Os08g0374400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to DnaJ-like protein.
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Os08g0374400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to DnaJ-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 199.26 | 0.663 | 3.74 | 0.673 | 0.76 | -0.831 | -0.25 | -2.04 | 0.664 | 5.03 | 84.99 | 5292 | -- | -- |
| 204.53 | 0.666 | 3.74 | 0.78 | 0.746 | -0.957 | -0.226 | -- | 0.7 | 4.96 | 83.99 | 5278 | -- | -- |
| 199.42 | 0.658 | 3.74 | 0.676 | 0.758 | -0.835 | -- | -2.04 | 0.666 | 5.02 | 85 | 5284 | -- | -- |
| 204.66 | 0.666 | 3.74 | 0.779 | 0.746 | -0.96 | -- | -- | 0.7 | 4.97 | 84 | 5278 | -- | -- |
| 224.28 | 0.697 | 3.73 | 0.718 | -- | -1.07 | -- | -1.59 | 0.733 | -- | 85.04 | 4895 | -- | -- |
| 215.55 | 0.688 | 3.76 | 0.795 | 0.773 | -- | -0.249 | -- | 0.567 | 5.43 | -- | -- | -- | -- |
| 215.7 | 0.688 | 3.76 | 0.794 | 0.771 | -- | -- | -- | 0.568 | 5.45 | -- | -- | -- | -- |
| 227.73 | 0.703 | 3.73 | 0.801 | -- | -1.16 | -- | -- | 0.768 | -- | 85 | 4880 | -- | -- |
| 219.94 | 0.691 | 3.74 | -- | 0.789 | -0.984 | -- | -- | 0.673 | 5.06 | 87.99 | 6760 | -- | -- |
| 246.67 | 0.734 | 3.77 | 0.82 | -- | -- | -- | -- | 0.587 | -- | -- | -- | -- | -- |
| 232.33 | 0.713 | 3.78 | -- | 0.785 | -- | -- | -- | 0.48 | 5.41 | -- | -- | -- | -- |
| 244.32 | 0.728 | 3.74 | -- | -- | -1.22 | -- | -- | 0.746 | -- | 89 | 4878 | -- | -- |
| 264.41 | 0.759 | 3.79 | -- | -- | -- | -- | -- | 0.496 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 189.82 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 2 | 190.06 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 3 | 190.16 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 5 | 190.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 6 | 190.69 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 7 | 190.69 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 14 | 3 |
| 9 | 190.73 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 11 | 190.83 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 12 | 190.83 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 17 | 190.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 18 | 190.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 25 | 191.23 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 26 | 191.23 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 27 | 191.28 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 37 | 191.46 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 42 | 191.53 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 7 |
| 50 | 191.72 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 51 | 191.72 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 52 | 191.77 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 76 | 192.32 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 81 | 192.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 82 | 192.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 88 | 192.46 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 92 | 192.51 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 93 | 192.52 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 94 | 192.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 95 | 192.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 97 | 192.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 102 | 192.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 103 | 192.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 108 | 192.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 111 | 192.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 6 |
| 117 | 192.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 118 | 192.73 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 124 | 192.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 131 | 192.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 138 | 192.84 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 155 | 192.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 158 | 193.00 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 7 |
| 163 | 193.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 165 | 193.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 166 | 193.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 20 |
| 171 | 193.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 172 | 193.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 183 | 193.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 185 | 193.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 188 | 193.16 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 195 | 193.17 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 10 |
| 200 | 193.18 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 207 | 193.23 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 218 | 193.27 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 10 |
| 219 | 193.27 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 10 |
| 221 | 193.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 234 | 193.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 255 | 193.47 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 256 | 193.47 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 263 | 193.50 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 10 |
| 276 | 193.57 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 304 | 193.73 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 306 | 193.75 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 307 | 193.75 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 311 | 193.77 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 330 | 193.86 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 349 | 193.91 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 412 | 194.09 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 419 | 194.10 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 420 | 194.11 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 422 | 194.12 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 7 |
| 438 | 194.19 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 440 | 194.19 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 443 | 194.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 468 | 194.29 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 481 | 194.33 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 484 | 194.33 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 490 | 194.34 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 511 | 194.42 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 529 | 194.47 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 531 | 194.47 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 604 | 194.64 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 609 | 194.64 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 610 | 194.64 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 632 | 194.71 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 7 |
| 661 | 194.76 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 662 | 194.76 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 680 | 194.82 | wind | 1.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 706 | 194.88 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 707 | 194.88 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 711 | 194.89 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 717 | 194.90 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 729 | 194.93 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 7 |
| 749 | 194.98 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 755 | 195.00 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 757 | 195.00 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 797 | 195.08 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 16 |
| 819 | 195.13 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 7 |
| 823 | 195.14 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 5 |
| 878 | 195.28 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 944 | 195.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 972 | 195.55 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 976 | 195.56 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 15 |
| 984 | 195.58 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |