BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0562300 Os05g0562300|AK067414
(362 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0562300 Similar to DnaJ-like protein 500 e-142
Os02g0306900 Similar to DnaJ-like protein 290 1e-78
Os02g0128400 Heat shock protein DnaJ, N-terminal domain con... 284 7e-77
Os05g0127400 Similar to DnaJ homolog subfamily B member 1 (... 264 8e-71
Os01g0239100 Heat shock protein DnaJ family protein 252 3e-67
Os08g0374400 Similar to DnaJ-like protein 212 3e-55
Os01g0875700 Heat shock protein DnaJ family protein 177 1e-44
Os07g0513600 HSP40/DnaJ peptide-binding domain containing p... 135 3e-32
Os03g0787300 Similar to DnaJ homolog 101 8e-22
Os08g0161900 Similar to DnaJ-like protein 101 1e-21
Os03g0648400 Similar to DnaJ protein homolog (DNAJ-1) 97 2e-20
Os04g0549600 Heat shock protein DnaJ family protein 96 3e-20
Os02g0656500 DnaJ-like protein 96 3e-20
Os12g0619100 96 3e-20
Os05g0156500 Similar to Apobec-1 binding protein 2 92 6e-19
AK108884 81 1e-15
>Os05g0562300 Similar to DnaJ-like protein
Length = 362
Score = 500 bits (1287), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/362 (73%), Positives = 265/362 (73%)
Query: 1 MGMDYYKILGVXXXXXXXXXXXXYRKLAMKWHPDXXXXXXXXXXXXXXQISEAYEVLSDP 60
MGMDYYKILGV YRKLAMKWHPD QISEAYEVLSDP
Sbjct: 1 MGMDYYKILGVDKAASDDDLKKAYRKLAMKWHPDKNPNNKKEAENKFKQISEAYEVLSDP 60
Query: 61 QKRAVYDQYGEEGLKGQVXXXXXXXXXXXXXTFFSTGGDGPNVFRFNPRNAEDIFAEXXX 120
QKRAVYDQYGEEGLKGQV TFFSTGGDGPNVFRFNPRNAEDIFAE
Sbjct: 61 QKRAVYDQYGEEGLKGQVPPPGAGGAGPGGATFFSTGGDGPNVFRFNPRNAEDIFAEFFG 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSIXXXXXXXXXXXXXXXXXXXXXXXXXXR 180
SSSI R
Sbjct: 121 SSSPFGGMGGGMGGGMGGGPGMRTGGTRFSSSIFGDDIFGSAFGGGADGHHGMHGGGAGR 180
Query: 181 ALKAPAIERKLPCSLEELYKGTTKKMKISREIADASGKTIPVEEILTIDVKPGWKKGTKI 240
ALKAPAIERKLPCSLEELYKGTTKKMKISREIADASGKTIPVEEILTIDVKPGWKKGTKI
Sbjct: 181 ALKAPAIERKLPCSLEELYKGTTKKMKISREIADASGKTIPVEEILTIDVKPGWKKGTKI 240
Query: 241 TFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLVVTQKIPLAEALTGHTVHLTTLDG 300
TFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLVVTQKIPLAEALTGHTVHLTTLDG
Sbjct: 241 TFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLVVTQKIPLAEALTGHTVHLTTLDG 300
Query: 301 RSLTIPITSVINPGYEEVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLTADQKSGVKRLL 360
RSLTIPITSVINPGYEEVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLTADQKSGVKRLL
Sbjct: 301 RSLTIPITSVINPGYEEVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLTADQKSGVKRLL 360
Query: 361 GQ 362
GQ
Sbjct: 361 GQ 362
>Os02g0306900 Similar to DnaJ-like protein
Length = 349
