Os04g0549700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dehydration responsive element binding protein 1F (DREB1F protein).
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Os04g0549700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dehydration responsive element binding protein 1F (DREB1F protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 956.73 | 1.45 | 8.66 | -6.51 | 0.668 | 5.41 | 3.53 | -12.6 | -0.574 | 6.95 | 26.43 | 1234 | -- | -- |
| 1005.74 | 1.48 | 8.31 | -3.84 | 1.28 | 4.58 | 3.78 | -- | -0.0243 | 7.79 | 26.11 | 1126 | -- | -- |
| 980.23 | 1.46 | 8.66 | -6.41 | 0.889 | 5.61 | -- | -12.4 | -0.664 | 8.94 | 26.1 | 1190 | -- | -- |
| 1020.5 | 1.49 | 8.29 | -3.46 | 0.687 | 4.16 | -- | -- | 0.091 | 8.72 | 26.6 | 1232 | -- | -- |
| 1010.76 | 1.48 | 8.67 | -6.41 | -- | 5.31 | -- | -12 | -0.565 | -- | 26.44 | 1275 | -- | -- |
| 1672.43 | 1.92 | 8.26 | -2.21 | 0.748 | -- | 4.37 | -- | 0.206 | 5.37 | -- | -- | -- | -- |
| 1719.17 | 1.94 | 8.27 | -2.2 | 0.78 | -- | -- | -- | 0.185 | 4.81 | -- | -- | -- | -- |
| 1042.72 | 1.5 | 8.3 | -3.42 | -- | 4.02 | -- | -- | 0.134 | -- | 26.7 | 1280 | -- | -- |
| 1310.54 | 1.69 | 8.15 | -- | 0.638 | 3.41 | -- | -- | 0.72 | 8.07 | 27.8 | 1223 | -- | -- |
| 1751.36 | 1.96 | 8.28 | -2.17 | -- | -- | -- | -- | 0.205 | -- | -- | -- | -- | -- |
| 1847.13 | 2.01 | 8.22 | -- | 0.74 | -- | -- | -- | 0.43 | 4.9 | -- | -- | -- | -- |
| 1331.08 | 1.7 | 8.16 | -- | -- | 3.33 | -- | -- | 0.734 | -- | 27.9 | 1264 | -- | -- |
| 1876.05 | 2.02 | 8.22 | -- | -- | -- | -- | -- | 0.446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 972.10 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 3 | 976.70 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 6 | 978.51 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 9 | 979.00 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 14 |
| 10 | 979.41 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 16 |
| 26 | 982.71 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 35 | 984.76 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 44 | 985.63 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 50 | 987.41 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 58 | 988.66 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 16 |
| 84 | 990.65 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 121 | 993.19 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 132 | 994.73 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 172 | 997.35 | humidity | 90 | 1440 | < th | dose dependent | sin | 21 | NA |
| 263 | 1004.68 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 12 |
| 270 | 1004.93 | temperature | 25 | 1440 | > th | dose dependent | sin | 22 | NA |
| 280 | 1005.42 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 286 | 1005.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 296 | 1005.97 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 9 |
| 306 | 1006.31 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 7 |
| 314 | 1006.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 9 |
| 331 | 1006.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 14 |
| 332 | 1007.06 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 353 | 1007.59 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 429 | 1009.53 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 21 |
| 465 | 1010.46 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 485 | 1010.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 498 | 1011.19 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 520 | 1011.67 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 547 | 1012.43 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 563 | 1013.18 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 580 | 1013.55 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 603 | 1014.62 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 645 | 1015.86 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 661 | 1016.33 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 677 | 1016.99 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 6 |
| 682 | 1017.27 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 748 | 1020.20 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 872 | 1024.02 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 958 | 1027.04 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 23 |