BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0537600 Os09g0537600|AK061004
(215 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0537600 Similar to Cyclophilin-like protein (Single do... 394 e-110
Os06g0708500 Similar to Cyclophilin 246 1e-65
AK062540 223 8e-59
Os05g0103200 Peptidyl-prolyl cis-trans isomerase, cyclophil... 214 5e-56
Os02g0121300 Cyclophilin 2 209 1e-54
Os06g0216800 Similar to Cyclophilin-40 (Expressed protein) 206 8e-54
Os09g0571400 Cyclophilin 1 202 2e-52
Os02g0761100 Similar to Cyclophilin-40 (Expressed protein) 201 3e-52
Os10g0154700 Similar to Cyclophilin Dicyp-2 194 3e-50
Os03g0811600 Similar to Peptidyl prolyl isomerase H 175 2e-44
Os08g0557500 Similar to Yarrowia lipolytica chromosome C of... 127 7e-30
Os06g0130500 Similar to Cyclophilin-like protein PPIL3b 105 2e-23
Os08g0559400 Similar to Cyclophilin-like protein 102 2e-22
Os01g0582400 Similar to Multidomain cyclophilin type peptid... 97 8e-21
Os06g0670400 86 1e-17
Os06g0670500 Similar to Multidomain cyclophilin type peptid... 85 4e-17
Os02g0111200 74 7e-14
Os08g0292600 Peptidyl-prolyl cis-trans isomerase, cyclophil... 69 3e-12
>Os09g0537600 Similar to Cyclophilin-like protein (Single domain cyclophilin type
peptidyl- prolyl cis-trans isomerase)
Length = 215
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/215 (91%), Positives = 197/215 (91%)
Query: 1 MLRKXXXXXXXXXXXXXXXXXXSRRESLGEVRLPAVTNRVYLDVEIDGQHIGRIVIGLYG 60
MLRK SRRESLGEVRLPAVTNRVYLDVEIDGQHIGRIVIGLYG
Sbjct: 1 MLRKVAVAFLACAALYLAFAAYSRRESLGEVRLPAVTNRVYLDVEIDGQHIGRIVIGLYG 60
Query: 61 DVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVRGDGKGSESIY 120
DVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVRGDGKGSESIY
Sbjct: 61 DVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVRGDGKGSESIY 120
Query: 121 GGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYV 180
GGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYV
Sbjct: 121 GGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYV 180
Query: 181 YAIEGGAGTYNGKPRKKVVITDSGEIPKEKWAEEV 215
YAIEGGAGTYNGKPRKKVVITDSGEIPKEKWAEEV
Sbjct: 181 YAIEGGAGTYNGKPRKKVVITDSGEIPKEKWAEEV 215
>Os06g0708500 Similar to Cyclophilin
Length = 249
Score = 246 bits (628), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 139/175 (79%), Gaps = 1/175 (0%)
Query: 33 LPAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGS 92
L VT++VY DVEIDG+ GR+V+GL+G VPKT NFRALCTGE+G G GK+LH+KGS
Sbjct: 75 LTEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGS 134
Query: 93 RFHRIIPGFMIQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQ 152
FHRIIP FMIQGGD GDG+G ESIYG F DENF +KHT PG+++MAN+G D+NGSQ
Sbjct: 135 AFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQ 194
Query: 153 FYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIP 207
F+ITT+ TSWLDG+HVVFG+V+ GMD VY IE G +G P+ KVVI DSGE+P
Sbjct: 195 FFITTVTTSWLDGKHVVFGKVLSGMDVVYKIE-AEGQQSGSPKSKVVIADSGELP 248
>AK062540
Length = 206
Score = 223 bits (568), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Query: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSR 93
P +TN+V+ D+ I G+ GR+V+GLYG VPKTV NFRALCTGE+G+G KGK LHYKGS
Sbjct: 26 PKITNQVFFDITIGGKDAGRVVMGLYGKTVPKTVENFRALCTGEKGMGKKGKPLHYKGST 85
Query: 94 FHRIIPGFMIQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQF 153
FHRIIP FMIQGGD G+G G ESIYG F DENF +KHT GV++MAN+G ++NGSQF
Sbjct: 86 FHRIIPNFMIQGGDFTDGNGMGGESIYGEKFEDENFKLKHTGEGVLSMANAGANTNGSQF 145
Query: 154 YITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIPKEKW 211
+I T+KTSWLDG HVVFGRVI GMD + A+E G+ G P ++VV+ DSGE+P+ +W
Sbjct: 146 FICTVKTSWLDGRHVVFGRVISGMDIIKAVE-AVGSGGGTPSEQVVVKDSGELPEAEW 202
>Os05g0103200 Peptidyl-prolyl cis-trans isomerase, cyclophilin type domain
containing protein
Length = 250
