BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0535300 Os05g0535300|014-054-F01
(177 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0535300 Conserved hypothetical protein 372 e-103
Os05g0532300 182 1e-46
Os05g0531800 181 2e-46
Os05g0538200 114 6e-26
Os09g0325220 Cyclin-like F-box domain containing protein 104 4e-23
Os05g0571700 Cyclin-like F-box domain containing protein 102 1e-22
Os09g0506700 Cyclin-like F-box domain containing protein 101 3e-22
Os03g0202500 Cyclin-like F-box domain containing protein 99 1e-21
Os04g0479800 Cyclin-like F-box domain containing protein 96 1e-20
Os04g0479500 Conserved hypothetical protein 91 4e-19
Os03g0217200 Cyclin-like F-box domain containing protein 86 1e-17
Os06g0142100 Cyclin-like F-box domain containing protein 82 2e-16
Os02g0105600 Conserved hypothetical protein 79 1e-15
Os05g0535200 Cyclin-like F-box domain containing protein 77 6e-15
Os02g0105800 Cyclin-like F-box domain containing protein 77 7e-15
Os11g0527300 Hypothetical protein 75 3e-14
Os06g0139000 Conserved hypothetical protein 75 3e-14
Os04g0626600 Conserved hypothetical protein 72 2e-13
Os09g0562400 Similar to mutator-like transposase [Oryza sat... 72 3e-13
Os08g0552900 Cyclin-like F-box domain containing protein 66 1e-11
Os04g0626700 Leucine-rich repeat 2 containing protein 64 7e-11
>Os05g0535300 Conserved hypothetical protein
Length = 177
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/177 (100%), Positives = 177/177 (100%)
Query: 1 MSMQQEQTRPRRLVQSCNESVASLAKRNGSPCQQGDDYQGVKTMRNPWAFLPEVSQTRME 60
MSMQQEQTRPRRLVQSCNESVASLAKRNGSPCQQGDDYQGVKTMRNPWAFLPEVSQTRME
Sbjct: 1 MSMQQEQTRPRRLVQSCNESVASLAKRNGSPCQQGDDYQGVKTMRNPWAFLPEVSQTRME 60
Query: 61 HDVISEDSSHLRQMPGHHHDTIKNVKIMVELTCHILENATSLEGLTLDTIFDGNNNPADR 120
HDVISEDSSHLRQMPGHHHDTIKNVKIMVELTCHILENATSLEGLTLDTIFDGNNNPADR
Sbjct: 61 HDVISEDSSHLRQMPGHHHDTIKNVKIMVELTCHILENATSLEGLTLDTIFDGNNNPADR 120
Query: 121 LSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVKLDVLKPCSWCHTNSSVE 177
LSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVKLDVLKPCSWCHTNSSVE
Sbjct: 121 LSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVKLDVLKPCSWCHTNSSVE 177
>Os05g0532300
Length = 669
Score = 182 bits (462), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 102/131 (77%), Gaps = 9/131 (6%)
Query: 50 FLPEVSQTRMEHDVISEDSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENATS 101
F VSQ RMEHDVISE+SSHLRQMP H IKNV I M+ELTCHILENATS
Sbjct: 394 FTLIVSQIRMEHDVISENSSHLRQMPRSSHGNIKNVNIIGFCSAKSMIELTCHILENATS 453
Query: 102 LEGLTLDTIFDGNNNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVKL 161
LE LTLDTI D +P DRLSVHEVG CGRI SPM+MEA+NALLAI+RYIVGKVPSTVKL
Sbjct: 454 LECLTLDTIHDDYVHP-DRLSVHEVGFCGRIGSPMIMEAENALLAIKRYIVGKVPSTVKL 512
Query: 162 DVLKPCSWCHT 172
VLKPC WCH
Sbjct: 513 VVLKPCGWCHA 523
>Os05g0531800
Length = 376
Score = 181 bits (459), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/135 (71%), Positives = 102/135 (75%), Gaps = 9/135 (6%)
Query: 50 FLPEVSQTRMEHDVISEDSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENATS 101
F VSQ RMEHDVISEDSSHLRQMP H IKNV I M+ELTCHILENATS
Sbjct: 235 FTLIVSQIRMEHDVISEDSSHLRQMPRSIHGNIKNVNIIGFCSAKSMIELTCHILENATS 294
Query: 102 LEGLTLDTIFDGNNNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVKL 161
LE LTLDTI D +P DRLSVHEVG CG I SPM+MEA+NALLAI+RYIVGKVPSTVKL
Sbjct: 295 LECLTLDTIHDDYVHP-DRLSVHEVGFCGCIGSPMIMEAENALLAIKRYIVGKVPSTVKL 353
Query: 162 DVLKPCSWCHTNSSV 176
VLKPC WCH +
Sbjct: 354 VVLKPCGWCHATKGL 368
>Os05g0538200
Length = 592
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 82/132 (62%), Gaps = 13/132 (9%)
Query: 53 EVSQTRMEHDVISEDSS-HLRQMPGHHHDTIKNVKI--------MVELTCHILENATSLE 103
EV Q M+HD +S D++ +LR MPGH H+ +K V I MVELTCHILEN TSLE
Sbjct: 336 EVQQGGMKHDSVSGDTTTNLRTMPGHKHERLKEVMIIGFCSATSMVELTCHILENTTSLE 395
Query: 104 GLTLDTIFD----GNNNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTV 159
+TLD + D N ++ + G C + M++EA ++AIERYI GKVPS V
Sbjct: 396 TITLDAVCDVHDLENIGRCCTTTIRKTGSCYPLRREMILEAHRGVMAIERYIRGKVPSIV 455
Query: 160 KLDVLKPCSWCH 171
+L + +PC+WCH
Sbjct: 456 ELTIREPCTWCH 467
>Os09g0325220 Cyclin-like F-box domain containing protein
Length = 525
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 81/131 (61%), Gaps = 14/131 (10%)
Query: 49 AFLPEVSQTRMEHDVISEDSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENAT 100
F+ +VS ++D I E+ SHLRQ+P HD ++NVKI + ELT HILEN T
Sbjct: 385 TFIVDVSAKHPKNDSIFENPSHLRQLPEQRHDNLRNVKITGFRSAKSLFELTYHILEN-T 443
Query: 101 SLEGLTLDTIFDGNNNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVK 160
S+E LTLDT F+ + R S + GRC + MEA AL AI YI GKVPSTV+
Sbjct: 444 SVECLTLDTSFE-----SFRCSPGKPGRCLQTSKDDPMEASKALFAIRTYIEGKVPSTVR 498
Query: 161 LDVLKPCSWCH 171
L+V++PCS CH
Sbjct: 499 LNVVEPCSRCH 509
>Os05g0571700 Cyclin-like F-box domain containing protein
Length = 517
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 79/131 (60%), Gaps = 13/131 (9%)
Query: 50 FLPEVSQTRMEHDVISEDSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENATS 101
F+ + R E I D S LR MP H HD +K VKI +VELTCHI+E+AT+
Sbjct: 389 FILNALRERTERATIFGDPSGLRMMPEHRHDKLKCVKIINFSSVKTLVELTCHIVESATA 448
Query: 102 LEGLTLDTIFDGNNNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVKL 161
LE LTLDT + + R SV+ +G+C + +MEA AL A++ YI KVPS V+L
Sbjct: 449 LECLTLDT-----TSGSPRCSVNRLGKCFLMRRETLMEAHRALKAVQTYIELKVPSKVEL 503
Query: 162 DVLKPCSWCHT 172
+VL+PCS CH
Sbjct: 504 NVLEPCSRCHA 514
>Os09g0506700 Cyclin-like F-box domain containing protein
Length = 504
