNETT-LDGRKRDPTCLKGHWH 60
Query: 120 DVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREV 174
+ +T F G +L+ T SG++D+ +M+ A A++ K + T + R +
Sbjct: 61 KITPKVTLFNGCCVQLRNTPISGRNDEKLMDDALALYIKPDISDIMTACVIMRNM 115
>Os09g0259300
Length = 255
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 59 NWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVAD-VFNTSAPTNGHKRSVKQLKTH 117
N++E+E+ L+S W+H S DPV G ++ YW + + ++ TS T RS L
Sbjct: 78 NFSEQEDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHLYKTSKSTPD--RSQNSLMHR 135
Query: 118 WGDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKDL 177
W ++ ++ KFCG +++ +SG S + A +F KE +DKPF + W ++
Sbjct: 136 WKTIQENVNKFCGYLSQIEGRRQSGVSIHDKIAQAIVVF-KELEDKPFQFLHCWTLLRSQ 194
Query: 178 PKW 180
KW
Sbjct: 195 SKW 197
>Os10g0342200
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 58 INWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSV 111
+NWTEEENL LLS W++ S DP+ D+KSE+YW+AVA +N + N KR+V
Sbjct: 155 VNWTEEENLRLLSSWLNNSVDPIDSNDKKSEYYWRAVAAEYNNNTRRNDRKRTV 208
>Os01g0180100
Length = 365
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 59 NWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKTHW 118
N++E+E+ L+S W+H S DPV G ++ YW + + F ++ + RS L W
Sbjct: 80 NFSEQEDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHFYKTSKSTP-DRSQNSLMHRW 138
Query: 119 GDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKDLP 178
++ ++ KFCG +++ +SG S + A A+F KE + KPF + W ++
Sbjct: 139 KTIQENVNKFCGHLSQIEGRRQSGVSIHDKIAQAIAVF-KELEGKPFQFLHCWSLLRSQS 197
Query: 179 KW 180
KW
Sbjct: 198 KW 199
>Os09g0318600 Homeodomain-like containing protein
Length = 527
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 57 RINWTEEENLHLLSYW-IHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLK 115
R+ WTE+E++ L+S W I+Y TD YW+ V +N++ P +R ++ +K
Sbjct: 125 RLYWTEKEDIRLISAWLIYYKTD----------RYWEKVVAEYNSTIPAT-RRRELQHVK 173
Query: 116 THWGDVKRDITKFCGVYGRLKATWKSGQSDDMVM--------NSAHAIFEKENKDKPFTL 167
HW + R + F + R+KA + SG S+ M + N + E + F
Sbjct: 174 GHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLEEAEHNFAF 233
Query: 168 EYMWREVKDLPKW 180
++ W+ V + PKW
Sbjct: 234 DHCWKAVWNQPKW 246
>Os02g0703750
Length = 315
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 59 NWTEEENLHLLSYWIHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLKTHW 118
N++E+E+ L+S W+H S DPV G ++ YW + + F ++ + RS L W
Sbjct: 80 NFSEQEDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHFYKTSKSTP-DRSQNSLMHRW 138
Query: 119 GDVKRDITKFCGVYGRLKATWKSGQSDDMVMNSAHAIFEKENKDKPFTLEYMWREVKDLP 178
++ ++ KFCG +++ + G S + A A+F KE + KPF + W ++
Sbjct: 139 ETIQENVNKFCGYLSQIEGRRQGGVSIHDKIAQAIAVF-KELEGKPFQFLHCWSLLRSQS 197
Query: 179 KW 180
KW
Sbjct: 198 KW 199
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,781,441
Number of extensions: 386229
Number of successful extensions: 1062
Number of sequences better than 1.0e-10: 38
Number of HSP's gapped: 1014
Number of HSP's successfully gapped: 38
Length of query: 293
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 193
Effective length of database: 11,814,401
Effective search space: 2280179393
Effective search space used: 2280179393
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 155 (64.3 bits)