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/182 (75%), Positives = 162/182 (89%)
Query: 180 RALKAPAIERKLPCSLEELYKGTTKKMKISREIADASGKTIPVEEILTIDVKPGWKKGTK 239
R KA IE +LPC+L +LYKGTTKKMKISREI D+SG+T+ VEEILTID+KPGWKKGTK
Sbjct: 167 RPQKAAPIENRLPCNLADLYKGTTKKMKISREILDSSGRTMVVEEILTIDIKPGWKKGTK 226
Query: 240 ITFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLVVTQKIPLAEALTGHTVHLTTLD 299
ITFPEKGNE P+VIPAD+VF+IDEKPH +FTR+GNDLV+TQKI LAEALTG TV +T LD
Sbjct: 227 ITFPEKGNESPHVIPADIVFVIDEKPHDLFTREGNDLVMTQKISLAEALTGCTVQVTALD 286
Query: 300 GRSLTIPITSVINPGYEEVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLTADQKSGVKRL 359
GR+LT+PI +V+ PGYEEVV EGMPIPKDPSKKGNLR+KF+IKFP+RLT++QKS +KRL
Sbjct: 287 GRNLTVPINNVVYPGYEEVVLREGMPIPKDPSKKGNLRIKFNIKFPSRLTSEQKSEIKRL 346
Query: 360 LG 361
L
Sbjct: 347 LA 348
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 1 MGMDYYKILGVXXXXXXXXXXXXYRKLAMKWHPDXXXXXXXXXXXXXXQISEAYEVLSDP 60
MG+DYYK+L V YRKLAMKWHPD QISEAYEVLSD
Sbjct: 1 MGVDYYKLLQVERGATEEELKKAYRKLAMKWHPDKNPNSKKEAEAKFKQISEAYEVLSDS 60
Query: 61 QKRAVYDQYGEEGLKGQVXXXXXXXXXXXXXTFFSTGGDGPNVFRFNPRNAEDIFAE 117
QKRAVYDQYGEEGLKGQV + FRFNPR+A+DIFAE
Sbjct: 61 QKRAVYDQYGEEGLKGQVPPPGAGGPGGSSYYGGDG-----STFRFNPRSADDIFAE 112
>Os02g0128400 Heat shock protein DnaJ, N-terminal domain containing protein
Length = 339
Score = 284 bits (727), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 198/361 (54%), Gaps = 23/361 (6%)
Query: 1 MGMDYYKILGVXXXXXXXXXXXXYRKLAMKWHPDXXXXXXXXXXXXXXQISEAYEVLSDP 60
MGMDYY IL V YR+LA WHPD QI+EAYEVLSDP
Sbjct: 1 MGMDYYNILKVNRNATLEDLKKSYRRLARTWHPDKNPTGGAEAEAKFKQITEAYEVLSDP 60
Query: 61 QKRAVYDQYGEEGLKGQVXXXXXXXXXXXXXTFFSTGGDGPNVFRFNPRNAEDIFAEXXX 120
+KRA+YD+YGEEGLKG T + G GP+ FR+NP + +D FAE
Sbjct: 61 EKRAIYDRYGEEGLKGM------PPPGSQSRTSAAAGSSGPSNFRYNPSDPDDFFAEFMA 114
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSIXXXXXXXXXXXXXXXXXXXXXXXXXXR 180
SS+ +
Sbjct: 115 SNKPYSFDQERTRFQPRSQWTAGNTRGEASSA-----------------SHKESSTSTSQ 157
Query: 181 ALKAPAIERKLPCSLEELYKGTTKKMKISREIADASGKTIPVEEILTIDVKPGWKKGTKI 240
K PAIE+ L C+LEELY GT +KMKI+R +A+ GK E+L ++V PGWKKGTKI
Sbjct: 158 LEKPPAIEKTLLCTLEELYNGTKRKMKITRNVANTDGKVEIETEVLPVEVLPGWKKGTKI 217
Query: 241 TFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLVVTQKIPLAEALTGHTVHLTTLDG 300
TFP KG+ +P DL F+ID KPH V+ +GN+LV TQ IPL +AL G T+HL TLDG
Sbjct: 218 TFPNKGDRLSGQLPQDLTFVIDLKPHDVYLLEGNNLVATQVIPLVDALAGTTIHLKTLDG 277
Query: 301 RSLTIPITSVINPGYEEVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLTADQKSGVKRLL 360
R+L I + V+ PG+E V+ EG PI K+P KKGNL++KFD+ FP RL++ Q++ +++++
Sbjct: 278 RNLPIRVEEVVRPGHEIVLANEGWPIRKEPGKKGNLKIKFDVTFPTRLSSSQRAAIRQIM 337
Query: 361 G 361
G
Sbjct: 338 G 338
>Os05g0127400 Similar to DnaJ homolog subfamily B member 1 (Heat shock 40 kDa
protein 1) (Heat shock protein 40) (HSP40) (DnaJ protein
homolog 1) (HDJ-1)
Length = 331
Score = 264 bits (674), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 124/180 (68%), Positives = 155/180 (86%)
Query: 181 ALKAPAIERKLPCSLEELYKGTTKKMKISREIADASGKTIPVEEILTIDVKPGWKKGTKI 240
A KAPAIER+L CSLE+LY+G TKKMKISR++ DA+GK +EEILTID+KPGWKKGTK+
Sbjct: 149 ATKAPAIERQLACSLEDLYRGATKKMKISRDVLDATGKPTNLEEILTIDIKPGWKKGTKV 208
Query: 241 TFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLVVTQKIPLAEALTGHTVHLTTLDG 300
TFP+KGNE+PN+IP+DLVFII+E+ H F RD +DL+ T +I L EALTG TV LTTLDG
Sbjct: 209 TFPKKGNEKPNIIPSDLVFIIEERSHARFKRDKDDLIYTHRISLVEALTGCTVQLTTLDG 268
Query: 301 RSLTIPITSVINPGYEEVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLTADQKSGVKRLL 360
R+LT+P+ SVINP EEVV+GEGMPI K+PSKKG+L+++F IKFP LT+DQKSG+++LL
Sbjct: 269 RNLTVPVKSVINPTSEEVVKGEGMPITKEPSKKGDLKIRFQIKFPTNLTSDQKSGIQQLL 328
>Os01g0239100 Heat shock protein DnaJ family protein
Length = 349
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 149/179 (83%)
Query: 183 KAPAIERKLPCSLEELYKGTTKKMKISREIADASGKTIPVEEILTIDVKPGWKKGTKITF 242
K P IE +LP SL +LYKG TKKMKISREI D +G+ EEIL I+VKPGWK+GTKITF
Sbjct: 170 KPPPIENRLPVSLADLYKGVTKKMKISREIIDFNGRVSQQEEILQIEVKPGWKRGTKITF 229
Query: 243 PEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLVVTQKIPLAEALTGHTVHLTTLDGRS 302
EKGN+ PN+ PAD+VFII+EKPH +FTR+GNDLV+T+KI L EALTG+T + TLD RS
Sbjct: 230 EEKGNQAPNMKPADIVFIIEEKPHDIFTREGNDLVITEKISLVEALTGYTARIITLDARS 289
Query: 303 LTIPITSVINPGYEEVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLTADQKSGVKRLLG 361
L++PI SVI+P Y EVV GEGMP PK P+KKG+L++KF+I+FP+RLT+DQK+G KRLLG
Sbjct: 290 LSVPINSVIHPDYVEVVPGEGMPNPKGPNKKGDLKIKFNIRFPSRLTSDQKAGFKRLLG 348
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 1 MGMDYYKILGVXXXXXXXXXXXXYRKLAMKWHPDXX-XXXXXXXXXXXXQISEAYEVLSD 59
MG+DYYK+LGV Y KLAM+WHPD QISEAYEVLSD
Sbjct: 1 MGVDYYKVLGVDRGAGDDDLKKAYHKLAMRWHPDKNPTNNKKEAEAKFKQISEAYEVLSD 60
Query: 60 PQKRAVYDQYGEEGLKGQVXXXXXXXXXXXXXTFFSTGGDGPNVFRFNPRNAEDIFAE 117
PQKR +YDQ GEEGLKGQ F GG N F FNPR+A+DIFAE
Sbjct: 61 PQKRTIYDQVGEEGLKGQPPPGAGGPGASP----FYPGGAHSNSFHFNPRSADDIFAE 114
>Os08g0374400 Similar to DnaJ-like protein
Length = 344
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 133/191 (69%), Gaps = 15/191 (7%)
Query: 185 PAIERKLPCSLEELYKGTTKKMKISREIADASGKTIPVEEILTIDVKPGWKKGTKITFPE 244
P +E KL C+LEELY G TK MKISR + DASG+ EIL+I+VKPGWKKGTKITFP
Sbjct: 150 PPVESKLACTLEELYVGVTKNMKISRNVVDASGRMKTESEILSIEVKPGWKKGTKITFPG 209
Query: 245 KGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLVVTQKIPLAEALTGHTVHLTTLDGRSLT 304
KGN+Q + +PADLVF++DEKPH V+ RDGNDLV ++ LA+AL G V L TLDGR L
Sbjct: 210 KGNQQWSQLPADLVFVVDEKPHDVYRRDGNDLVAEARVTLADALGGTVVVLATLDGRELL 269
Query: 305 IPITS---------------VINPGYEEVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLT 349
+ ++ V+ PGYE VV EGMPI ++P + G+LR++FD+ FP RLT
Sbjct: 270 VEVSGGGVAAGDEDDDDEDPVVYPGYELVVPSEGMPIAREPGRHGSLRIRFDVAFPERLT 329
Query: 350 ADQKSGVKRLL 360
Q++ +KR+L
Sbjct: 330 RRQRAQIKRIL 340
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 42/73 (57%)
Query: 3 MDYYKILGVXXXXXXXXXXXXYRKLAMKWHPDXXXXXXXXXXXXXXQISEAYEVLSDPQK 62
MDYY+IL V YR+LAM+WHPD I+EAY VLSD K
Sbjct: 1 MDYYEILHVDRSATDDDIRRAYRRLAMRWHPDKNHTGKKDAEAKFKDITEAYNVLSDAGK 60
Query: 63 RAVYDQYGEEGLK 75
RA+YDQYGEEGL+
Sbjct: 61 RALYDQYGEEGLR 73
>Os01g0875700 Heat shock protein DnaJ family protein
Length = 327
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 119/179 (66%), Gaps = 1/179 (0%)
Query: 183 KAPAIERKLPCSLEELYKGTTKKMKISREIADASGKTIPVEEILTIDVKPGWKKGTKITF 242
KAP +ERKL C+LEEL G K++K +R++ +G + E + VKPGWKKG KITF
Sbjct: 143 KAPPLERKLDCTLEELCHGCKKEVKFTRDVVTKNGSIVKKEVSQMVLVKPGWKKGNKITF 202
Query: 243 PEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLVVTQKIPLAEALTGHTVHLTTLDGRS 302
G+E+P +PAD VF+I EK HPVF R GNDLV+ ++PL ALTG + L G+
Sbjct: 203 EGMGDERPGCLPADAVFVISEKKHPVFKRVGNDLVLKAEVPLVSALTGWSFSFRLLSGKK 262
Query: 303 LTIPIT-SVINPGYEEVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLTADQKSGVKRLL 360
++ +I PGYE++++GEGMPI +G+LRVKF+I FP +LT +Q+ G+ ++L
Sbjct: 263 VSCSFQDEIICPGYEKIIKGEGMPIADQKGARGDLRVKFEIAFPKQLTDEQRDGLAQIL 321
>Os07g0513600 HSP40/DnaJ peptide-binding domain containing protein
Length = 526
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 3/174 (1%)
Query: 190 KLPCSLEELYKGTTKKMKISREIADASGKTIPVEEI-LTIDVKPGWKKGTKITFPEKGNE 248
+L C+LEELY+GT + + R I + + + EEI L + V PG +KGTKIT P +G+
Sbjct: 355 ELMCTLEELYQGTDLTVALHRRITRHTDEPVENEEIILQVKVLPGSRKGTKITLPYEGSH 414
Query: 249 QPNVIPADLVFIIDEKPHPVFTRDGNDLVVTQKIPLAEALTGHTVHLTTLDGRSLTIPIT 308
P DL+ +D PH + GNDLVV + L +AL T++L TLDGR L I +
Sbjct: 415 FYGQPPHDLILTLDIAPHETYILYGNDLVVHWVLRLVDALAKCTINLKTLDGRYLKIKVD 474
Query: 309 SVINPGYEEVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLTADQKSGVKRLLGQ 362
V+ PGYE V++ EG PI + KGNLR+ FD+ FP L+ Q+ ++++L Q
Sbjct: 475 EVVYPGYELVIKDEGWPIGE--GLKGNLRIIFDVSFPKTLSGRQQHSIRQVLDQ 526
>Os03g0787300 Similar to DnaJ homolog
Length = 417
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 3/164 (1%)
Query: 200 KGTTKKMKISREIADASGKTIPVEE-ILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLV 258
