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Os03g0377700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cellulose synthase-like A5.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.92 (0.0291) R2 : 0.877
β1 : -- (--) R2dD : -- R2D : --
β2 : 7.06 (0.167) R2dC : 2.36 R2C : 0.32
β3 : -2.89 (0.141) R2dE : 0.557 R2E : -1.48
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.035 (0.0614) R2dN8 : 7.76e-05 R2N8 : -0.0056
σ : 0.546
deviance : 137.45
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_____
C
peak time of C : 16.8
E
wheather : temperature
threshold : 15.42
memory length : 256
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 10.5
open length of G : 10.8

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
124.72 0.525 7.91 -0.157 7.23 -2.97 -4.74 3.49 0.0332 16.7 15 273 10.1 11
135.24 0.542 7.9 -0.172 6.49 -2.35 -1.34 -- 0.00168 16.6 17.9 262 10.3 11.1
137.91 0.547 7.94 -0.199 6.85 -2.74 -- 0.293 -0.00166 16.8 16.38 234 10.7 10.8
136.58 0.544 7.93 -0.215 6.95 -2.83 -- -- 0.00129 16.8 15.4 258 10.5 10.7
237.28 0.717 7.72 -0.801 -- -2.61 -- 0.38 -0.043 -- 14.51 1271 10.5 11.9
175.36 0.621 7.88 -0.312 4.1 -- -1.26 -- -0.105 15.7 -- -- -- --
180.15 0.629 7.88 -0.332 4.1 -- -- -- -0.113 15.7 -- -- -- --
195.64 0.651 7.85 -0.376 -- -3.18 -- -- -0.0706 -- 14.5 1184 11.3 12
137.45 0.546 7.92 -- 7.06 -2.89 -- -- 0.035 16.8 15.42 256 10.5 10.8
1110.85 1.56 7.88 -0.503 -- -- -- -- -0.222 -- -- -- -- --
183.05 0.633 7.87 -- 4.1 -- -- -- -0.0756 15.7 -- -- -- --
182.67 0.629 7.84 -- -- -3.77 -- -- -0.051 -- -8.159 972 13.3 12.3
1117.52 1.56 7.86 -- -- -- -- -- -0.166 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 125.78 temperature 15.0 270 > th dose independent rect. 10 11
3 130.27 temperature 15.0 270 > th dose independent rect. 17 13
4 132.54 temperature 15.0 270 > th dose independent rect. 9 22
6 132.79 atmosphere 1010.0 270 < th dose independent rect. 11 10
9 134.43 temperature 15.0 270 > th dose independent rect. 24 23
10 134.44 temperature 15.0 270 > th dose independent rect. 11 19
15 135.52 humidity 50.0 270 > th dose independent rect. 11 10
16 135.64 atmosphere 1010.0 270 < th dose independent rect. 10 21
17 135.77 temperature 15.0 720 > th dose independent rect. 9 14
18 135.86 atmosphere 1010.0 270 < th dose independent rect. 11 19
19 136.02 atmosphere 1015.0 1440 < th dose independent rect. 3 6
28 137.04 temperature 15.0 720 > th dose independent rect. 18 5
32 137.51 wind 1.0 270 > th dose independent rect. 21 13
39 137.99 temperature 15.0 720 > th dose independent rect. 9 6
40 137.99 temperature 30.0 270 < th dose independent rect. 15 15
42 138.22 atmosphere 1010.0 270 < th dose independent rect. 16 14
49 138.48 atmosphere 1010.0 90 < th dose independent rect. 13 18
56 138.69 temperature 15.0 720 > th dose independent rect. 17 22
58 138.73 temperature 15.0 720 > th dose independent rect. 18 20
61 138.83 humidity 50.0 270 > th dose independent rect. 15 15
62 138.85 humidity 90.0 720 < th dose independent rect. 11 2
65 138.90 temperature 15.0 270 > th dose independent rect. 4 23
69 139.06 atmosphere 1010.0 720 < th dose independent rect. 18 5
74 139.41 temperature 30.0 270 < th dose independent rect. 21 13
78 139.53 atmosphere 995.0 270 > th dose dependent rect. 21 13
83 139.62 wind 9.0 270 < th dose independent rect. 21 13
85 139.63 temperature 10.0 270 > th dose independent rect. 21 13
86 139.63 atmosphere 995.0 270 > th dose independent rect. 21 13
91 139.82 humidity 50.0 270 > th dose independent rect. 21 13
92 139.83 precipitation 0.1 270 < th dose independent rect. 21 13
93 139.83 precipitation 0.1 270 < th dose dependent rect. 21 13
97 140.09 atmosphere 1010.0 10 < th dose independent rect. 12 20
116 140.73 atmosphere 995.0 10 > th dose dependent rect. 23 13
125 140.87 wind 1.0 270 > th dose independent rect. 5 21
127 140.98 temperature 15.0 10 > th dose independent rect. 12 20
132 141.04 atmosphere 995.0 720 > th dose dependent rect. 23 2
134 141.21 atmosphere 1010.0 720 < th dose independent rect. 11 2
135 141.21 radiation 30.0 270 < th dose dependent rect. 16 14
144 141.32 wind 1.0 270 > th dose independent rect. 6 19
154 141.50 humidity 50.0 270 > th dose independent rect. 1 20
156 141.53 temperature 15.0 1440 > th dose independent rect. 4 5
172 141.85 wind 9.0 270 < th dose independent rect. 10 11
180 141.96 atmosphere 995.0 270 > th dose independent rect. 11 10
204 142.38 atmosphere 1015.0 90 < th dose dependent rect. 3 4
207 142.44 atmosphere 1010.0 30 < th dose independent rect. 3 5
216 142.63 temperature 15.0 10 > th dose independent rect. 18 14
219 142.63 atmosphere 1015.0 270 < th dose dependent rect. 3 1
233 142.86 temperature 15.0 720 > th dose independent rect. 3 19
234 142.87 humidity 50.0 270 > th dose independent rect. 11 19
243 142.99 precipitation 0.1 270 < th dose independent rect. 10 11
244 142.99 precipitation 0.1 270 < th dose dependent rect. 10 11
248 143.10 atmosphere 995.0 10 > th dose dependent rect. 12 11
251 143.12 wind 1.0 90 > th dose independent rect. 23 13
254 143.14 atmosphere 1010.0 270 < th dose independent rect. 1 21
265 143.28 radiation 10.0 270 < th dose dependent rect. 1 7
269 143.31 radiation 40.0 10 < th dose independent rect. 3 5
295 143.45 radiation 20.0 270 < th dose independent rect. 16 14
298 143.49 atmosphere 1010.0 90 < th dose independent rect. 3 20
304 143.56 wind 9.0 10 < th dose independent rect. 3 5
305 143.56 temperature 10.0 10 > th dose independent rect. 3 5
307 143.56 temperature 30.0 10 < th dose independent rect. 3 5
308 143.56 humidity 50.0 10 > th dose independent rect. 3 5
310 143.56 atmosphere 995.0 10 > th dose independent rect. 3 5
312 143.56 temperature 10.0 10 > th dose independent rect. 8 19
317 143.60 wind 9.0 270 < th dose independent rect. 3 1
318 143.60 temperature 10.0 270 > th dose independent rect. 3 1
320 143.60 temperature 30.0 270 < th dose independent rect. 3 1
321 143.60 humidity 50.0 270 > th dose independent rect. 3 1
324 143.60 atmosphere 995.0 270 > th dose independent rect. 3 1
325 143.60 atmosphere 1010.0 270 < th dose independent rect. 3 1
327 143.60 radiation 1.0 270 < th dose independent rect. 3 1
334 143.60 radiation 1.0 270 < th dose dependent rect. 3 1
349 143.68 precipitation 0.1 270 < th dose independent rect. 5 21
351 143.68 precipitation 0.1 270 < th dose dependent rect. 5 21
353 143.71 humidity 50.0 43200 > th dose independent rect. 24 4
356 143.71 wind 9.0 10 < th dose independent rect. 8 19
362 143.81 atmosphere 1010.0 270 < th dose independent rect. 1 5
366 143.82 precipitation 0.1 30 < th dose independent rect. 3 5
367 143.82 precipitation 0.1 30 < th dose dependent rect. 3 5
368 143.83 precipitation 0.1 270 < th dose independent rect. 6 19
369 143.83 precipitation 0.1 270 < th dose dependent rect. 6 19
382 143.85 radiation 40.0 90 < th dose dependent rect. 3 5
384 143.87 temperature 15.0 90 > th dose independent rect. 3 20
395 143.93 atmosphere 1005.0 90 > th dose dependent rect. 23 12
401 143.98 wind 9.0 270 < th dose independent rect. 5 21
405 144.02 precipitation 0.1 30 < th dose independent rect. 8 19
406 144.02 precipitation 0.1 30 < th dose dependent rect. 8 19
407 144.03 atmosphere 995.0 720 > th dose dependent rect. 21 5
411 144.04 humidity 50.0 270 > th dose independent rect. 10 21
416 144.10 temperature 15.0 1440 > th dose independent rect. 4 13
424 144.11 wind 9.0 270 < th dose independent rect. 6 19
426 144.14 radiation 1.0 270 < th dose independent rect. 2 3
429 144.14 radiation 10.0 270 < th dose dependent rect. 2 3
430 144.15 radiation 10.0 90 < th dose independent rect. 3 6
436 144.15 humidity 50.0 10 > th dose dependent rect. 3 5
438 144.16 wind 9.0 270 < th dose independent rect. 2 3
439 144.16 temperature 10.0 270 > th dose independent rect. 2 3
441 144.16 temperature 30.0 270 < th dose independent rect. 2 3
442 144.16 humidity 50.0 270 > th dose independent rect. 2 3
445 144.16 atmosphere 995.0 270 > th dose independent rect. 2 3
451 144.16 radiation 10.0 270 < th dose independent rect. 1 5
453 144.16 temperature 10.0 270 > th dose independent rect. 5 21
