Os05g0510800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0510800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.12 | 0.513 | 7.98 | 2.53 | 0.958 | 94.3 | 0.284 | 197 | -0.328 | 3.72 | 14.98 | 4286 | -- | -- |
| 123.94 | 0.522 | 6.67 | -0.375 | 0.966 | 0.629 | 0.202 | -- | -0.359 | 3.68 | 14.98 | 4286 | -- | -- |
| 119.36 | 0.509 | 7.98 | 2.53 | 0.96 | 94.3 | -- | 197 | -0.329 | 3.74 | 14.98 | 4282 | -- | -- |
| 123.85 | 0.518 | 6.66 | -0.288 | 0.976 | 0.31 | -- | -- | -0.319 | 3.64 | 19.54 | 3211 | -- | -- |
| 168.68 | 0.605 | 7.98 | 2.55 | -- | 94.8 | -- | 198 | -0.305 | -- | 15 | 5077 | -- | -- |
| 124.69 | 0.523 | 6.67 | -0.4 | 0.973 | -- | 0.141 | -- | -0.366 | 3.65 | -- | -- | -- | -- |
| 124.75 | 0.523 | 6.67 | -0.402 | 0.973 | -- | -- | -- | -0.367 | 3.65 | -- | -- | -- | -- |
| 175.77 | 0.62 | 6.67 | -0.328 | -- | 0.901 | -- | -- | -0.332 | -- | 15 | 5077 | -- | -- |
| 123.81 | 0.518 | 6.64 | -- | 0.989 | 0.431 | -- | -- | -0.261 | 3.57 | 19.65 | 16729 | -- | -- |
| 177.36 | 0.622 | 6.67 | -0.362 | -- | -- | -- | -- | -0.341 | -- | -- | -- | -- | -- |
| 129.02 | 0.531 | 6.66 | -- | 0.966 | -- | -- | -- | -0.322 | 3.66 | -- | -- | -- | -- |
| 176.24 | 0.618 | 6.65 | -- | -- | 0.419 | -- | -- | -0.247 | -- | 18.36 | 14855 | -- | -- |
| 180.81 | 0.628 | 6.66 | -- | -- | -- | -- | -- | -0.301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.98 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 10 |
| 5 | 117.01 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 7 | 117.05 | temperature | 25.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 8 | 117.07 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 9 | 117.09 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 8 |
| 28 | 117.39 | radiation | 30.0 | 30 | < th | dose independent | rect. | 9 | 18 |
| 40 | 117.51 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 4 | 10 |
| 49 | 117.55 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 4 | 6 |
| 52 | 117.57 | radiation | 30.0 | 30 | < th | dose independent | rect. | 11 | 16 |
| 53 | 117.59 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 54 | 117.59 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 70 | 117.68 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 85 | 117.84 | wind | 3.0 | 10 | < th | dose dependent | rect. | 23 | 4 |
| 95 | 117.90 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 103 | 117.93 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 9 | 18 |
| 125 | 118.01 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 18 | 9 |
| 127 | 118.02 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 131 | 118.05 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 12 |
| 139 | 118.07 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 142 | 118.08 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 1 | 14 |
| 144 | 118.09 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 168 | 118.20 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 6 |
| 169 | 118.23 | radiation | 1.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 170 | 118.24 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 15 |
| 173 | 118.25 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 14 |
| 187 | 118.29 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 198 | 118.32 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 24 | 10 |
| 201 | 118.32 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 24 | 14 |
| 204 | 118.33 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 23 |
| 207 | 118.33 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 209 | 118.34 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 5 |
| 217 | 118.36 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 24 | 7 |
| 242 | 118.42 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 261 | 118.46 | wind | 7.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 263 | 118.48 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 264 | 118.48 | temperature | 15.0 | 10 | > th | dose independent | rect. | 6 | 23 |
| 271 | 118.50 | temperature | 15.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 282 | 118.53 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 283 | 118.53 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 290 | 118.54 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 299 | 118.57 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 308 | 118.60 | temperature | 20.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 309 | 118.60 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 11 | 16 |
| 311 | 118.61 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 318 | 118.62 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 20 |
| 320 | 118.62 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 338 | 118.65 | radiation | 10.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 355 | 118.68 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 23 |
| 360 | 118.68 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 363 | 118.68 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 370 | 118.70 | radiation | 1.0 | 270 | < th | dose independent | sin | 1 | NA |
| 372 | 118.70 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 394 | 118.73 | humidity | 90.0 | 720 | < th | dose independent | rect. | 3 | 9 |
| 412 | 118.76 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 415 | 118.76 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 427 | 118.78 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 23 |
| 430 | 118.78 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 441 | 118.79 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 450 | 118.79 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 452 | 118.80 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 4 | 12 |
| 455 | 118.81 | radiation | 1.0 | 720 | > th | dose independent | sin | 5 | NA |
| 474 | 118.83 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 475 | 118.83 | radiation | 10.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 480 | 118.83 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 484 | 118.84 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 496 | 118.85 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 524 | 118.88 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 533 | 118.89 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 551 | 118.91 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 568 | 118.92 | wind | 7.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 576 | 118.93 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 584 | 118.94 | temperature | 15.0 | 30 | > th | dose independent | rect. | 9 | 18 |
| 610 | 118.98 | temperature | 15.0 | 90 | > th | dose independent | rect. | 23 | 4 |
| 613 | 118.98 | humidity | 90.0 | 720 | < th | dose independent | rect. | 5 | 7 |
| 635 | 119.00 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 640 | 119.00 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 650 | 119.01 | wind | 7.0 | 30 | < th | dose independent | rect. | 7 | 21 |
| 664 | 119.02 | wind | 7.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 666 | 119.02 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 669 | 119.02 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 673 | 119.02 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 675 | 119.02 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 690 | 119.03 | wind | 3.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 691 | 119.03 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 1 |
| 692 | 119.03 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 3 |
| 693 | 119.03 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 8 |
| 695 | 119.03 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 706 | 119.04 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 18 |
| 716 | 119.04 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 719 | 119.05 | humidity | 80.0 | 270 | > th | dose independent | rect. | 8 | 9 |
| 733 | 119.06 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 746 | 119.07 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 755 | 119.08 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 11 |
| 757 | 119.08 | radiation | 30.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 758 | 119.08 | humidity | 90.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 766 | 119.09 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 22 | 15 |
| 777 | 119.10 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 787 | 119.11 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 788 | 119.11 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 807 | 119.12 | wind | 5.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 812 | 119.12 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 12 | 19 |
| 821 | 119.13 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 19 |
| 827 | 119.13 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 15 | 16 |
| 867 | 119.15 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 880 | 119.15 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 15 | 22 |
| 883 | 119.16 | radiation | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 889 | 119.16 | temperature | 15.0 | 4320 | < th | dose dependent | no | NA | NA |
| 920 | 119.17 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 4 | 6 |
| 922 | 119.17 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 10 |
| 938 | 119.18 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 974 | 119.21 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 23 | 4 |
| 977 | 119.21 | radiation | 20.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 994 | 119.23 | wind | 7.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 996 | 119.23 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 999 | 119.23 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 1 |