Score = 214 bits (544), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 131/175 (74%), Gaps = 10/175 (5%)
Query: 36 VTNRVYLDVEID---GQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGS 92
+TN+VY D+ I G+++GR+VIGLYGD VP+T NFRALCTGE+G G YKGS
Sbjct: 81 ITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGS 133
Query: 93 RFHRIIPGFMIQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQ 152
FHR+I FMIQGGD +G+G G +SIYG TF DENF + HT PGV++MAN+GP++NGSQ
Sbjct: 134 SFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQ 193
Query: 153 FYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIP 207
F+I T+KT WLDG HVVFG+VI+GMD V IE +P+KKVVI++ GE+P
Sbjct: 194 FFICTVKTPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKKVVISECGELP 248
>Os02g0121300 Cyclophilin 2
Length = 172
Score = 209 bits (531), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 122/170 (71%), Gaps = 1/170 (0%)
Query: 37 TNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHR 96
RV+ D+ + G GRIV+ LY VP+T NFRALCTGE+G+G GK LHYKGS FHR
Sbjct: 3 NTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHR 62
Query: 97 IIPGFMIQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYIT 156
+IP FM QGGD RG+G G ESIYG F DE F KH PG+++MAN+GP++NGSQF+I
Sbjct: 63 VIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFIC 122
Query: 157 TIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEI 206
T+ SWLDG+HVVFGRV++GMD V AIE G+ G K VVI D G++
Sbjct: 123 TVPCSWLDGKHVVFGRVVEGMDVVKAIE-KVGSRGGSTAKPVVIADCGQL 171
>Os06g0216800 Similar to Cyclophilin-40 (Expressed protein)
Length = 396
Score = 206 bits (525), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 39 RVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGH-KGKSLHYKGSRFHRI 97
R ++DV I G+ GRIVI LY VVP+T NFRALCTGE+G+G GK LHYKGS FHR+
Sbjct: 27 RCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVGAVTGKHLHYKGSCFHRV 86
Query: 98 IPGFMIQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYITT 157
I GFM+QGGDI GDG G ESIYG F DENF++KH G+++MANSGP++NGSQF+ITT
Sbjct: 87 IKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNTNGSQFFITT 146
Query: 158 IKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIPK 208
+T LDG+HVVFGRVI+GM V ++E +P V I D GE+P+
Sbjct: 147 TRTPHLDGKHVVFGRVIKGMGVVRSVEHAPVGEADRPTSDVEIVDCGELPE 197
>Os09g0571400 Cyclophilin 1
Length = 179
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 39 RVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRII 98
+V+ D+ I GR+V+ L+ D VPKT NFR LCTGE+G+G GK LHYKGS FHRII
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRII 66
Query: 99 PGFMIQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYITTI 158
P FM QGGD RG+G G ESIYG F DENF ++HT PGV++MAN+GP++NGSQF+I T
Sbjct: 67 PNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFICTT 126
Query: 159 KTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIPKE 209
+T+WLDG+HVVFG+V+ G V +E G+ +G ++V+I D G++ +
Sbjct: 127 RTTWLDGKHVVFGKVVDGYTVVEKME-QVGSGSGGTAERVLIEDCGQLADD 176
>Os02g0761100 Similar to Cyclophilin-40 (Expressed protein)
Length = 403
Score = 201 bits (512), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
Query: 39 RVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGI-GHKGKSLHYKGSRFHRI 97
R YLDV I G GRIV+ LY V P+T NFRALCTGE+G+ G LHYKGS HRI
Sbjct: 34 RCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKGSCIHRI 93
Query: 98 IPGFMIQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYITT 157
+ GFM+QGGDI GDG G ESIYG F DENF++KH G+++MAN+GPD+NGSQF+ITT
Sbjct: 94 VKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITT 153
Query: 158 IKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIPK 208
+T LDG+HVVFGRVI+GM V ++E + + +P +VI D GE+P+
Sbjct: 154 TRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGELPE 204
>Os10g0154700 Similar to Cyclophilin Dicyp-2
