Os02g0306900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to DnaJ-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0306900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to DnaJ-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.37 | 0.283 | 7.71 | -0.754 | 0.711 | 0.383 | -1.02 | 0.331 | -0.428 | 5.39 | 86 | 1520 | -- | -- |
| 36.56 | 0.282 | 7.72 | -0.754 | 0.7 | 0.395 | -1.02 | -- | -0.435 | 5.36 | 87.04 | 1505 | -- | -- |
| 38.38 | 0.289 | 7.71 | -0.717 | 0.809 | 0.401 | -- | 0.565 | -0.41 | 5.81 | 84.86 | 1938 | -- | -- |
| 38.77 | 0.29 | 7.72 | -0.77 | 0.666 | 0.446 | -- | -- | -0.472 | 5.91 | 93.97 | 1328 | -- | -- |
| 63.78 | 0.372 | 7.74 | -0.657 | -- | 0.395 | -- | 1.22 | -0.429 | -- | 75.31 | 6994 | -- | -- |
| 40.92 | 0.3 | 7.72 | -0.736 | 0.709 | -- | -0.944 | -- | -0.439 | 5.44 | -- | -- | -- | -- |
| 43.02 | 0.307 | 7.72 | -0.738 | 0.705 | -- | -- | -- | -0.434 | 5.67 | -- | -- | -- | -- |
| 61.59 | 0.366 | 7.73 | -0.771 | -- | 0.553 | -- | -- | -0.421 | -- | 89 | 1293 | -- | -- |
| 54.02 | 0.342 | 7.7 | -- | 0.794 | 0.421 | -- | -- | -0.375 | 5.78 | 98.73 | 1980 | -- | -- |
| 68.85 | 0.388 | 7.73 | -0.715 | -- | -- | -- | -- | -0.418 | -- | -- | -- | -- | -- |
| 57.36 | 0.354 | 7.7 | -- | 0.694 | -- | -- | -- | -0.352 | 5.71 | -- | -- | -- | -- |
| 76.32 | 0.407 | 7.74 | -- | -- | 0.577 | -- | -- | -0.384 | -- | 67.48 | 17077 | -- | -- |
| 82.34 | 0.424 | 7.71 | -- | -- | -- | -- | -- | -0.338 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.98 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 2 | 33.05 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 5 | 33.09 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 7 | 33.12 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 10 | 33.16 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 11 | 33.20 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 13 | 33.21 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 17 | 33.24 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 18 | 33.24 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 22 | 33.30 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 26 | 33.33 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 32 | 33.40 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 41 | 33.57 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 52 | 33.70 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 60 | 33.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 11 |
| 62 | 33.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 11 |
| 65 | 33.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 11 |
| 78 | 33.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 79 | 33.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 86 | 33.91 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 91 | 33.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 148 | 34.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 150 | 34.14 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 170 | 34.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 174 | 34.20 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 180 | 34.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 183 | 34.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 209 | 34.26 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 9 |
| 222 | 34.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 13 |
| 292 | 34.42 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 23 | NA |
| 293 | 34.42 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 23 | NA |
| 310 | 34.46 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 23 | NA |
| 316 | 34.47 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 479 | 34.71 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 19 |
| 487 | 34.72 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 19 |
| 499 | 34.73 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 512 | 34.74 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 2 | 11 |
| 524 | 34.75 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 532 | 34.75 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 536 | 34.76 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 567 | 34.79 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 582 | 34.80 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 617 | 34.82 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 21 |
| 634 | 34.83 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 643 | 34.84 | humidity | 60.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 674 | 34.86 | humidity | 60.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 690 | 34.87 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 700 | 34.88 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 725 | 34.89 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 9 |
| 764 | 34.91 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 800 | 34.92 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 18 |
| 853 | 34.95 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 873 | 34.96 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 18 |
| 877 | 34.97 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 926 | 34.99 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 931 | 35.00 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 950 | 35.00 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 16 |