Os02g0656500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DnaJ-like protein.
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Os02g0656500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DnaJ-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.14 | 0.231 | 11.8 | 1.58 | 0.957 | -1.01 | -0.132 | 0.226 | 0.586 | 3.45 | 23.27 | 19 | -- | -- |
| 24.17 | 0.229 | 11.8 | 1.56 | 0.959 | -0.996 | -0.188 | -- | 0.581 | 3.45 | 23.25 | 18 | -- | -- |
| 24.17 | 0.231 | 11.8 | 1.6 | 0.969 | -1 | -- | 0.36 | 0.594 | 3.52 | 22.97 | 18 | -- | -- |
| 24.25 | 0.229 | 11.8 | 1.55 | 0.967 | -0.983 | -- | -- | 0.581 | 3.45 | 22.98 | 18 | -- | -- |
| 56.58 | 0.35 | 11.8 | 1.88 | -- | -1.91 | -- | 1.48 | 0.73 | -- | 24.1 | 41 | -- | -- |
| 39.34 | 0.294 | 11.8 | 1.37 | 1.35 | -- | 0.133 | -- | 0.433 | 3.28 | -- | -- | -- | -- |
| 39.4 | 0.294 | 11.8 | 1.36 | 1.35 | -- | -- | -- | 0.432 | 3.28 | -- | -- | -- | -- |
| 57.02 | 0.352 | 11.8 | 1.69 | -- | -1.84 | -- | -- | 0.658 | -- | 24.04 | 32 | -- | -- |
| 82.88 | 0.426 | 11.9 | -- | 1.15 | -0.599 | -- | -- | 0.323 | 3.37 | 24.8 | 8 | -- | -- |
| 142.74 | 0.558 | 11.8 | 1.42 | -- | -- | -- | -- | 0.468 | -- | -- | -- | -- | -- |
| 88.43 | 0.44 | 11.9 | -- | 1.38 | -- | -- | -- | 0.28 | 3.28 | -- | -- | -- | -- |
| 131.1 | 0.535 | 11.8 | -- | -- | -1.59 | -- | -- | 0.453 | -- | 24.2 | 26 | -- | -- |
| 196.02 | 0.654 | 11.9 | -- | -- | -- | -- | -- | 0.31 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.50 | temperature | 30 | 10 | < th | dose dependent | sin | 23 | NA |
| 5 | 18.80 | temperature | 10 | 10 | > th | dose dependent | sin | 0 | NA |
| 71 | 22.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 96 | 23.16 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 102 | 23.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 130 | 23.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 11 |
| 139 | 23.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 15 |
| 141 | 23.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 146 | 23.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 12 |
| 150 | 24.03 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 10 |
| 177 | 24.26 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 16 |
| 180 | 24.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 14 |
| 191 | 24.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 15 |
| 192 | 24.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 11 |
| 287 | 24.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 358 | 25.03 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 375 | 25.12 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 383 | 25.12 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 461 | 25.29 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 601 | 25.55 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 6 |
| 680 | 25.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 682 | 25.70 | temperature | 25 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 854 | 26.09 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 3 |
| 868 | 26.11 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 983 | 26.40 | temperature | 25 | 30 | < th | dose independent | sin | 23 | NA |