Length = 181
Score = 194 bits (494), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 120/172 (69%), Gaps = 6/172 (3%)
Query: 39 RVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKS-LHYKGSRFHRI 97
RV+LD+ I G+ +GR+VI L D VP T NFR LCTGE G GKS LHYKGS FHR+
Sbjct: 12 RVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERA-GRSGKSRLHYKGSAFHRV 70
Query: 98 IPGFMIQGGDIVRGDGKGSESIYGGT---FPDENFIVKHTHPGVIAMANSGPDSNGSQFY 154
+PGFM QGGDI G+G G ES G FPDE F VKH PGV++MAN+GP++NGSQF+
Sbjct: 71 VPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQFF 130
Query: 155 ITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEI 206
IT K WLDG HV FGRV+ GM V AI+ GT++GK K VVITD G +
Sbjct: 131 ITVDKAPWLDGRHVAFGRVVAGMGAVRAID-RTGTWSGKTVKPVVITDCGVL 181
>Os03g0811600 Similar to Peptidyl prolyl isomerase H
Length = 204
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 116/180 (64%), Gaps = 8/180 (4%)
Query: 31 VRLPAVTNRV-YLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLH- 88
+R P N V + DV I GRI + L+ D+VPKT NFR CTGE H+ L
Sbjct: 29 LRPPNPKNPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGE----HRKSGLPQ 84
Query: 89 -YKGSRFHRIIPGFMIQGGDIVRGDGKGSESIYGGTFPDENFIVKHTHPGVIAMANSGPD 147
YKG +FHR+I FMIQGGD ++GDG G SIYG F DENFI KHT PG+++MANSG +
Sbjct: 85 GYKGCQFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMANSGVN 144
Query: 148 SNGSQFYITTIKTSWLDGEHVVFGRVI-QGMDYVYAIEGGAGTYNGKPRKKVVITDSGEI 206
SNGSQF+IT K WLD +HVVFGRV+ GM V IE A N +P+ VI++ GE+
Sbjct: 145 SNGSQFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRPKLACVISECGEM 204
>Os08g0557500 Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of
Yarrowia lipolytica
Length = 154
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 97/159 (61%), Gaps = 13/159 (8%)
Query: 51 IGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVR 110
+G I + LY + PKTV NF C ++ +Y FHR+I GFMIQ GD +
Sbjct: 7 MGDIHLRLYPEECPKTVENFTTHC----------RNGYYDNLIFHRVIKGFMIQTGDPL- 55
Query: 111 GDGKGSESIYGGTFPDE-NFIVKHTHPGVIAMANSGPDSNGSQFYITTIKTSWLDGEHVV 169
GDG G +SI+G F DE + ++H P ++MAN+GP++NGSQF+ITT+ T WLD +H V
Sbjct: 56 GDGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTV 115
Query: 170 FGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIPK 208
FGRV++GMD V IE N KP + V I + +PK
Sbjct: 116 FGRVVKGMDVVQQIEKVKTDKNDKPYQDVKILNV-TVPK 153
>Os06g0130500 Similar to Cyclophilin-like protein PPIL3b
Length = 160
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 81/136 (59%), Gaps = 12/136 (8%)
Query: 50 HIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIV 109
++G I ++ D P+T NF ALC S +Y G+ FHR I GFMIQGGD
Sbjct: 8 NLGDIKCEVFCDQAPRTAENFLALCA----------SGYYDGTIFHRNIKGFMIQGGDPT 57
Query: 110 RGDGKGSESIYGGTFPDE-NFIVKHTHPGVIAMANSGPDSNGSQFYITTIKTSWLDGEHV 168
G GKG SI+G F DE +KH GV++MANSGP++NGSQF+IT K L+G +
Sbjct: 58 -GTGKGGTSIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYT 116
Query: 169 VFGRVIQGMDYVYAIE 184
VF +VI G + + +E
Sbjct: 117 VFAKVIHGFEVLDLME 132
>Os08g0559400 Similar to Cyclophilin-like protein
Length = 164
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 51 IGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVR 110
+G I +Y PKT NF L + +Y FHRII F++QGGD
Sbjct: 18 MGAFTIEMYYKHAPKTCRNFLELS----------RRGYYDNVIFHRIIKDFIVQGGDPT- 66
Query: 111 GDGKGSESIYGGTFPDE-NFIVKHTHPGVIAMANSGPDSNGSQFYITTIKTSWLDGEHVV 169
G G+G ESIYG F DE +KHT G+++MAN+GP++NGSQF+IT LDG+H +
Sbjct: 67 GTGRGGESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTI 126
Query: 170 FGRVIQGMDYV 180
FGRV +GM+ V
Sbjct: 127 FGRVSKGMEIV 137
>Os01g0582400 Similar to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase
Length = 499
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 74/125 (59%), Gaps = 13/125 (10%)
Query: 52 GRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVRG 111
G + I L+ PK V NF LC EG +Y G+ FHR+I F++QGGD G
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EG--------YYDGTLFHRVIKSFLVQGGDPT-G 70
Query: 112 DGKGSESIYGGTFPDE-NFIVKHTHPGVIAMANSG-PDSNGSQFYITTIKTSWLDGEHVV 169
G G ESIYG F DE + ++ H G++A AN+G P SNGSQF+I+ + WLD ++ +
Sbjct: 71 SGTGGESIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTI 130
Query: 170 FGRVI 174
FG+V
Sbjct: 131 FGKVT 135
>Os06g0670400
Length = 521
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 51 IGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVR 110
+G I + L+ D+ P T NF LC K +Y G FH+I F+ Q GD
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLC----------KMKYYNGCLFHKIEKDFLAQTGDST- 57
Query: 111 GDGKGSESIYGGTFPDE-NFIVKHTHP-------GVIAMANSGPDSNGSQFYITTIK-TS 161
G G G +S+Y + D+ F HP G IAMA++G + N SQFYIT
Sbjct: 58 GTGAGGDSVYKFLYGDQARFFDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVD 117
Query: 162 WLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVI 200
+LD +H VFG V +G D + I G+P K + I
Sbjct: 118 YLDDKHTVFGMVAEGFDTITKINETYVDDKGRPFKDIRI 156
>Os06g0670500 Similar to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase
Length = 564
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 51 IGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVR 110
+G I + L+ D+ P T NF LC K +Y G FH++ F+ Q GD
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLC----------KMKYYNGCLFHKVEKDFLAQTGDPT- 57
Query: 111 GDGKGSESIYGGTFPDENFI--------VKHTHPGVIAMANSGPDSNGSQFYIT-TIKTS 161
G G G +S+Y + D+ ++H+ G IAMA++G + N SQFYIT
Sbjct: 58 GTGAGGDSVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVD 117
Query: 162 WLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVI 200
+LD +H VFG V +G D + I G+P K + I
Sbjct: 118 YLDDKHTVFGMVAEGFDTLTKISETYVDDKGRPFKDIRI 156
>Os02g0111200
Length = 139
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Query: 58 LYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDIVRGDGKGSE 117
LY D+VP T NFRAL T K LHYKG + P ++G + +G
Sbjct: 3 LYADLVPLTAENFRALYTK--------KPLHYKGLCLSQHYPRIHVEGRRLRQGPWHRRR 54
Query: 118 SIYGGTFPDENFIVKHTHPGVIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGM 177
P+ENF++ H P + N ++N SQF+ + W DG +VVFG +I G
Sbjct: 55 VHLRRHLPNENFLLPHDRPW---LPNGSAENNISQFFT---RVPWFDGNYVVFGCIISGF 108
Query: 178 DYVYAIEG 185
+ AIE
Sbjct: 109 HNLKAIEA 116
>Os08g0292600 Peptidyl-prolyl cis-trans isomerase, cyclophilin type domain
containing protein
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 50/200 (25%)
Query: 36 VTNRVYLDVEI-------------------DGQHIGRIVIGLYGDVVPKTVANFRALCTG 76
+T+R+++D + D + +GR++ GLYG ++P T ANF+A CT
Sbjct: 91 ITDRIFMDFSVCPSYFRSDRTLGAELATCPDSEPLGRVIFGLYGRLLPLTTANFKAACT- 149
Query: 77 EEGIGHKGKSLHYKGSRFHRIIPG-FMI---QGGDIVRGDGKGSESIY--GGTFPDENFI 130
S Y+G+ H+++ G F + QG RG+ + + T + F
Sbjct: 150 ---------SAAYRGTLVHKLLQGQFFVAGRQGPRRDRGEVQPPTGLVRNAETIDPKAFE 200
Query: 131 VKHTHPGVIAMA----------NSGPDSNGSQFYITT--IKTSWLDGEHVVFGRVIQGMD 178
+KH PG +++ P+ + +F +TT LDG+++VFG V++GM+
Sbjct: 201 LKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGPGPCPELDGQNIVFGTVLEGMN 260
Query: 179 YVYAIEGGAGTYNGKPRKKV 198
+ +I TY KP +++
Sbjct: 261 VITSI-ATIPTY--KPAERI 277
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.141 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,024,441
Number of extensions: 391496
Number of successful extensions: 666
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 641
Number of HSP's successfully gapped: 18
Length of query: 215
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 118
Effective length of database: 11,971,043
Effective search space: 1412583074
Effective search space used: 1412583074
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 154 (63.9 bits)