Os06g0625700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0625700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 331.04 | 0.855 | 4.19 | 2.57 | 2.14 | -1.76 | 1.27 | 1.46 | 0.888 | 0.571 | 22.9 | 1118 | -- | -- |
| 334.08 | 0.851 | 4.21 | 2.46 | 2.15 | -1.68 | 1.49 | -- | 0.817 | 0.577 | 22.52 | 1116 | -- | -- |
| 337.22 | 0.855 | 4.17 | 2.7 | 2.17 | -1.87 | -- | 2.29 | 0.931 | 0.369 | 22.68 | 1042 | -- | -- |
| 339.83 | 0.859 | 4.22 | 2.25 | 2.12 | -1.81 | -- | -- | 0.844 | 0.456 | 19.16 | 1066 | -- | -- |
| 441.36 | 0.984 | 4.2 | 2.04 | -- | -2.6 | -- | -0.793 | 0.842 | -- | 22.63 | 1651 | -- | -- |
| 413.03 | 0.953 | 4.3 | 1.67 | 1.78 | -- | 1.14 | -- | 0.471 | 0.629 | -- | -- | -- | -- |
| 418.57 | 0.958 | 4.3 | 1.63 | 1.78 | -- | -- | -- | 0.466 | 0.582 | -- | -- | -- | -- |
| 418.5 | 0.957 | 4.16 | 2.28 | -- | -2.99 | -- | -- | 0.977 | -- | 19.16 | 1066 | -- | -- |
| 450.34 | 0.988 | 4.31 | -- | 2.04 | -1.08 | -- | -- | 0.453 | 0.586 | 22.86 | 1096 | -- | -- |
| 617.56 | 1.16 | 4.27 | 1.69 | -- | -- | -- | -- | 0.496 | -- | -- | -- | -- | -- |
| 488.26 | 1.03 | 4.34 | -- | 1.81 | -- | -- | -- | 0.285 | 0.626 | -- | -- | -- | -- |
| 549.69 | 1.1 | 4.23 | -- | -- | -2.48 | -- | -- | 0.653 | -- | 19.16 | 1066 | -- | -- |
| 692.78 | 1.23 | 4.31 | -- | -- | -- | -- | -- | 0.309 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 331.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 14 |
| 20 | 332.05 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 45 | 332.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 47 | 332.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 120 | 333.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 170 | 334.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 21 |
| 193 | 334.53 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 196 | 334.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 22 |
| 221 | 334.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 21 |
| 230 | 334.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 319 | 334.97 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 357 | 335.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 489 | 335.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 580 | 335.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 585 | 335.70 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 632 | 335.87 | temperature | 25 | 720 | > th | dose dependent | sin | 10 | NA |
| 688 | 336.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 23 |