BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0369000 Os09g0369000|AY305028
(291 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0369000 Similar to DRE binding factor 1 322 2e-88
Os08g0408500 Pathogenesis-related transcriptional factor an... 142 4e-34
Os02g0752800 Similar to Dehydration responsive element bind... 114 7e-26
Os03g0191900 Pathogenesis-related transcriptional factor an... 108 4e-24
Os04g0529100 Pathogenesis-related transcriptional factor an... 98 8e-21
Os02g0638650 Pathogenesis-related transcriptional factor an... 94 1e-19
AK061033 79 3e-15
Os06g0181700 Pathogenesis-related transcriptional factor an... 72 5e-13
Os02g0797100 Similar to Dehydration responsive element bind... 71 1e-12
Os02g0202000 Pathogenesis-related transcriptional factor an... 70 1e-12
Os04g0655700 70 2e-12
Os02g0231000 70 2e-12
Os10g0560700 Similar to Transcriptional factor TINY 69 3e-12
Os04g0549700 Similar to Dehydration responsive element bind... 69 4e-12
Os02g0657000 AP2 domain-containing protein Rap211 69 5e-12
Os06g0553700 67 1e-11
Os04g0648900 Similar to Dehydration responsive element bind... 67 1e-11
Os04g0398000 Pathogenesis-related transcriptional factor an... 67 1e-11
Os04g0550200 Pathogenesis-related transcriptional factor an... 67 1e-11
Os02g0656600 Similar to Dehydration responsive element bind... 67 1e-11
Os12g0168100 Similar to AP2 domain containing protein RAP2.... 66 3e-11
Os01g0165000 DRE binding protein 2 65 6e-11
>Os09g0369000 Similar to DRE binding factor 1
Length = 291
Score = 322 bits (825), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/291 (60%), Positives = 176/291 (60%)
Query: 1 MAAAIDLSGEELMRALEPFIRDASGSPPVCSQXXXXXXXXXXHAFAYGGGLAQQPELSPA 60
MAAAIDLSGEELMRALEPFIRDASGSPPVCSQ HAFAYGGGLAQQPELSPA
Sbjct: 1 MAAAIDLSGEELMRALEPFIRDASGSPPVCSQFSPTSPFSFPHAFAYGGGLAQQPELSPA 60
Query: 61 QMHYIXXXXXXXXXXXXXGPLGPRAQPMKXXXXXXXXXXXXXTPPRPQKLYRGVRQRHWG 120
QMHYI GPLGPRAQPMK TPPRPQKLYRGVRQRHWG
Sbjct: 61 QMHYIQARLHLQRQAAQAGPLGPRAQPMKASSSSASAAGAAATPPRPQKLYRGVRQRHWG 120
Query: 121 KWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFPDNAASRGPLHASV 180
KWVAEIRLPRNRTRLWLGTFDT GDAARLNFPDNAASRGPLHASV
Sbjct: 121 KWVAEIRLPRNRTRLWLGTFDTAEEAALAYDQAAYRLRGDAARLNFPDNAASRGPLHASV 180
Query: 181 DAKLQTLCQNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
DAKLQTLCQNI
Sbjct: 181 DAKLQTLCQNIAAAKNAKKSSVSASAAATSSAPTSNCSSPSSDDASSCLESADSSPSLSP 240
Query: 241 XXXXXXXXXXXXXXEMQQLDFSEAPWDEAAAFALTKYPSYEIDWDSLLAAN 291
EMQQLDFSEAPWDEAAAFALTKYPSYEIDWDSLLAAN
Sbjct: 241 SSAATTAETPATVPEMQQLDFSEAPWDEAAAFALTKYPSYEIDWDSLLAAN 291
>Os08g0408500 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 280
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 43 HAFAYGGGLAQQPELSPAQMHYIXXXXXXXXXXXXXGPLGPRAQPMKXXXXXXXXXXXXX 102
H F Y G +LSPAQ+ + LGPRAQPMK
Sbjct: 46 HGFHYMG----PAQLSPAQIQRVQAQLHMQRQAQSG--LGPRAQPMKPASAAAPAAAAAR 99
Query: 103 TPPRPQKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAA 162
QKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDT GDAA
Sbjct: 100 A----QKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALTYDQAAYRLRGDAA 155
Query: 163 RLNFPDNAASRGPLHASVDAKLQTLCQNI 191
RLNFPDNAASRGPL A+VDAKLQ +C I
Sbjct: 156 RLNFPDNAASRGPLDAAVDAKLQAICDTI 184
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 32/37 (86%)
Query: 255 EMQQLDFSEAPWDEAAAFALTKYPSYEIDWDSLLAAN 291
EM+QLDFSE PWDEA FALTKYPSYEIDWDSLL N
Sbjct: 243 EMEQLDFSEVPWDEAEGFALTKYPSYEIDWDSLLNNN 279
>Os02g0752800 Similar to Dehydration responsive element binding protein 2B
(DREB2B protein)
Length = 338
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 70/126 (55%), Gaps = 25/126 (19%)
Query: 81 LGPRAQPMKXXXXXXXXXXXXXTPPRP-----------QKLYRGVRQRHWGKWVAEIRLP 129
L PR QPMK +PPR KLYRGVRQRHWGKWVAEIRLP
Sbjct: 138 LRPRGQPMKQSG----------SPPRAGPFAAVAGAAQSKLYRGVRQRHWGKWVAEIRLP 187
Query: 130 RNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFPD----NAASRGPLHASVDAKLQ 185
+NRTRLWLGTFDT GD ARLNFP A GPLHASVDAKL
Sbjct: 188 KNRTRLWLGTFDTAEDAALAYDKAAFRLRGDLARLNFPTLRRGGAHLAGPLHASVDAKLT 247
Query: 186 TLCQNI 191
+CQ++
Sbjct: 248 AICQSL 253
>Os03g0191900 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 297
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 107 PQKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNF 166
P KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDT G++ARLNF
Sbjct: 108 PVKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDSAAFRLRGESARLNF 167
Query: 167 PD---NAASRG-PLHASVDAKLQTLCQNI 191
P+ A G PLHA+VDAKL +C +
Sbjct: 168 PELRRGGAHLGPPLHAAVDAKLHAICHGM 196
>Os04g0529100 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 377
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 47/66 (71%)
Query: 103 TPPRPQKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAA 162
PP PQKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDT G+ A
Sbjct: 118 VPPPPQKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENA 177
Query: 163 RLNFPD 168
RLNFPD
Sbjct: 178 RLNFPD 183
>Os02g0638650 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 473
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 47/70 (67%)
Query: 105 PRPQKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARL 164
P P KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDT G+ ARL
Sbjct: 220 PGPPKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARL 279
Query: 165 NFPDNAASRG 174
NFPD +G
Sbjct: 280 NFPDLFLGKG 289
>AK061033
Length = 109
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/37 (100%), Positives = 37/37 (100%)
Query: 255 EMQQLDFSEAPWDEAAAFALTKYPSYEIDWDSLLAAN 291
EMQQLDFSEAPWDEAAAFALTKYPSYEIDWDSLLAAN
Sbjct: 73 EMQQLDFSEAPWDEAAAFALTKYPSYEIDWDSLLAAN 109
>Os06g0181700 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 178
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 39/66 (59%)
Query: 106 RPQKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLN 165
RPQ+ YRGVRQRHWG WV+EIR P +TR+WLGTF+T G R N
Sbjct: 3 RPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCGPRVRTN 62
Query: 166 FPDNAA 171
FP + A
Sbjct: 63 FPHDVA 68
>Os02g0797100 Similar to Dehydration responsive element binding protein 2B
(DREB2B protein)
Length = 172
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 38/62 (61%)
Query: 106 RPQKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLN 165
RPQ+ YRGVRQRHWG WV+EIR P +TR+WLGTF+T G AR N
Sbjct: 3 RPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCGPRARTN 62
Query: 166 FP 167
FP
Sbjct: 63 FP 64
>Os02g0202000 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 205
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 42/76 (55%)
Query: 106 RPQKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLN 165
+P+K +RGVRQRHWG WV+EIR P + R+WLGTF+T G A+ N
Sbjct: 3 QPKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAVLMSGRNAKTN 62
Query: 166 FPDNAASRGPLHASVD 181
FP S G L + D
Sbjct: 63 FPVQRNSTGDLATAAD 78
>Os04g0655700
Length = 139
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 111 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFPDNA 170
Y+GVRQRHWG WVAEIR P +TR+WLGT+ T G AAR NFP ++
Sbjct: 4 YKGVRQRHWGSWVAEIRHPLLKTRIWLGTYGTAEDAARAYDEAARLMSGPAARTNFPLSS 63
Query: 171 A---SRGPLHASVDAKLQTLC 188
+ +R L ++ A+L+ C
Sbjct: 64 SGGNARSCLSPTLRARLEKCC 84
>Os02g0231000
Length = 247
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 38/62 (61%)
Query: 111 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFPDNA 170
YRGVR R WGKWV+EIR PR ++R+WLGTF T G AA LNFPD A
Sbjct: 46 YRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDAAALVVKGPAAVLNFPDMA 105
Query: 171 AS 172
AS
Sbjct: 106 AS 107
>Os10g0560700 Similar to Transcriptional factor TINY
Length = 289
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 37/61 (60%)
Query: 110 LYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFPDN 169
+YRGVR R WGKWV+EIR PR ++R+WLGTF T G AA LNFPD
Sbjct: 95 VYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTADMAARAHDVAALAIKGRAAHLNFPDL 154
Query: 170 A 170
A
Sbjct: 155 A 155
>Os04g0549700 Similar to Dehydration responsive element binding protein 1F
(DREB1F protein)
Length = 284
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 37/60 (61%)
Query: 111 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFPDNA 170
YRGVR+R WGKWV+EIR PR ++R+WLGTF T G A LNFPD+A
Sbjct: 118 YRGVRRRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGRNAHLNFPDSA 177
>Os02g0657000 AP2 domain-containing protein Rap211
Length = 225
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 106 RPQK-----LYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGD 160
RP+K YRGVR R WGKWV+EIR PR ++R+WLGTF T G
Sbjct: 40 RPRKDGHHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTFATAEMAARAHDVAALAIKGR 99
Query: 161 AARLNFPD 168
AA LNFPD
Sbjct: 100 AAHLNFPD 107
>Os06g0553700
Length = 263
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 37/62 (59%)
Query: 111 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFPDNA 170
YRGVR R WGKWV+EIR PR ++R+WLGTF T G AA LNFP A
Sbjct: 51 YRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDAAALVVKGPAAVLNFPGAA 110
Query: 171 AS 172
AS
Sbjct: 111 AS 112
>Os04g0648900 Similar to Dehydration responsive element binding protein 2F
(DREB2F protein)
Length = 233
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 38/66 (57%)
Query: 111 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFPDNA 170
YRGVR R WGKWVAEIR P RTR+WLG++ T G +ARLNFP+
Sbjct: 62 YRGVRMRKWGKWVAEIREPHKRTRIWLGSYATPVAAARAYDTAVFYLRGRSARLNFPEEI 121
Query: 171 ASRGPL 176
+S L
Sbjct: 122 SSLASL 127
>Os04g0398000 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 268
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 38/69 (55%)
Query: 108 QKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFP 167
++ YRGVRQR WGKW AEIR P+ R+WLGTFDT G A+LNFP
Sbjct: 64 RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAIAYDEAALRFKGTKAKLNFP 123
Query: 168 DNAASRGPL 176
+ R L
Sbjct: 124 ERVQGRTDL 132
>Os04g0550200 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 217
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 35/60 (58%)
Query: 111 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFPDNA 170
YRGVR R WGKWV+EIR PR ++R+WLGTF T G A LNFPD A
Sbjct: 47 YRGVRMRSWGKWVSEIREPRKKSRIWLGTFATAEMAARAHDVAALAIKGRTAHLNFPDLA 106
>Os02g0656600 Similar to Dehydration responsive element binding protein 2B
(DREB2B protein)
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 35/57 (61%)
Query: 111 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFP 167
YRGVR+R WGKWV+EIR PR ++R+WLGTF T G AA LNFP
Sbjct: 99 YRGVRRRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGRAAHLNFP 155
>Os12g0168100 Similar to AP2 domain containing protein RAP2.6 (Fragment)
Length = 341
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 36/62 (58%)
Query: 108 QKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAARLNFP 167
+K YRGVRQR WGKW AEIR P R+WLGTFDT G A+LNFP
Sbjct: 153 RKRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEDAARAYDGAALRFRGSRAKLNFP 212
Query: 168 DN 169
++
Sbjct: 213 EH 214
>Os01g0165000 DRE binding protein 2
Length = 274
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 35/68 (51%)
Query: 104 PPRPQKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXXGDAAR 163
P YRGVRQR WGKWVAEIR P RLWLG+F T G AR
Sbjct: 69 PENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTAR 128
Query: 164 LNFPDNAA 171
+NF DN+
Sbjct: 129 VNFADNST 136
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,679,279
Number of extensions: 192858
Number of successful extensions: 437
Number of sequences better than 1.0e-10: 34
Number of HSP's gapped: 445
Number of HSP's successfully gapped: 36
Length of query: 291
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 191
Effective length of database: 11,814,401
Effective search space: 2256550591
Effective search space used: 2256550591
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)