Os07g0513600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP40/DnaJ peptide-binding domain containing protein.
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Os07g0513600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP40/DnaJ peptide-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.68 | 0.452 | 6.3 | 0.417 | 1.21 | 1.12 | -0.855 | 0.455 | 0.434 | 21.5 | 21.36 | 1087 | -- | -- |
| 93.26 | 0.45 | 6.31 | 0.346 | 1.19 | 1.07 | -0.841 | -- | 0.427 | 21.4 | 21.4 | 1058 | -- | -- |
| 95.22 | 0.454 | 6.31 | 0.389 | 1.21 | 1.11 | -- | 0.228 | 0.422 | 21.4 | 21.33 | 1090 | -- | -- |
| 95.33 | 0.455 | 6.32 | 0.332 | 1.21 | 1.09 | -- | -- | 0.409 | 21.4 | 21.34 | 1073 | -- | -- |
| 166.57 | 0.601 | 6.29 | 0.306 | -- | 1.4 | -- | 0.152 | 0.338 | -- | 21.4 | 777 | -- | -- |
| 130.37 | 0.535 | 6.25 | 0.731 | 1.32 | -- | -0.829 | -- | 0.712 | 21.7 | -- | -- | -- | -- |
| 132.97 | 0.54 | 6.25 | 0.763 | 1.32 | -- | -- | -- | 0.713 | 21.7 | -- | -- | -- | -- |
| 165.96 | 0.6 | 6.31 | 0.323 | -- | 1.3 | -- | -- | 0.31 | -- | 21.9 | 782 | -- | -- |
| 97.86 | 0.461 | 6.33 | -- | 1.22 | 1.2 | -- | -- | 0.347 | 21.4 | 21.36 | 1122 | -- | -- |
| 237.05 | 0.719 | 6.21 | 0.774 | -- | -- | -- | -- | 0.711 | -- | -- | -- | -- | -- |
| 148.3 | 0.57 | 6.27 | -- | 1.33 | -- | -- | -- | 0.628 | 21.7 | -- | -- | -- | -- |
| 168.21 | 0.604 | 6.31 | -- | -- | 1.39 | -- | -- | 0.262 | -- | 21.8 | 788 | -- | -- |
| 252.86 | 0.742 | 6.23 | -- | -- | -- | -- | -- | 0.625 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 22 |
| 3 | 94.20 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 35 | 94.81 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 50 | 95.06 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 60 | 95.14 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 70 | 95.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 78 | 95.33 | temperature | 25 | 720 | < th | dose dependent | sin | 12 | NA |
| 157 | 97.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 160 | 97.38 | temperature | 20 | 720 | > th | dose independent | rect. | 13 | 18 |
| 166 | 97.65 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 184 | 97.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 213 | 98.06 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 222 | 98.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 241 | 98.23 | temperature | 20 | 720 | < th | dose independent | rect. | 16 | 15 |
| 249 | 98.26 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 341 | 98.54 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 425 | 98.75 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 692 | 99.21 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 22 |
| 801 | 99.44 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 906 | 99.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 8 |
| 931 | 99.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 948 | 99.71 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 957 | 99.72 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 11 |
| 959 | 99.73 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 961 | 99.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 21 |
| 966 | 99.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |