FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0797100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Dehydration responsive element binding protein 2B (DREB2B protein).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.99 (0.0303) R2 : 0.224
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 6.54 (0.574) R2dE : 0.221 R2E : 0.219
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.104 (0.0639) R2dN8 : 0.00578 R2N8 : 0.00289
σ : 0.57
deviance : 149.65
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 0.7548
memory length : 81
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.01
open length of G : 0.873

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
146.9 0.569 2.99 -0.292 0.0917 4.6 0.562 -20.5 0.0772 5.33 0.7921 93 7.95 0.95
148.64 0.568 2.99 -0.324 0.116 5.92 0.616 -- 0.0745 5.12 0.7797 93 7.97 0.936
147.59 0.566 2.99 -0.286 0.105 4.71 -- -19.1 0.0758 6.71 0.5 96 7.96 0.946
148.94 0.568 2.99 -0.252 0.0923 6.33 -- -- 0.0786 6.64 0.7732 93 7.95 0.94
148.15 0.567 2.99 -0.285 -- 4.77 -- -18.7 0.077 -- 0.494 96 7.95 0.926
189.08 0.645 3 -0.274 0.131 -- 0.436 -- 0.0544 6.13 -- -- -- --
189.34 0.644 3 -0.268 0.144 -- -- -- 0.0536 7.68 -- -- -- --
148.17 0.567 3 -0.237 -- 6.51 -- -- 0.0773 -- 0.4475 93 8.03 0.468
150.59 0.572 2.99 -- 0.0919 6.32 -- -- 0.105 6.69 0.78 93 7.95 0.95
190.46 0.645 3 -0.266 -- -- -- -- 0.0558 -- -- -- -- --
191.23 0.647 2.99 -- 0.142 -- -- -- 0.0835 7.81 -- -- -- --
149.65 0.57 2.99 -- -- 6.54 -- -- 0.104 -- 0.7548 81 8.01 0.873
192.33 0.647 2.99 -- -- -- -- -- 0.0853 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 147.66 wind 1 90 < th dose dependent rect. 8 1
2 152.17 wind 1 90 < th dose independent rect. 8 1
9 166.73 radiation 10 90 < th dose dependent rect. 8 3
14 168.79 radiation 10 90 < th dose independent rect. 9 2
16 169.20 radiation 10 90 < th dose dependent rect. 8 5
31 171.23 radiation 10 90 < th dose independent rect. 8 5
45 172.96 humidity 80 30 > th dose dependent rect. 9 1
56 173.46 radiation 10 90 < th dose independent rect. 8 7
133 176.61 radiation 10 270 < th dose independent rect. 7 20
153 177.14 wind 9 30 > th dose dependent sin 3 NA
191 177.84 wind 9 30 < th dose independent sin 0 NA
200 177.96 radiation 10 10 < th dose independent rect. 9 4
217 178.18 radiation 10 270 < th dose dependent rect. 6 22
222 178.24 wind 9 30 > th dose dependent rect. 11 1
245 178.31 humidity 80 10 > th dose independent rect. 10 1
285 178.58 wind 9 30 > th dose dependent rect. 11 5
322 178.75 wind 9 30 > th dose dependent rect. 15 21
329 178.81 wind 9 30 > th dose independent rect. 15 21
333 178.81 wind 9 30 > th dose dependent rect. 19 17
336 178.83 wind 9 30 < th dose independent no NA NA
350 178.91 wind 9 30 > th dose independent sin 1 NA
352 178.92 wind 9 30 > th dose dependent rect. 19 21
355 178.93 wind 9 30 > th dose independent rect. 11 9
390 179.14 wind 9 30 > th dose independent rect. 11 7
415 179.21 radiation 10 270 < th dose independent rect. 19 20
422 179.27 radiation 10 720 < th dose dependent rect. 22 15
423 179.28 wind 1 14400 < th dose dependent rect. 17 1
428 179.32 wind 9 30 > th dose dependent rect. 11 9
516 179.51 wind 9 30 > th dose independent rect. 11 1
582 179.57 wind 9 30 > th dose independent rect. 19 23
583 179.57 radiation 20 270 < th dose dependent rect. 19 20
602 179.62 wind 9 30 > th dose independent rect. 11 5
612 179.65 wind 9 30 > th dose dependent no NA NA
671 179.67 radiation 20 270 < th dose dependent rect. 20 17
802 179.89 wind 9 30 > th dose independent no NA NA
846 179.89 wind 9 30 > th dose independent rect. 17 23
866 179.94 radiation 20 720 < th dose dependent rect. 17 19
886 180.05 radiation 1 1440 < th dose independent rect. 18 9
888 180.06 radiation 1 1440 < th dose independent rect. 18 7
891 180.07 radiation 1 1440 < th dose independent rect. 18 5
904 180.08 radiation 1 1440 < th dose independent rect. 18 2
907 180.08 radiation 10 270 < th dose independent rect. 20 15
991 180.22 wind 9 720 > th dose dependent rect. 11 1