Os09g0439100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cellulose synthase-like A4.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0439100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cellulose synthase-like A4.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.05 | 0.404 | 8.27 | -1.03 | 0.219 | -0.71 | 0.291 | -0.0888 | 0.506 | 9.31 | 1010 | 4433 | -- | -- |
| 74.05 | 0.401 | 8.27 | -1.06 | 0.22 | -0.713 | 0.311 | -- | 0.506 | 9.27 | 1009 | 4501 | -- | -- |
| 74.25 | 0.401 | 8.27 | -1.02 | 0.217 | -0.715 | -- | -0.114 | 0.511 | 10 | 1010 | 4424 | -- | -- |
| 74.28 | 0.401 | 8.27 | -1.04 | 0.218 | -0.713 | -- | -- | 0.507 | 9.98 | 1010 | 4466 | -- | -- |
| 77.11 | 0.409 | 8.27 | -1.02 | -- | -0.714 | -- | -0.113 | 0.515 | -- | 1010 | 4416 | -- | -- |
| 87.8 | 0.439 | 8.24 | -0.866 | 0.229 | -- | 0.337 | -- | 0.639 | 8.88 | -- | -- | -- | -- |
| 88.1 | 0.44 | 8.24 | -0.853 | 0.227 | -- | -- | -- | 0.64 | 9.54 | -- | -- | -- | -- |
| 77.14 | 0.409 | 8.28 | -1.04 | -- | -0.709 | -- | -- | 0.509 | -- | 1010 | 4425 | -- | -- |
| 100.37 | 0.467 | 8.24 | -- | 0.228 | -0.58 | -- | -- | 0.669 | 10.2 | 1012 | 3656 | -- | -- |
| 91.14 | 0.446 | 8.25 | -0.854 | -- | -- | -- | -- | 0.64 | -- | -- | -- | -- | -- |
| 107.27 | 0.484 | 8.22 | -- | 0.229 | -- | -- | -- | 0.735 | 9.82 | -- | -- | -- | -- |
| 102.47 | 0.471 | 8.24 | -- | -- | -0.643 | -- | -- | 0.667 | -- | 1014 | 4240 | -- | -- |
| 110.4 | 0.49 | 8.23 | -- | -- | -- | -- | -- | 0.735 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.77 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 2 | 70.92 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 4 | 71.01 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 17 | 71.05 | humidity | 50 | 14400 | < th | dose dependent | sin | 8 | NA |
| 24 | 71.20 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 11 |
| 32 | 71.20 | humidity | 50 | 43200 | < th | dose dependent | rect. | 19 | 19 |
| 181 | 71.56 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 327 | 71.62 | humidity | 50 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 332 | 71.66 | humidity | 50 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 354 | 71.74 | humidity | 50 | 43200 | < th | dose dependent | rect. | 12 | 21 |
| 383 | 71.79 | humidity | 50 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 478 | 71.90 | humidity | 50 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 684 | 72.06 | humidity | 50 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 691 | 72.10 | humidity | 50 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 707 | 72.13 | humidity | 50 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 751 | 72.22 | humidity | 50 | 43200 | < th | dose independent | sin | 7 | NA |
| 767 | 72.26 | humidity | 50 | 43200 | > th | dose independent | sin | 7 | NA |
| 831 | 72.39 | wind | 7 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 837 | 72.40 | humidity | 60 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 923 | 72.57 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 963 | 72.76 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 968 | 72.79 | wind | 9 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 974 | 72.82 | wind | 9 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 975 | 72.83 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 976 | 72.83 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 986 | 72.90 | humidity | 60 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 990 | 72.92 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 1000 | 72.93 | atmosphere | 1010 | 4320 | > th | dose independent | rect. | 12 | 1 |