Os08g0253800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 2 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0253800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glycosyl transferase, family 2 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.19 | 0.456 | 3.34 | -0.556 | 0.658 | 0.00679 | -1.35 | 3.07 | -0.159 | 11 | 10 | 4389 | -- | -- |
| 96.63 | 0.458 | 3.41 | -0.287 | 0.689 | -0.595 | -1.44 | -- | -0.146 | 11.1 | 19.3 | 47520 | -- | -- |
| 100.22 | 0.466 | 3.34 | -0.556 | 0.658 | 0.00679 | -- | 3.2 | -0.159 | 11 | 10 | 4612 | -- | -- |
| 105.09 | 0.477 | 3.4 | -0.29 | 0.674 | -0.683 | -- | -- | -0.136 | 11 | 19.64 | 47520 | -- | -- |
| 103.15 | 0.476 | 3.42 | -0.524 | -- | -0.542 | -- | 1.25 | -0.155 | -- | 9.992 | 4647 | -- | -- |
| 105.34 | 0.481 | 3.42 | -0.609 | 0.671 | -- | -1.42 | -- | -0.214 | 11 | -- | -- | -- | -- |
| 113.83 | 0.5 | 3.42 | -0.666 | 0.678 | -- | -- | -- | -0.219 | 11.1 | -- | -- | -- | -- |
| 113.06 | 0.497 | 3.43 | -0.628 | -- | -0.536 | -- | -- | -0.18 | -- | 9.992 | 4647 | -- | -- |
| 106.5 | 0.481 | 3.39 | -- | 0.689 | -0.804 | -- | -- | -0.102 | 11.1 | 19.96 | 47520 | -- | -- |
| 142.45 | 0.558 | 3.44 | -0.682 | -- | -- | -- | -- | -0.224 | -- | -- | -- | -- | -- |
| 125.53 | 0.524 | 3.41 | -- | 0.684 | -- | -- | -- | -0.144 | 11.1 | -- | -- | -- | -- |
| 123.44 | 0.519 | 3.41 | -- | -- | -0.552 | -- | -- | -0.109 | -- | 9.96 | 4585 | -- | -- |
| 154.72 | 0.581 | 3.42 | -- | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 3 | 82.88 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 5 |
| 40 | 86.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 47 | 86.19 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 51 | 86.30 | wind | 5 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 55 | 86.42 | wind | 7 | 90 | > th | dose independent | rect. | 10 | 1 |
| 57 | 86.48 | wind | 9 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 69 | 86.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 90 | 86.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 101 | 86.99 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 109 | 87.08 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 179 | 87.70 | wind | 7 | 10 | > th | dose independent | rect. | 10 | 2 |
| 203 | 87.82 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 213 | 87.92 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 3 |
| 248 | 88.20 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 2 |
| 273 | 88.37 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 341 | 88.69 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 373 | 88.88 | temperature | 25 | 270 | > th | dose independent | rect. | 3 | 14 |
| 400 | 88.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 524 | 89.58 | wind | 3 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 541 | 89.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 545 | 89.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 661 | 90.06 | wind | 5 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 701 | 90.21 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 711 | 90.25 | wind | 7 | 90 | > th | dose independent | sin | 5 | NA |
| 720 | 90.28 | wind | 5 | 720 | > th | dose independent | rect. | 3 | 4 |
| 735 | 90.31 | atmosphere | 1010 | 720 | > th | dose independent | rect. | 24 | 3 |
| 762 | 90.40 | atmosphere | 1010 | 720 | > th | dose independent | rect. | 1 | 1 |
| 801 | 90.51 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 837 | 90.59 | wind | 7 | 90 | > th | dose dependent | sin | 6 | NA |
| 894 | 90.74 | humidity | 90 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 997 | 91.02 | radiation | 1 | 720 | < th | dose dependent | rect. | 23 | 10 |