KGT + + G+ + E+ +L + V+ G + G KITFP + +E P+ + D++
Sbjct: 193 KGTGETISDKDRCPGCKGEKVAQEKKVLEVVVEKGMQNGQKITFPGEADEAPDTVTGDII 252
Query: 259 FIIDEKPHPVFTRDGNDLVVTQKIPLAEALTGHTVHLTTLDGRSLTIPIT--SVINPGYE 316
F++ +K HP F R G+DL + L EAL G LT LD R L I V+ P
Sbjct: 253 FVLQQKEHPKFKRKGDDLFYEHTLNLTEALCGFQFVLTHLDNRQLLIKSKPGEVVKPDSF 312
Query: 317 EVVRGEGMPIPKDPSKKGNLRVKFDIKFPARLTADQKSGVKRLL 360
+ V EGMP+ + P KG L + F ++FP L DQ ++ +L
Sbjct: 313 KAVNDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPDQCKALETVL 356
>Os08g0161900 Similar to DnaJ-like protein
Length = 192
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 64/118 (54%), Gaps = 15/118 (12%)
Query: 1 MGMDYYKILGVXXXXXXXXXXXXYRKLAMKWHPDXX-XXXXXXXXXXXXQISEAYEVLSD 59
MGMDYY +L V YR++AMKWHPD +ISEAYEVLSD
Sbjct: 1 MGMDYYNVLKVNRNATEEDLKKSYRRMAMKWHPDKNPGDKKKEAEAKFKKISEAYEVLSD 60
Query: 60 PQKRAVYDQYGEEGLKGQVXXXXXXXXXXXXXTFFSTGGDGPNVFRFNPRNAEDIFAE 117
PQKRA+YD+YGEEGLK V S G+ RFNPRNAED+FAE
Sbjct: 61 PQKRAIYDKYGEEGLKASVDAGASS----------SMNGNR----RFNPRNAEDVFAE 104
>Os03g0648400 Similar to DnaJ protein homolog (DNAJ-1)
Length = 417
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Query: 218 KTIPVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLV 277
K I +++L + V+ G + KITFP + +E P+ + D+VF++ +K H F R G+DL
Sbjct: 213 KVIQEKKVLEVHVEKGMQHNQKITFPGEADEAPDTVTGDIVFVLQQKDHSKFKRKGDDLF 272
Query: 278 VTQKIPLAEALTGHTVHLTTLDGRSLTIPIT--SVINPGYEEVVRGEGMPIPKDPSKKGN 335
+ L EAL G LT LD R L I V+ P + + EGMP+ + P KG
Sbjct: 273 YEHTLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMKGK 332
Query: 336 LRVKFDIKFPARLTADQKSGVKRLL 360
L + F ++FP L +Q ++ +L
Sbjct: 333 LYIHFTVEFPDSLAPEQCKALEAVL 357
>Os04g0549600 Heat shock protein DnaJ family protein
Length = 416
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 216 SGKTIPVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGND 275
+ K I +++L + ++ G + G KI F + +E P+ + D+VFI+ K HP F R +D
Sbjct: 210 ASKVIQEKKVLEVHIEKGMQHGQKIVFQGEADEAPDTVTGDIVFILQVKVHPRFKRKYDD 269
Query: 276 LVVTQKIPLAEALTGHTVHLTTLDGRSLTIPIT--SVINPGYEEVVRGEGMPIPKDPSKK 333
L + + I L EAL G LT LD R L I +I PG + + EGMP P K
Sbjct: 270 LFIERTISLTEALCGFQFILTHLDSRQLLIKANPGEIIKPGQHKAINDEGMPHHGRPFMK 329
Query: 334 GNLRVKFDIKFPAR--LTADQKSGVKRLL 360
G L V+F+++FP L+ DQ ++ +L
Sbjct: 330 GRLFVEFNVEFPESGVLSRDQCRALEMIL 358
>Os02g0656500 DnaJ-like protein
Length = 420
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 218 KTIPVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLV 277
K + +++L + V+ G + G KI F + +E P+ + D+VF++ K HP F R +DL
Sbjct: 213 KVVQQKKVLEVHVEKGMQHGQKIVFQGEADEAPDTVTGDIVFVLQLKDHPKFKRKFDDLF 272
Query: 278 VTQKIPLAEALTGHTVHLTTLDGRSLTIPIT--SVINPGYEEVVRGEGMPIPKDPSKKGN 335
I L EAL G LT LDGR L I VI PG + + EGMP P KG
Sbjct: 273 TEHTISLTEALCGFQFVLTHLDGRQLLIKSNPGEVIKPGQHKAINDEGMPQHGRPFMKGR 332
Query: 336 LRVKFDIKF--PARLTADQKSGVKRLL 360
L V+F+++F P LT Q ++++L
Sbjct: 333 LFVEFNVEFPEPGALTPGQCRSLEKIL 359
>Os12g0619100
Length = 467
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Query: 224 EILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLVVTQKIP 283
++L + V+ G G +ITFP + + + N + DLV + +K H FTR G+DLV ++
Sbjct: 257 KVLELAVEKGVPDGHRITFPGEADVKENGVAGDLVMGLRQKKHGKFTRKGDDLVYEHELS 316
Query: 284 LAEALTGHTVHLTTLDGRSLTIPITS--VINPGYEEVVRGEGMPIPKDPSKKGNLRVKFD 341
LAEAL G +T LDGR L + + VI PG + + GEGMP+ P KG L V F
Sbjct: 317 LAEALCGFQFVITHLDGRRLLVTSGAGEVIRPGQLKAIDGEGMPVHGMPFAKGTLYVAFR 376
Query: 342 IKFPARLT 349
+ FP +T
Sbjct: 377 VAFPGTMT 384
>Os05g0156500 Similar to Apobec-1 binding protein 2
Length = 146
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 215 ASGKTIPVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGN 274
A+ K + + LT+D++ G + G +++F E+G + + P DL F I PH F R+GN
Sbjct: 1 ANVKYVREGDFLTVDIEKGMQDGQEVSFFEEGEPKIDGEPGDLKFRIRTAPHERFRREGN 60
Query: 275 DLVVTQKIPLAEALTGHTVHLTTLDGRSLTIPITSVINPGYEEVVRGEGMPIPKDPSKKG 334
DL T I L +AL G + LD + I + P +GEGMP+ + +KKG
Sbjct: 61 DLHTTVTISLLQALVGFEKTIKHLDNHMVEIGTKGITKPKEVRKFKGEGMPLYQ-SNKKG 119
Query: 335 NLRVKFDIKFPARLTADQKSGVKRLL 360
+L V F++ FP LT DQKS +K +L
Sbjct: 120 DLYVTFEVLFPKTLTDDQKSKLKSIL 145
>AK108884
Length = 424
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Query: 218 KTIPVEEILTIDVKPGWKKGTKITFPEKGNEQPNVIPADLVFIIDEKPHPVFTRDGNDLV 277
K + + +L + + G ++G +I + ++ P+ P D++F + E H F R G DL
Sbjct: 219 KVVEAKNVLELYIPRGAREGERIVLAGEADQLPDQEPGDIIFTLKETEHETFERAGADLR 278
Query: 278 VTQKIPLAEALTG-HTVHLTTLDGRSLTI----PITSVINPGYEEVVRGEGMPIPKDPSK 332
KI L EALTG + V LT LDGR + + P V+ PG V GEGMP+ K
Sbjct: 279 AELKISLVEALTGFNRVVLTHLDGRGIQLNVQQPNGKVLRPGQVLKVEGEGMPM-KRSDA 337
Query: 333 KGNLRVKFDIKFP 345
KG+L + DI+FP
Sbjct: 338 KGDLYLVVDIEFP 350
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.137 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,295,902
Number of extensions: 346251
Number of successful extensions: 846
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 838
Number of HSP's successfully gapped: 21
Length of query: 362
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 260
Effective length of database: 11,709,973
Effective search space: 3044592980
Effective search space used: 3044592980
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 157 (65.1 bits)