Os08g0161900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to DnaJ-like protein.
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Os08g0161900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to DnaJ-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.77 | 0.256 | 8.65 | 0.671 | 1.26 | -0.49 | -0.64 | 0.485 | 0.0899 | 8 | 51 | 1217 | -- | -- |
| 30.11 | 0.256 | 8.64 | 0.719 | 1.27 | -0.466 | -0.584 | -- | 0.101 | 8 | 49 | 1191 | -- | -- |
| 30.97 | 0.259 | 8.65 | 0.678 | 1.26 | -0.486 | -- | 0.393 | 0.0901 | 8 | 50.87 | 1223 | -- | -- |
| 31.11 | 0.26 | 8.64 | 0.702 | 1.29 | -0.501 | -- | -- | 0.102 | 8.05 | 48.4 | 1139 | -- | -- |
| 112.45 | 0.494 | 8.68 | 0.658 | -- | -0.505 | -- | 0.552 | 0.0997 | -- | 55 | 1397 | -- | -- |
| 34.43 | 0.275 | 8.64 | 0.746 | 1.24 | -- | -0.65 | -- | 0.118 | 7.7 | -- | -- | -- | -- |
| 35.63 | 0.28 | 8.64 | 0.73 | 1.24 | -- | -- | -- | 0.119 | 7.71 | -- | -- | -- | -- |
| 112.95 | 0.495 | 8.68 | 0.725 | -- | -0.466 | -- | -- | 0.111 | -- | 55.86 | 1398 | -- | -- |
| 43.94 | 0.309 | 8.66 | -- | 1.3 | -0.586 | -- | -- | 0.0229 | 8.06 | 35.29 | 1139 | -- | -- |
| 118.28 | 0.508 | 8.67 | 0.746 | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
| 49.67 | 0.33 | 8.66 | -- | 1.24 | -- | -- | -- | 0.0376 | 7.67 | -- | -- | -- | -- |
| 105.98 | 0.479 | 8.69 | -- | -- | 1.01 | -- | -- | 0.068 | -- | -15.99 | 564 | -- | -- |
| 132.96 | 0.538 | 8.69 | -- | -- | -- | -- | -- | 0.0541 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.04 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 17 | 11 |
| 3 | 28.18 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 5 | 28.28 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 13 | 28.73 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 15 | 28.75 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 11 |
| 20 | 28.84 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 22 | 28.90 | radiation | 1.0 | 30 | > th | dose independent | rect. | 17 | 16 |
| 27 | 28.95 | radiation | 1.0 | 30 | > th | dose independent | sin | 11 | NA |
| 30 | 28.99 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 31 | 29.00 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 22 |
| 33 | 29.00 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 13 | 15 |
| 39 | 29.03 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 12 | 16 |
| 60 | 29.14 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 13 |
| 62 | 29.15 | radiation | 1.0 | 30 | < th | dose independent | sin | 11 | NA |
| 69 | 29.18 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 80 | 29.24 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 83 | 29.25 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 12 |
| 95 | 29.28 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 98 | 29.28 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 103 | 29.30 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 109 | 29.32 | humidity | 90.0 | 10 | < th | dose independent | rect. | 15 | 18 |
| 110 | 29.32 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 119 | 29.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 123 | 29.37 | radiation | 1.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 128 | 29.38 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 137 | 29.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 140 | 29.41 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 158 | 29.43 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 164 | 29.45 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 167 | 29.45 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 168 | 29.45 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 171 | 29.46 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 196 | 29.49 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 21 | 7 |
| 198 | 29.50 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 199 | 29.50 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 236 | 29.53 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 259 | 29.56 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 2 |
| 266 | 29.57 | radiation | 20.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 271 | 29.58 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 11 |
| 282 | 29.60 | humidity | 90.0 | 10 | < th | dose independent | rect. | 19 | 14 |
| 300 | 29.61 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 324 | 29.62 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 326 | 29.62 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 341 | 29.63 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 17 |
| 345 | 29.63 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 355 | 29.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 2 |
| 363 | 29.64 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 13 |
| 364 | 29.64 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 15 |
| 366 | 29.64 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 367 | 29.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 379 | 29.65 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 384 | 29.65 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 398 | 29.65 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 419 | 29.67 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 442 | 29.69 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 500 | 29.73 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 532 | 29.74 | humidity | 90.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 552 | 29.75 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 583 | 29.77 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 586 | 29.77 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 591 | 29.78 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 594 | 29.78 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 597 | 29.78 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 598 | 29.78 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 4 |
| 600 | 29.78 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 601 | 29.78 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 603 | 29.78 | wind | 5.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 610 | 29.79 | radiation | 20.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 612 | 29.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 628 | 29.80 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 641 | 29.81 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 643 | 29.81 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 644 | 29.81 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 647 | 29.81 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 648 | 29.81 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 649 | 29.81 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 654 | 29.81 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 710 | 29.83 | humidity | 60.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 711 | 29.83 | humidity | 50.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 726 | 29.83 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 759 | 29.85 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 838 | 29.88 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 3 | 14 |
| 860 | 29.89 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 18 |
| 909 | 29.90 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 911 | 29.90 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 22 | NA |
| 945 | 29.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 948 | 29.91 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 993 | 29.93 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 997 | 29.93 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 21 | NA |