Os04g0648900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dehydration responsive element binding protein 2F (DREB2F protein).
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Os04g0648900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dehydration responsive element binding protein 2F (DREB2F protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.61 | 0.541 | 10.1 | 0.996 | 1.62 | -1.74 | -2.55 | -0.967 | 0.59 | 23.5 | 21.61 | 9 | -- | -- |
| 132.42 | 0.54 | 10.1 | 1.16 | 1.6 | -1.84 | -2.33 | -- | 0.634 | 23.5 | 21.9 | 10 | -- | -- |
| 152.75 | 0.58 | 10 | 1.55 | 1.61 | -1.94 | -- | 1.92 | 0.73 | 23.4 | 22 | 10 | -- | -- |
| 155.7 | 0.585 | 10.1 | 1.24 | 1.63 | -1.79 | -- | -- | 0.636 | 23.4 | 21.9 | 6 | -- | -- |
| 282.27 | 0.787 | 9.92 | 1.96 | -- | -3.13 | -- | 2.74 | 0.976 | -- | 21.32 | 6 | -- | -- |
| 186.35 | 0.64 | 10.1 | 0.81 | 2.14 | -- | -2.07 | -- | 0.341 | 0.278 | -- | -- | -- | -- |
| 204.95 | 0.67 | 10.1 | 0.891 | 2.15 | -- | -- | -- | 0.35 | 0.289 | -- | -- | -- | -- |
| 288.72 | 0.795 | 9.97 | 1.52 | -- | -2.98 | -- | -- | 0.848 | -- | 21.1 | 7 | -- | -- |
| 193.6 | 0.652 | 10.1 | -- | 1.75 | -1.41 | -- | -- | 0.426 | 23.6 | 23 | 6 | -- | -- |
| 496.06 | 1.04 | 10.1 | 0.962 | -- | -- | -- | -- | 0.384 | -- | -- | -- | -- | -- |
| 225.85 | 0.703 | 10.1 | -- | 2.16 | -- | -- | -- | 0.251 | 0.311 | -- | -- | -- | -- |
| 346.93 | 0.87 | 10 | -- | -- | -2.66 | -- | -- | 0.632 | -- | 21.47 | 6 | -- | -- |
| 520.46 | 1.06 | 10.1 | -- | -- | -- | -- | -- | 0.277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 129.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 5 | 131.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 7 | 131.04 | temperature | 25 | 90 | < th | dose independent | rect. | 13 | 8 |
| 10 | 131.94 | temperature | 25 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 31 | 133.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 36 | 134.02 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 43 | 134.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 17 |
| 44 | 134.61 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 45 | 134.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 50 | 135.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 52 | 135.17 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 68 | 135.31 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 86 | 135.45 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 100 | 135.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 116 | 135.91 | temperature | 25 | 720 | > th | dose dependent | sin | 23 | NA |
| 161 | 136.29 | temperature | 25 | 720 | > th | dose dependent | rect. | 10 | 6 |
| 163 | 136.34 | temperature | 20 | 10 | > th | dose dependent | sin | 18 | NA |
| 199 | 137.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 220 | 137.34 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 10 |
| 222 | 137.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 253 | 137.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 285 | 137.96 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 14 |
| 290 | 138.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 301 | 138.22 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 313 | 138.32 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 334 | 138.59 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 421 | 139.26 | temperature | 25 | 1440 | > th | dose dependent | sin | 5 | NA |
| 433 | 139.32 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 451 | 139.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 465 | 139.45 | temperature | 30 | 10 | < th | dose dependent | sin | 19 | NA |
| 476 | 139.50 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 506 | 139.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 518 | 139.69 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 613 | 140.16 | temperature | 30 | 1440 | < th | dose independent | sin | 6 | NA |
| 629 | 140.30 | temperature | 30 | 1440 | > th | dose independent | sin | 6 | NA |
| 632 | 140.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 659 | 140.38 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 702 | 140.68 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 14 |
| 707 | 140.70 | temperature | 25 | 30 | < th | dose independent | sin | 18 | NA |
| 732 | 140.89 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 736 | 140.91 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 822 | 141.16 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 872 | 141.25 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |