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Os09g0428000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycosyl transferase, family 2 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.5 (0.0293) R2 : 0.402
β1 : -1.67 (0.107) R2dD : 0.33 R2D : 0.292
β2 : 0.581 (0.0695) R2dC : 0.0918 R2C : 0.0802
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.2 (0.0626) R2dN8 : 0.018 R2N8 : -0.013
σ : 0.551
deviance : 138.52
__
_____
C
peak time of C : 0.261
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
116.84 0.508 9.5 -2.01 0.483 0.733 -1.21 -1.08 -0.103 23.5 33.07 1082 -- --
116.95 0.504 9.49 -1.84 0.501 0.62 -1.19 -- -0.122 23.5 33.19 1095 -- --
122.69 0.516 9.49 -1.93 0.499 0.698 -- -1 -0.106 0.0957 33.4 1086 -- --
122.77 0.516 9.48 -1.8 0.501 0.583 -- -- -0.109 0.0961 33.3 1087 -- --
137.94 0.547 9.47 -1.86 -- 0.72 -- -0.409 -0.0882 -- 33.3 1061 -- --
134.2 0.543 9.5 -1.71 0.573 -- -1.02 -- -0.203 23.8 -- -- -- --
138.52 0.551 9.5 -1.67 0.581 -- -- -- -0.2 0.261 -- -- -- --
137.97 0.547 9.46 -1.81 -- 0.673 -- -- -0.0858 -- 33.13 1067 -- --
205.62 0.668 9.44 -- 0.503 0.387 -- -- 0.0544 0.0241 33.9 1041 -- --
159.75 0.591 9.49 -1.65 -- -- -- -- -0.191 -- -- -- -- --
212.19 0.681 9.46 -- 0.558 -- -- -- -0.014 0.101 -- -- -- --
221.21 0.693 9.43 -- -- 0.481 -- -- 0.0747 -- 33.7 1039 -- --
231.81 0.711 9.45 -- -- -- -- -- -0.00786 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 107.79 temperature 10.0 270 > th dose dependent rect. 6 8
3 109.01 wind 9.0 90 < th dose independent rect. 9 18
5 109.15 temperature 30.0 720 > th dose dependent rect. 18 1
19 109.16 wind 1.0 270 < th dose independent rect. 4 1
21 109.22 wind 9.0 270 < th dose independent rect. 9 16
22 109.25 temperature 15.0 10 > th dose dependent rect. 9 7
23 109.28 wind 9.0 90 < th dose dependent rect. 9 18
25 109.40 wind 9.0 270 < th dose dependent rect. 7 19
27 109.42 temperature 10.0 90 > th dose dependent rect. 3 6
28 109.46 precipitation 0.1 90 < th dose independent rect. 3 6
29 109.46 precipitation 0.1 90 < th dose dependent rect. 3 6
30 109.48 humidity 50.0 270 > th dose dependent rect. 1 8
31 109.55 radiation 30.0 270 < th dose independent rect. 1 8
32 109.56 wind 1.0 270 < th dose dependent rect. 4 1
33 109.57 precipitation 0.1 270 < th dose independent rect. 1 8
34 109.57 precipitation 0.1 270 < th dose dependent rect. 1 8
37 109.70 wind 9.0 30 < th dose dependent rect. 4 5
39 109.74 temperature 30.0 270 < th dose independent rect. 1 8
40 109.75 wind 9.0 90 < th dose independent rect. 3 6
41 109.75 temperature 10.0 90 > th dose independent rect. 3 6
44 109.75 humidity 50.0 90 > th dose independent rect. 3 6
46 109.75 atmosphere 995.0 90 > th dose independent rect. 3 6
47 109.75 atmosphere 1015.0 90 < th dose independent rect. 3 6
48 109.75 temperature 10.0 90 > th dose independent rect. 9 18
54 109.81 temperature 30.0 90 < th dose independent rect. 3 6
55 109.81 radiation 40.0 90 < th dose independent rect. 3 6
59 109.87 precipitation 0.1 90 < th dose independent rect. 9 18
60 109.87 precipitation 0.1 90 < th dose dependent rect. 9 18
62 109.88 wind 9.0 270 < th dose independent rect. 1 8
63 109.88 temperature 10.0 270 > th dose independent rect. 1 8
65 109.88 humidity 50.0 270 > th dose independent rect. 1 8
66 109.88 atmosphere 995.0 270 > th dose independent rect. 1 8
67 109.88 atmosphere 1015.0 270 < th dose independent rect. 1 8
68 109.88 temperature 10.0 270 > th dose independent rect. 9 16
69 109.90 wind 9.0 270 < th dose dependent rect. 7 7
73 110.02 temperature 15.0 270 > th dose independent rect. 19 7
74 110.03 humidity 50.0 90 > th dose dependent rect. 3 6
79 110.10 wind 5.0 270 < th dose independent rect. 7 19
83 110.16 precipitation 0.1 270 < th dose independent rect. 2 17
84 110.16 precipitation 0.1 270 < th dose dependent rect. 2 17
90 110.20 wind 5.0 270 < th dose independent rect. 7 7
101 110.33 wind 9.0 270 < th dose independent rect. 7 19
111 110.44 radiation 40.0 270 < th dose dependent rect. 2 7
135 110.58 temperature 15.0 270 > th dose independent rect. 2 17
144 110.65 radiation 1.0 270 < th dose dependent rect. 19 7
146 110.66 temperature 30.0 270 < th dose independent rect. 19 7
147 110.66 humidity 50.0 270 > th dose independent rect. 19 7
149 110.66 atmosphere 995.0 270 > th dose independent rect. 19 7
150 110.66 radiation 1.0 270 < th dose independent rect. 19 7
156 110.66 atmosphere 1015.0 270 < th dose independent rect. 2 17
164 110.70 wind 9.0 270 < th dose independent rect. 19 7
168 110.72 precipitation 0.1 270 < th dose independent rect. 9 16
169 110.72 precipitation 0.1 270 < th dose dependent rect. 9 16
227 110.88 temperature 10.0 270 > th dose independent rect. 7 19
234 110.93 temperature 10.0 270 > th dose dependent rect. 3 3
241 110.99 temperature 25.0 270 < th dose independent rect. 4 1
249 111.07 temperature 30.0 720 > th dose independent rect. 18 1
265 111.09 precipitation 0.1 270 < th dose independent rect. 19 7
267 111.09 precipitation 0.1 270 < th dose dependent rect. 19 7
304 111.30 humidity 60.0 270 > th dose dependent rect. 3 3
310 111.36 humidity 90.0 270 > th dose independent rect. 3 2
315 111.37 precipitation 0.1 270 < th dose independent rect. 7 19
318 111.37 precipitation 0.1 270 < th dose dependent rect. 7 19
344 111.52 wind 9.0 270 < th dose independent rect. 6 21
358 111.60 atmosphere 995.0 90 > th dose independent rect. 9 18
362 111.62 humidity 50.0 270 > th dose independent rect. 7 19
395 111.67 temperature 10.0 270 > th dose dependent rect. 1 7
399 111.72 humidity 50.0 270 > th dose independent rect. 8 17
403 111.75 precipitation 0.1 270 < th dose independent rect. 6 8
405 111.75 precipitation 0.1 270 < th dose dependent rect. 6 8
410 111.78 precipitation 0.1 270 < th dose independent rect. 3 3
411 111.78 precipitation 0.1 270 < th dose dependent rect. 3 3
424 111.84 atmosphere 995.0 90 > th dose dependent rect. 3 6
426 111.85 temperature 10.0 270 > th dose independent rect. 6 8
427 111.85 temperature 20.0 270 > th dose independent rect. 6 8
428 111.85 atmosphere 995.0 270 > th dose independent rect. 6 8
429 111.85 atmosphere 1015.0 270 < th dose independent rect. 6 8
430 111.85 temperature 10.0 270 > th dose independent rect. 14 16
443 111.91 wind 9.0 270 < th dose independent rect. 2 17
453 111.94 atmosphere 995.0 270 > th dose independent rect. 9 16
465 112.00 atmosphere 995.0 270 > th dose independent rect. 7 19
470 112.01 humidity 70.0 720 < th dose dependent rect. 18 1
471 112.01 wind 1.0 90 < th dose dependent rect. 4 3
482 112.08 temperature 15.0 30 > th dose independent rect. 20 8
483 112.08 precipitation 0.1 270 < th dose independent rect. 14 16
497 112.08 precipitation 0.1 270 < th dose dependent rect. 14 16
518 112.16 radiation 40.0 270 < th dose independent rect. 14 16
529 112.20 wind 9.0 270 < th dose independent rect. 3 3
530 112.20 wind 1.0 90 < th dose independent rect. 4 3
531 112.20 temperature 10.0 270 > th dose independent rect. 3 3
534 112.20 humidity 50.0 270 > th dose independent rect. 3 3
537 112.20 atmosphere 995.0 270 > th dose independent rect. 3 3
538 112.20 atmosphere 1015.0 270 < th dose independent rect. 3 3
539 112.20 radiation 20.0 270 < th dose independent rect. 3 3
542 112.20 temperature 10.0 270 > th dose independent rect. 6 21
547 112.22 humidity 70.0 720 < th dose independent rect. 18 2
591 112.31 wind 7.0 270 < th dose independent rect. 5 23
592 112.32 wind 9.0 270 < th dose dependent rect. 3 3
593 112.33 humidity 50.0 1440 < th dose independent rect. 16 1
596 112.33 radiation 40.0 270 < th dose dependent rect. 3 3
607 112.35 wind 9.0 30 < th dose dependent rect. 20 8
625 112.42 humidity 50.0 1440 < th dose dependent rect. 16 1
628 112.44 temperature 10.0 270 > th dose dependent rect. 4 1
629 112.45 humidity 90.0 270 > th dose independent rect. 2 4
654 112.51 wind 9.0 270 < th dose independent rect. 14 16
661 112.53 temperature 30.0 30 < th dose independent rect. 20 8
662 112.53 humidity 50.0 30 > th dose independent rect. 20 8
665 112.53 atmosphere 995.0 30 > th dose independent rect. 20 8
666 112.53 radiation 1.0 30 < th dose independent rect. 20 8
673 112.53 atmosphere 1015.0 30 < th dose independent rect. 4 16
674 112.53 precipitation 0.1 30 < th dose independent rect. 4 16
676 112.53 radiation 1.0 30 < th dose dependent rect. 20 8
681 112.53 precipitation 0.1 30 < th dose dependent rect. 4 16
687 112.55 radiation 1.0 270 < th dose dependent rect. 9 17
712 112.59 wind 9.0 10 < th dose independent rect. 20 8
713 112.59 precipitation 0.1 30 < th dose independent rect. 20 8
715 112.59 precipitation 0.1 30 < th dose dependent rect. 20 8
723 112.61 radiation 1.0 270 > th dose independent rect. 6 8
762 112.68 wind 5.0 270 < th dose dependent rect. 4 1
802 112.75 atmosphere 995.0 270 > th dose independent rect. 2 17
853 112.94 precipitation 0.1 270 < th dose independent rect. 6 21
858 112.94 precipitation 0.1 270 < th dose dependent rect. 6 21
863 112.96 radiation 1.0 10 < th dose dependent rect. 20 20
905 113.10 wind 7.0 10 < th dose independent rect. 9 7
927 113.18 humidity 50.0 270 > th dose independent rect. 7 7
946 113.23 radiation 40.0 30 < th dose dependent rect. 4 6
956 113.27 radiation 1.0 270 < th dose dependent rect. 4 1
971 113.30 wind 9.0 30 < th dose independent rect. 4 16
980 113.32 radiation 1.0 10 < th dose dependent rect. 20 18
986 113.33 radiation 1.0 10 < th dose dependent rect. 20 16
990 113.34 radiation 1.0 10 < th dose dependent rect. 20 11
993 113.35 precipitation 0.1 270 < th dose independent rect. 4 1
995 113.35 precipitation 0.1 270 < th dose dependent rect. 4 1