BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0625700 Os06g0625700|J065104E05
(213 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0625700 Conserved hypothetical protein 445 e-125
Os02g0192500 Similar to Cellulose synthase-like protein (Fr... 308 2e-84
Os03g0377700 Cellulose synthase-like A5 233 6e-62
Os07g0630900 Conserved hypothetical protein 226 6e-60
Os10g0406400 Conserved hypothetical protein 218 3e-57
Os03g0770800 CSLC9 193 9e-50
Os07g0124750 191 4e-49
Os09g0428000 Glycosyl transferase, family 2 domain containi... 190 6e-49
Os08g0253800 Glycosyl transferase, family 2 domain containi... 187 3e-48
Os03g0169500 Similar to Cellulose synthase-like A4 173 6e-44
Os09g0572500 Similar to Beta-1,4-mannan synthase 172 2e-43
Os06g0230100 Glycosyl transferase, family 2 domain containi... 144 3e-35
Os08g0434500 Conserved hypothetical protein 90 1e-18
Os09g0439100 Similar to Cellulose synthase-like A4 89 2e-18
Os05g0510800 Conserved hypothetical protein 87 8e-18
>Os06g0625700 Conserved hypothetical protein
Length = 213
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 FKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYL 60
FKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYL
Sbjct: 1 FKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYL 60
Query: 61 GDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVR 120
GDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVR
Sbjct: 61 GDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVR 120
Query: 121 KIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRCQIFSIALQFY 180
KIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRCQIFSIALQFY
Sbjct: 121 KIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRCQIFSIALQFY 180
Query: 181 FQNMNPTYSTQPTVLLPELCSSEQPKNLHENMQ 213
FQNMNPTYSTQPTVLLPELCSSEQPKNLHENMQ
Sbjct: 181 FQNMNPTYSTQPTVLLPELCSSEQPKNLHENMQ 213
>Os02g0192500 Similar to Cellulose synthase-like protein (Fragment)
Length = 521
Score = 308 bits (790), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 144/198 (72%), Positives = 170/198 (85%), Gaps = 7/198 (3%)
Query: 1 FKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYL 60
F VEQEV SS AFFGFNGTAGVWR+SA+NEAGGWKDRTTVEDMDLA+RA LKGWKFVYL
Sbjct: 234 FTVEQEVSSSVCAFFGFNGTAGVWRVSAVNEAGGWKDRTTVEDMDLAIRASLKGWKFVYL 293
Query: 61 GDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVR 120
GD+ VKSELPSTFKAFR+QQHRWSCGPANLFRKML+EI NKKVT+WKKI+VIYNFFL+R
Sbjct: 294 GDVQVKSELPSTFKAFRFQQHRWSCGPANLFRKMLMEIVRNKKVTIWKKIHVIYNFFLIR 353
Query: 121 KIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRCQIFSIALQFY 180
KII HIVTF FYCL++PAT+ +PEV IP+WG VY+P+I+T+LNS+GTPR S L F+
Sbjct: 354 KIIAHIVTFAFYCLIIPATIFVPEVRIPKWGCVYIPTIITLLNSVGTPR----SFHLLFF 409
Query: 181 ---FQNMNPTYSTQPTVL 195
F+N+ + T+ T++
Sbjct: 410 WILFENVMSLHRTKATLI 427
>Os03g0377700 Cellulose synthase-like A5
Length = 574
Score = 233 bits (595), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 145/194 (74%), Gaps = 1/194 (0%)
Query: 1 FKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYL 60
FK EQE GS+T AFF FNGTAGVWR A+N+AGGWKDRTTVEDMDLAVRA LKGWKF+YL
Sbjct: 284 FKAEQEAGSATFAFFSFNGTAGVWRTEAINDAGGWKDRTTVEDMDLAVRATLKGWKFIYL 343
Query: 61 GDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVR 120
GDL VKSELPST+KA+ QQ RWSCG ANLFRKM+ ++ KKV+ KKIY++Y+FFLVR
Sbjct: 344 GDLRVKSELPSTYKAYCRQQFRWSCGGANLFRKMIWDVLVAKKVSSLKKIYILYSFFLVR 403
Query: 121 KIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRCQIFSIALQFY 180
+++ V F+ Y +++P +V+IPE+ +P WG Y+P+ + I+ +I P + ++ L
Sbjct: 404 RVVAPAVAFILYNVIIPVSVMIPELFLPIWGVAYIPTALLIVTAIRNPE-NLHTVPLWIL 462
Query: 181 FQNMNPTYSTQPTV 194
F+++ + + V
Sbjct: 463 FESVMSMHRLRAAV 476
>Os07g0630900 Conserved hypothetical protein
Length = 320
Score = 226 bits (577), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 133/169 (78%)
Query: 1 FKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYL 60
FKVEQE GS+T AFF FNGTAGVWR +A+NEAGGWKDRTTVEDMDLAVRA L GWKF+Y+
Sbjct: 34 FKVEQEAGSATFAFFSFNGTAGVWRTTAINEAGGWKDRTTVEDMDLAVRASLNGWKFIYV 93
Query: 61 GDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVR 120
GD+ VKSELPST+ A+ QQ RW+CG ANLFRK+ +++ K ++L KK Y++Y+FFLVR
Sbjct: 94 GDIRVKSELPSTYGAYCRQQFRWACGGANLFRKIAMDVLVAKDISLLKKFYMLYSFFLVR 153
Query: 121 KIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPR 169
+++ +V V Y ++VP +V+IPE+ IP WG Y+P + I+ +I PR
Sbjct: 154 RVVAPMVACVLYNIIVPLSVMIPELFIPIWGVAYIPMALLIITTIRNPR 202
>Os10g0406400 Conserved hypothetical protein
Length = 264
Score = 218 bits (554), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 93/144 (64%), Positives = 125/144 (86%)
Query: 25 RISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYLGDLMVKSELPSTFKAFRYQQHRWS 84
R+SA+N++GGWKDRTTVEDMDLAVRA LKGW+F+Y+GD+ VKSELPSTF+A+R+QQHRW+
Sbjct: 1 RVSAINQSGGWKDRTTVEDMDLAVRASLKGWEFLYVGDIRVKSELPSTFQAYRHQQHRWT 60
Query: 85 CGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVRKIIGHIVTFVFYCLVVPATVLIPE 144
CG ANLFRKM EI TNK+V++WKK +++Y+FF VR+ I I+TF+FYC+V+P + ++PE
Sbjct: 61 CGAANLFRKMAWEIITNKEVSMWKKYHLLYSFFFVRRAIAPILTFLFYCIVIPLSAMVPE 120
Query: 145 VEIPRWGYVYLPSIVTILNSIGTP 168
V IP WG VY+P+ +TI+N+I P
Sbjct: 121 VTIPVWGLVYIPTAITIMNAIRNP 144
>Os03g0770800 CSLC9
Length = 596
Score = 193 bits (490), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 129/187 (68%), Gaps = 1/187 (0%)
Query: 1 FKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYL 60
F+VEQ+V FFGFNGTAGVWRI A++++GGW +RTTVEDMD+AVRA L+GWKF++L
Sbjct: 289 FEVEQQVNGIFLNFFGFNGTAGVWRIKALDDSGGWMERTTVEDMDIAVRAHLRGWKFIFL 348
Query: 61 GDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVR 120
D+ + ELP +++A+R QQHRW GP LFR L +I K+ WKK +I+ FFL+R
Sbjct: 349 NDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDI-IKCKIVFWKKANLIFLFFLLR 407
Query: 121 KIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRCQIFSIALQFY 180
K+I +F +C+++P T+ +PE E+P W Y+P+++++LN + +P+ F I +
Sbjct: 408 KLILPFYSFTLFCIILPMTMFVPEAELPDWVVCYIPALMSLLNILPSPKSFPFIIPYLLF 467
Query: 181 FQNMNPT 187
M+ T
Sbjct: 468 ENTMSVT 474
>Os07g0124750
Length = 686
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 125/187 (66%), Gaps = 1/187 (0%)
Query: 1 FKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYL 60
F+VEQ+V FFGFNGTAGVWRI A+ ++GGW +RTTVEDMD+AVRA L GWKFV+L
Sbjct: 378 FEVEQQVNGIFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLNGWKFVFL 437
Query: 61 GDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVR 120
D+ + ELP +++A+R QQHRW GP LFR L +I K+ WKK +I+ FFL+R
Sbjct: 438 NDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDI-IRCKIAFWKKANLIFLFFLLR 496
Query: 121 KIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRCQIFSIALQFY 180
K+I +F +C+++P T+ IPE E+P W Y+P++++ LN + P+ F I +
Sbjct: 497 KLILPFYSFTLFCIILPMTMFIPEAELPDWVVCYIPALMSFLNILPAPKSFPFIIPYLLF 556
Query: 181 FQNMNPT 187
M+ T
Sbjct: 557 ENTMSVT 563
>Os09g0428000 Glycosyl transferase, family 2 domain containing protein
Length = 485
Score = 190 bits (483), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 126/187 (67%), Gaps = 1/187 (0%)
Query: 1 FKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYL 60
F+VEQ+V FFGFNGTAGVWRI A+ E+GGW +RTTVEDMD+AVRA L GWKF++L
Sbjct: 170 FEVEQQVNGVFLNFFGFNGTAGVWRIQALEESGGWLERTTVEDMDIAVRAHLNGWKFIFL 229
Query: 61 GDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVR 120
D+ V ELP +++A+R QQHRW GP +LFR L +I T K++ WKK +I FFL+R
Sbjct: 230 NDVKVLCELPESYEAYRKQQHRWHSGPMHLFRLCLPDILT-AKISSWKKANLILLFFLLR 288
Query: 121 KIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRCQIFSIALQFY 180
K+I +F +C+++P T+ +PE E+P W Y+P ++ LN + +PR F + +
Sbjct: 289 KLILPFYSFTLFCVILPLTMFVPEAELPVWVICYVPVCMSFLNILPSPRSFPFIVPYLLF 348
Query: 181 FQNMNPT 187
M+ T
Sbjct: 349 ENTMSVT 355
>Os08g0253800 Glycosyl transferase, family 2 domain containing protein
Length = 482
Score = 187 bits (476), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 126/187 (67%), Gaps = 1/187 (0%)
Query: 1 FKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYL 60
F+VEQ+V +FFGFNGTAGVWRI A+ ++GGW +RTTVEDMD+AVRA L GWKF++L
Sbjct: 148 FEVEQQVNGVYLSFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLNGWKFIFL 207
Query: 61 GDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVR 120
D+ V ELP +++A+R QQHRW GP LFR L + + K++ WKK ++ FFL+R
Sbjct: 208 NDVKVLCELPESYQAYRKQQHRWHSGPMQLFRLCLPAVFKS-KISTWKKANLVMLFFLLR 266
Query: 121 KIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRCQIFSIALQFY 180
K+I +F +C+++P T+ +PE E+P W Y+P I+++LN + P+ F I +
Sbjct: 267 KLILPFYSFTLFCVILPLTMFVPEAELPIWVICYVPVIMSVLNILPAPKSFPFVIPYLLF 326
Query: 181 FQNMNPT 187
M+ T
Sbjct: 327 ENTMSVT 333
>Os03g0169500 Similar to Cellulose synthase-like A4
Length = 624
Score = 173 bits (439), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 128/217 (58%), Gaps = 53/217 (24%)
Query: 1 FKVEQEVGSSTHAFFGFNG------------------------TAGVWRISAMNEAGGWK 36
FKVEQE GSS H+FFGFNG TAGVWR+SA+NEAGGWK
Sbjct: 262 FKVEQESGSSMHSFFGFNGKIQYQNYLHELFMPGPNIADLPTGTAGVWRVSAINEAGGWK 321
Query: 37 DRTTVEDMDLAVRAGLKGWKFVYLGDLMVKSE-----------------------LPSTF 73
DRTTVEDMDLAVRA LKGW+F+ + V S+ LP T
Sbjct: 322 DRTTVEDMDLAVRASLKGWQFLLRVNSQVPSKPTDISSIDGLVVLPTSSEKWQRKLPKTR 381
Query: 74 KAF--RYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVRKIIGHIVTFVF 131
+AF +H N F ++ V + V++WKK++++Y+FF VR+++ I+TF+F
Sbjct: 382 QAFFNDRMEHVTGLSCNNFFTRLYV----IQGVSVWKKLHLLYSFFFVRRVVAPILTFLF 437
Query: 132 YCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTP 168