465 144.26 atmosphere 1015.0 10 < th dose dependent rect. 3 5
472 144.29 temperature 10.0 270 > th dose independent rect. 1 5
474 144.29 temperature 30.0 270 < th dose independent rect. 1 5
475 144.29 humidity 50.0 270 > th dose independent rect. 1 5
478 144.29 atmosphere 995.0 270 > th dose independent rect. 1 5
483 144.29 temperature 10.0 270 > th dose independent rect. 6 19
487 144.31 wind 9.0 270 < th dose independent rect. 1 5
490 144.32 humidity 90.0 720 < th dose independent rect. 10 4
491 144.33 wind 9.0 270 < th dose dependent rect. 3 1
496 144.36 wind 1.0 270 > th dose independent rect. 11 10
504 144.41 wind 9.0 270 < th dose independent rect. 4 23
542 144.56 precipitation 0.1 270 < th dose independent rect. 6 11
544 144.56 atmosphere 995.0 270 > th dose independent rect. 17 13
547 144.56 precipitation 0.1 270 < th dose dependent rect. 6 11
549 144.58 precipitation 0.1 270 < th dose independent rect. 3 1
553 144.58 precipitation 0.1 270 < th dose dependent rect. 3 1
568 144.71 precipitation 0.1 270 < th dose independent rect. 1 5
571 144.71 precipitation 0.1 270 < th dose dependent rect. 1 5
578 144.78 temperature 10.0 270 > th dose dependent rect. 2 4
586 144.82 precipitation 0.1 270 < th dose independent rect. 4 23
587 144.82 humidity 50.0 270 > th dose dependent rect. 3 1
590 144.82 precipitation 0.1 270 < th dose dependent rect. 4 23
596 144.88 temperature 15.0 10 > th dose independent rect. 16 16
621 145.04 temperature 10.0 10 > th dose dependent rect. 3 5
626 145.07 atmosphere 1010.0 10 < th dose independent rect. 12 11
627 145.08 atmosphere 1010.0 720 < th dose independent rect. 10 5
628 145.08 radiation 10.0 30 < th dose independent rect. 3 20
656 145.22 wind 9.0 1440 < th dose independent rect. 4 5
660 145.22 humidity 50.0 1440 > th dose independent rect. 4 5
662 145.22 atmosphere 995.0 1440 > th dose independent rect. 4 5
676 145.25 temperature 15.0 720 > th dose independent rect. 1 14
680 145.27 temperature 10.0 270 > th dose dependent rect. 3 1
682 145.28 temperature 10.0 270 > th dose independent rect. 6 11
683 145.28 atmosphere 1015.0 270 < th dose independent rect. 6 11
703 145.32 humidity 70.0 10 > th dose independent rect. 14 18
706 145.33 humidity 50.0 10 > th dose independent rect. 23 13
735 145.38 wind 9.0 270 < th dose dependent rect. 2 4
743 145.43 temperature 10.0 10 > th dose independent rect. 12 11
746 145.43 temperature 10.0 10 > th dose independent rect. 23 13
747 145.43 atmosphere 995.0 10 > th dose independent rect. 23 13
749 145.43 wind 9.0 30 < th dose dependent rect. 3 5
753 145.47 temperature 30.0 30 < th dose independent rect. 12 11
763 145.52 precipitation 0.1 10 < th dose independent rect. 12 11
765 145.52 precipitation 0.1 10 < th dose dependent rect. 12 11
766 145.53 humidity 70.0 10 > th dose independent rect. 16 16
784 145.70 temperature 20.0 720 > th dose independent rect. 11 2
790 145.75 precipitation 0.1 10 < th dose independent rect. 23 13
791 145.75 precipitation 0.1 10 < th dose dependent rect. 23 13
818 145.91 atmosphere 995.0 10 > th dose independent rect. 12 11
839 146.01 wind 9.0 270 < th dose independent rect. 17 13
848 146.08 wind 9.0 270 < th dose independent rect. 6 11
876 146.17 atmosphere 1010.0 720 < th dose independent sin 16 NA
920 146.33 wind 7.0 720 < th dose independent rect. 23 10
927 146.36 temperature 30.0 270 < th dose independent rect. 11 9
928 146.36 wind 1.0 10 > th dose independent rect. 12 11
931 146.38 temperature 30.0 10 < th dose independent rect. 23 13
940 146.44 atmosphere 995.0 10 > th dose independent rect. 8 19
942 146.45 radiation 40.0 270 < th dose independent rect. 20 14
950 146.53 wind 9.0 10 < th dose independent rect. 12 11
956 146.55 temperature 15.0 1440 > th dose independent rect. 22 5
963 146.59 wind 1.0 720 > th dose independent rect. 23 2
968 146.63 humidity 50.0 10 > th dose independent rect. 12 11
984 146.70 humidity 80.0 90 > th dose independent rect. 3 8
991 146.76 temperature 10.0 1440 > th dose independent rect. 13 11
997 146.76 atmosphere 995.0 1440 > th dose independent rect. 24 13