Os03g0169500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cellulose synthase-like A4.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0169500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cellulose synthase-like A4.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.2 | 0.415 | 2.4 | 0.717 | 0.0572 | -49.1 | 0.257 | 128 | -0.0243 | 15.5 | 47 | 166 | -- | -- |
| 93.77 | 0.454 | 2.71 | 0.0373 | 0.0939 | -0.0582 | 0.67 | -- | -0.0285 | 16.1 | 45.68 | 315 | -- | -- |
| 76.84 | 0.408 | 2.38 | 0.786 | 0.057 | -50 | -- | 131 | -0.00501 | 14.6 | 44.67 | 152 | -- | -- |
| 81.69 | 0.421 | 2.69 | -0.0176 | 0.0621 | 2.87 | -- | -- | -0.00752 | 16.6 | 47 | 147 | -- | -- |
| 76.8 | 0.408 | 2.39 | 0.734 | -- | -50.7 | -- | 133 | -0.0211 | -- | 45 | 145 | -- | -- |
| 93.78 | 0.454 | 2.71 | 0.0351 | 0.0927 | -- | 0.668 | -- | -0.0282 | 16.1 | -- | -- | -- | -- |
| 94.97 | 0.456 | 2.71 | 0.0429 | 0.1 | -- | -- | -- | -0.0246 | 14.8 | -- | -- | -- | -- |
| 81.53 | 0.421 | 2.7 | -0.0744 | -- | 3.07 | -- | -- | -0.0149 | -- | 47 | 158 | -- | -- |
| 81.58 | 0.421 | 2.7 | -- | 0.0405 | 2.94 | -- | -- | -0.00788 | 14.4 | 47 | 158 | -- | -- |
| 95.55 | 0.457 | 2.71 | 0.0386 | -- | -- | -- | -- | -0.0271 | -- | -- | -- | -- | -- |
| 95.02 | 0.456 | 2.71 | -- | 0.0992 | -- | -- | -- | -0.0294 | 14.8 | -- | -- | -- | -- |
| 81.68 | 0.421 | 2.7 | -- | -- | 2.97 | -- | -- | -0.00835 | -- | 47 | 158 | -- | -- |
| 95.59 | 0.456 | 2.71 | -- | -- | -- | -- | -- | -0.0314 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.23 | humidity | 50.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 4 | 76.37 | humidity | 50.0 | 90 | < th | dose independent | sin | 12 | NA |
| 7 | 76.62 | humidity | 50.0 | 30 | < th | dose independent | rect. | 14 | 2 |
| 9 | 76.70 | humidity | 50.0 | 30 | < th | dose dependent | rect. | 14 | 2 |
| 10 | 76.76 | humidity | 50.0 | 90 | > th | dose independent | sin | 12 | NA |
| 114 | 77.15 | wind | 1.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 116 | 77.15 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 269 | 78.17 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 1 |
| 272 | 78.17 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 296 | 78.56 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 300 | 78.73 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 400 | 81.18 | humidity | 50.0 | 270 | < th | dose independent | rect. | 11 | 4 |
| 424 | 81.29 | humidity | 50.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 425 | 81.29 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 426 | 81.30 | humidity | 50.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 489 | 81.62 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 2 |
| 634 | 82.33 | temperature | 30.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 736 | 82.96 | humidity | 50.0 | 270 | < th | dose independent | sin | 19 | NA |
| 850 | 83.41 | humidity | 50.0 | 270 | < th | dose independent | no | NA | NA |