Os02g0128400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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Os02g0128400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.55 | 0.386 | 8.57 | 0.531 | 0.315 | 0.564 | 0.986 | 2.07 | 0.385 | 4.04 | 21.43 | 1654 | -- | -- |
| 75.17 | 0.404 | 8.66 | 0.0454 | 0.33 | 0.445 | 0.96 | -- | 0.191 | 4.51 | 23.6 | 2242 | -- | -- |
| 69.43 | 0.388 | 8.57 | 0.548 | 0.308 | 0.535 | -- | 2.15 | 0.384 | 3.48 | 21.49 | 1398 | -- | -- |
| 77.07 | 0.409 | 8.65 | -0.0172 | 0.279 | 0.42 | -- | -- | 0.207 | 4.15 | 23.8 | 2245 | -- | -- |
| 74.41 | 0.402 | 8.57 | 0.567 | -- | 0.564 | -- | 2.22 | 0.397 | -- | 21.5 | 1356 | -- | -- |
| 82.19 | 0.425 | 8.61 | 0.167 | 0.309 | -- | 0.882 | -- | 0.384 | 4 | -- | -- | -- | -- |
| 84.3 | 0.43 | 8.61 | 0.156 | 0.314 | -- | -- | -- | 0.379 | 3.41 | -- | -- | -- | -- |
| 80.34 | 0.417 | 8.65 | -0.0443 | -- | 0.561 | -- | -- | 0.223 | -- | 24.4 | 2688 | -- | -- |
| 77.08 | 0.409 | 8.65 | -- | 0.279 | 0.42 | -- | -- | 0.207 | 4.14 | 23.8 | 2245 | -- | -- |
| 89.84 | 0.443 | 8.61 | 0.169 | -- | -- | -- | -- | 0.387 | -- | -- | -- | -- | -- |
| 84.94 | 0.431 | 8.62 | -- | 0.317 | -- | -- | -- | 0.362 | 3.41 | -- | -- | -- | -- |
| 80.36 | 0.418 | 8.65 | -- | -- | 0.554 | -- | -- | 0.213 | -- | 24.43 | 2651 | -- | -- |
| 90.6 | 0.444 | 8.62 | -- | -- | -- | -- | -- | 0.368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.28 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 2 | 64.37 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 5 | 65.40 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 6 | 65.40 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 11 | 67.02 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 12 | 67.11 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 13 | 67.23 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 26 | 68.39 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 27 | 68.39 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 29 | 68.45 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 41 | 68.60 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 48 | 68.73 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 52 | 68.89 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 53 | 68.93 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 70 | 69.17 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 104 | 69.83 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 106 | 69.84 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 125 | 70.07 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 126 | 70.07 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 128 | 70.09 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 130 | 70.10 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 13 |
| 136 | 70.12 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 186 | 70.30 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 7 |
| 187 | 70.30 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 12 |
| 188 | 70.30 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 189 | 70.30 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 198 | 70.33 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 14 |
| 201 | 70.34 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 220 | 70.39 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 13 |
| 229 | 70.41 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 249 | 70.45 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 294 | 70.56 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 307 | 70.59 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 310 | 70.59 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 316 | 70.60 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 328 | 70.63 | temperature | 20.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 332 | 70.63 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 350 | 70.68 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 356 | 70.69 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 23 | 4 |
| 363 | 70.70 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 374 | 70.71 | temperature | 20.0 | 4320 | < th | dose independent | sin | 16 | NA |
| 384 | 70.72 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 426 | 70.76 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 595 | 70.94 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 722 | 71.06 | temperature | 20.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 746 | 71.08 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 803 | 71.14 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 817 | 71.15 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 982 | 71.27 | humidity | 80.0 | 1440 | < th | dose independent | sin | 6 | NA |