YC+V+P +V++PEV IP WG VY+P+ +TI+N+I P
Sbjct: 438 YCVVIPLSVMVPEVSIPVWGMVYIPTAITIMNAIRNP 474
>Os09g0572500 Similar to Beta-1,4-mannan synthase
Length = 541
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 73/97 (75%), Positives = 88/97 (90%)
Query: 1 FKVEQEVGSSTHAFFGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYL 60
F+VEQEVGS+ H FFGFNGTAGVWR+ A+ EAGGWK+RTTVEDMDLAVRA L+GW+FVY+
Sbjct: 235 FRVEQEVGSACHGFFGFNGTAGVWRVRALEEAGGWKERTTVEDMDLAVRASLRGWRFVYV 294
Query: 61 GDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVE 97
G + V++ELPST +A+RYQQHRWSCGPANLFRK+ +E
Sbjct: 295 GHVGVRNELPSTLRAYRYQQHRWSCGPANLFRKIFLE 331
>Os06g0230100 Glycosyl transferase, family 2 domain containing protein
Length = 506
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 75/88 (85%), Gaps = 1/88 (1%)
Query: 19 GTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYLGDLMVKSELPSTFKAFRY 78
GTAGVWRISA+ EAGGWKDRTTVEDMDLAVRAGLKGWKFVYL D+ VKSELPS K +R+
Sbjct: 306 GTAGVWRISALEEAGGWKDRTTVEDMDLAVRAGLKGWKFVYLADVKVKSELPSNLKTYRH 365
Query: 79 QQHRWSCGPANLFRKMLVEIATNKKVTL 106
QQHRW+CG ANLFRK+ EI KVTL
Sbjct: 366 QQHRWTCGAANLFRKVGAEILFT-KVTL 392
>Os08g0434500 Conserved hypothetical protein
Length = 77
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 47/51 (92%)
Query: 15 FGFNGTAGVWRISAMNEAGGWKDRTTVEDMDLAVRAGLKGWKFVYLGDLMV 65
F +GTAGVWRI+A+++AGGWKDRTTVEDMDLAVRA L+GWKFVY+GD+ V
Sbjct: 21 FHLSGTAGVWRIAAIDDAGGWKDRTTVEDMDLAVRATLQGWKFVYVGDVKV 71
>Os09g0439100 Similar to Cellulose synthase-like A4
Length = 94
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 63/86 (73%), Gaps = 3/86 (3%)
Query: 83 WSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVRKIIGHIVTFVFYCLVVPATVLI 142
W C P +K EIA NK V++WKK++++Y+FF VR+++ I+TF+FY +V+P +V++
Sbjct: 4 WYCQP---LQKNATEIAKNKGVSVWKKLHLLYSFFFVRRVVAPILTFLFYRVVIPLSVMV 60
Query: 143 PEVEIPRWGYVYLPSIVTILNSIGTP 168
PE+ IP WG V +P+ +TI+N+I P
Sbjct: 61 PEISIPVWGMVCIPTAITIMNAIRNP 86
>Os05g0510800 Conserved hypothetical protein
Length = 252
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 58 VYLGDLMVKSELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFF 117
V+L D+ + ELP +++A+R QQHRW GP LFR V+I K+ WKK +I+ FF
Sbjct: 1 VFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCFVDI-IKSKIGFWKKFNLIFLFF 59
Query: 118 LVRKIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRCQIFSIAL 177
L+RK+I +F +C+++P T+ +PE E+P W Y+P+ ++ILN + P+ F +
Sbjct: 60 LLRKLILPFYSFTLFCVILPMTMFVPEAELPAWVVCYIPATMSILNILPAPKSFPFIVPY 119
Query: 178 QFYFQNMNPT 187
+ M+ T
Sbjct: 120 LLFENTMSVT 129
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.139 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,192,893
Number of extensions: 275382
Number of successful extensions: 715
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 708
Number of HSP's successfully gapped: 15
Length of query: 213
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 116
Effective length of database: 11,971,043
Effective search space: 1388640988
Effective search space used: 1388640988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 154 (63.9 bits)