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 78/134 (58%), Gaps = 15/134 (11%)
Query: 50 FLPEVSQTRMEHDVISEDSSHLRQMPGHH-HDTIKNVKI--------MVELTCHILENAT 100
F +VSQ RM H I DS LRQMP HH H +++VKI ++ELTC+IL+N T
Sbjct: 377 FFLDVSQERMGHVSIFGDSLQLRQMPEHHRHGNLQSVKITGFCSAKSLIELTCYILDNTT 436
Query: 101 SLEGLTLDTIFDGNNNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVK 160
SL+ LTLDT S E +C I M+ EA A+LAIE +I KVPSTVK
Sbjct: 437 SLKCLTLDT-----TRGVSSCSTGEHKKCFPI-GKMLTEANRAVLAIETFIERKVPSTVK 490
Query: 161 LDVLKPCSWCHTNS 174
L V KPCS CH S
Sbjct: 491 LAVTKPCSRCHVKS 504
>Os03g0202500 Cyclin-like F-box domain containing protein
Length = 510
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 19/131 (14%)
Query: 56 QTRMEHDVISEDSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENATSLEGLTL 107
+ RME+++I D SH+RQM H HD +++V+I ++ELTCHIL+N TSL+ L L
Sbjct: 388 EDRMENELIIGDMSHMRQMLEHRHDNLQSVEIIGFCYTKSLIELTCHILDNTTSLKHLKL 447
Query: 108 DT---IFDGNNNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVKLDVL 164
DT +F + D+ C + M+ EAK A+LAIE YI KVPSTV L+V+
Sbjct: 448 DTTRDVFSCSTGKHDK--------CFHMGKDMLTEAKKAVLAIETYIEPKVPSTVMLNVV 499
Query: 165 KPCSWCHTNSS 175
KPC+ CH S
Sbjct: 500 KPCNRCHVAES 510
>Os04g0479800 Cyclin-like F-box domain containing protein
Length = 518
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 82/157 (52%), Gaps = 19/157 (12%)
Query: 28 NGSPCQQGDDYQGVKTMRNPW----AFLPEVSQTRMEHDVISEDSSHLRQMPGHHHDTIK 83
GS Q DY + + + + V+Q RM H+ I DS LR +PGH H +K
Sbjct: 365 TGSTISQPYDYFSLVSFIDASPSLETLILNVTQVRMVHESIFTDS-QLRHIPGHRHGHLK 423
Query: 84 NVKI--------MVELTCHILENATSLEGLTLDTIFDGNNNPADRLSVHEVGRCGRIHSP 135
+VKI +VELTC+IL NA SLE LTLDTI+ R + RC +
Sbjct: 424 SVKITGFSSAKSLVELTCYILNNAVSLECLTLDTIY------GPRCDQDKYRRCFPMIDG 477
Query: 136 MVMEAKNALLAIERYIVGKVPSTVKLDVLKPCSWCHT 172
++ +A L AI YI KVPSTV L VL+PCS CH
Sbjct: 478 VLTDAPRGLAAIRTYIEDKVPSTVNLTVLEPCSRCHV 514
>Os04g0479500 Conserved hypothetical protein
Length = 227
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 82/161 (50%), Gaps = 18/161 (11%)
Query: 28 NGSPCQQGDDYQGVKTMRNPWAFLPEV---SQTRMEHDVISEDSSHLRQMPGHHHDTIKN 84
GS + DY + + N L + RM ++ I DS LR +P HHH +K+
Sbjct: 63 TGSTISRPYDYFSLVSFINASPSLETLILNVTLRMVNESIFTDS-QLRHIPEHHHGHLKS 121
Query: 85 VKI--------MVELTCHILENATSLEGLTLDTIFDGNNNPADRLSVHEVGRCGRIHSPM 136
VKI +VELTC+IL NA SLE LTLDTI+ R + RC + +
Sbjct: 122 VKITGFSSAKSLVELTCYILNNAVSLECLTLDTIY------GPRCDQDKYRRCFPMIDGV 175
Query: 137 VMEAKNALLAIERYIVGKVPSTVKLDVLKPCSWCHTNSSVE 177
+ EA L AI YI KVPSTV L VL+PCS CH V+
Sbjct: 176 LTEAPRGLAAIRTYIEDKVPSTVNLTVLEPCSRCHVRRRVQ 216
>Os03g0217200 Cyclin-like F-box domain containing protein
Length = 511
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 60 EHDVISEDSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENATSLEGLTLDTIF 111
+HD+ D + RQM HD++KNVKI +VELTCHIL+N TSLE LTLDT
Sbjct: 395 KHDLTLRDPIYPRQMSERQHDSLKNVKINGFSSTKSLVELTCHILQNTTSLECLTLDT-- 452
Query: 112 DGNNNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVKLDVLKPCSWCH 171
R S V C + A ALLAI YI G VP+TVK VL+PC C+
Sbjct: 453 ---TRIEFRCSDSSVDVCLPSDRDAIKGAHKALLAIRTYIEGIVPATVKFSVLEPCRRCY 509
Query: 172 T 172
Sbjct: 510 A 510
>Os06g0142100 Cyclin-like F-box domain containing protein
Length = 512
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 16/132 (12%)
Query: 50 FLPEVSQTRMEHDVISEDSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENATS 101
F V Q +++ I + LR + H ++K+V++ +VELTCHILE+ TS
Sbjct: 383 FYLTVMQRYVQNVSIFAHPADLRSIREEQHHSLKSVRVTSFISVKSLVELTCHILESTTS 442
Query: 102 LEGLTLDTIFDGN--NNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTV 159
LE LTLD G + P + +G+C + ++ME +LAI RYI +VPSTV
Sbjct: 443 LECLTLDASQTGFRCDTPGSK-----IGKCPPLDRDIIMEGHRGVLAIRRYIQPRVPSTV 497
Query: 160 KLDVLKPCSWCH 171
KL+VL+PCS CH
Sbjct: 498 KLNVLEPCS-CH 508
>Os02g0105600 Conserved hypothetical protein
Length = 188
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 14/130 (10%)
Query: 53 EVSQTRMEHDVISEDSS-HLRQMPGHHHDTIKNVKIM--------VELTCHILENATSLE 103
+V Q M H+ I E SS HLRQ+P HD +K+VKI+ VELTC I++ A SLE
Sbjct: 59 DVCQDDMAHESIIESSSPHLRQLPELSHDCLKSVKILGFNSAKSLVELTCGIVKAAVSLE 118
Query: 104 GLTLDTIFDGNNNPADRLSVHEVGR-CGRIHSPMVMEAKNALLAIERYIVGKVPSTVKLD 162
L LDT+ G+ DR G+ C + + ++ E+ A +A+ RYI KV L
Sbjct: 119 RLVLDTLRGGD----DRCCGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVSPITTLT 174
Query: 163 VLKPCSWCHT 172
+++PC+ CH+
Sbjct: 175 LVEPCTRCHS 184
>Os05g0535200 Cyclin-like F-box domain containing protein
Length = 402
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 41/52 (78%)
Query: 2 SMQQEQTRPRRLVQSCNESVASLAKRNGSPCQQGDDYQGVKTMRNPWAFLPE 53
S+++ + PRR VQ+ + SVASLAKR GSPCQQ DDY+G KTM NPW FLPE
Sbjct: 3 SVERITSMPRRQVQARDGSVASLAKRTGSPCQQEDDYEGAKTMTNPWTFLPE 54
>Os02g0105800 Cyclin-like F-box domain containing protein
Length = 527
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 15/130 (11%)
Query: 53 EVSQTRMEHDVISEDSS-HLRQMPGHHHDTIKNVKI--------MVELTCHILENATSLE 103
+V Q M H+ I EDSS HLRQ+P H+ +K+V+I +VELTC I++ A SLE
Sbjct: 399 DVFQEDMRHESIVEDSSAHLRQLPELSHECLKSVEIIGFNSAKSLVELTCCIVKAAASLE 458
Query: 104 GLTLDTIFDGNNNPADRLSVHEVGR-CGRIHSPMVMEAKNALLAIERYIVGKVPSTVKLD 162
L LDT+ G DR S G+ C + + ++ E+ A +A+ RYI KV T L
Sbjct: 459 RLVLDTLRGG-----DRCSGESNGKICWPVSNAVLKESARAAIAVRRYIEDKVAPTTTLT 513
Query: 163 VLKPCSWCHT 172
++ C+ CH+
Sbjct: 514 LVGTCTRCHS 523
>Os11g0527300 Hypothetical protein
Length = 261
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 68/130 (52%), Gaps = 22/130 (16%)
Query: 60 EHDVISEDSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENATSLEGLTLDTIF 111
++D I EDSS LR++P ++ +KNVKI +VEL HIL+N SLE LTLDT
Sbjct: 118 KNDRILEDSSELRKLPKCNYSNLKNVKITGLMSSKTLVELISHILDNTPSLEFLTLDTRI 177
Query: 112 DGNNNPADRLSVHEVGRC----GRIHSPM----------VMEAKNALLAIERYIVGKVPS 157
G R + G R+ S + ++EA A I RYI GKVPS
Sbjct: 178 YGFKYEIRRFISWDCGIMMTTDDRMESELDRELLMSDSDLIEAYRAPQVIRRYIEGKVPS 237
Query: 158 TVKLDVLKPC 167
TV +V++PC
Sbjct: 238 TVNFEVIEPC 247
>Os06g0139000 Conserved hypothetical protein
Length = 446
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 8/92 (8%)
Query: 84 NVKIMVELTCHILENATSLEGLTLDTIFDGN--NNPADRLSVHEVGRCGRIHSPMVMEAK 141
+VK +VELTCHILE+ SLE LTLD G + P ++S +C + ++ME
Sbjct: 359 SVKSLVELTCHILESTASLECLTLDASQTGFRCDTPGSKIS-----KCPPLDRDIIMEGH 413
Query: 142 NALLAIERYIVGKVPSTVKLDVLKPCSWCHTN 173
+LAI RYI +VPSTVKL VL+PCS CH+
Sbjct: 414 RGVLAIRRYIQPRVPSTVKLTVLEPCS-CHST 444
>Os04g0626600 Conserved hypothetical protein
Length = 243
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 18/119 (15%)
Query: 63 VISEDSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENATSLEGLTLDT--IFD 112
++ + ++LRQ+ H ++NV I M+ELT HILENA SL+ +TLDT +D
Sbjct: 130 ILDGEHTNLRQILHPRHANLQNVTITGFNSTKSMIELTSHILENAPSLKCITLDTANFYD 189
Query: 113 GNNNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVKLDVLKPCSWCH 171
N + +G C + ++EA+ A A +RYI GKVP+ V+ L+PC CH
Sbjct: 190 KN--------LLTMGECLPMRKGGILEARKAFDAAKRYIAGKVPAHVEYKFLEPCRKCH 240
>Os09g0562400 Similar to mutator-like transposase [Oryza sativa (japonica
cultivar-group)]
Length = 1972
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 18/113 (15%)
Query: 67 DSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENATSLEGLTLDTIFDGNNNPA 118
DS +R++P HH +K V I ++ELT I+ENA+SL+ L LD + + +
Sbjct: 1863 DSLQIRRIPEIHHANLKKVSINRFFPSKSLIELTYLIIENASSLQCLKLDAGYGFDTS-- 1920
Query: 119 DRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVKLDVLKPCSWCH 171
G C R++ V+ A +A+ ++YI GKVPS+VK ++L+PC CH
Sbjct: 1921 --------GMCKRMNKLDVLHALSAVEVAKKYIEGKVPSSVKFNILEPCERCH 1965
>Os08g0552900 Cyclin-like F-box domain containing protein
Length = 480
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 8/67 (11%)
Query: 54 VSQTRMEHDVISEDSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENATSLEGL 105
VSQ M+H+ + DSS LRQMP H H +K+VK+ ++ELTC+IL+NA SLE L
Sbjct: 404 VSQEHMKHESVLGDSSPLRQMPEHRHCYLKSVKMTGFSSAKNLIELTCYILKNAVSLECL 463
Query: 106 TLDTIFD 112
TLDT+++
Sbjct: 464 TLDTLYE 470
>Os04g0626700 Leucine-rich repeat 2 containing protein
Length = 364
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 49 AFLPEVSQTRMEHD-VISEDSSHLRQMPGHHHDTIKNVKI--------MVELTCHILENA 99
F+ V Q HD ++ + + LR++ H ++NV I M+ELT HILENA
Sbjct: 236 TFILHVEQQFERHDSILDGEPTDLRRILHDGHANLQNVTITGFNSTKSMIELTTHILENA 295
Query: 100 TSLEGLTLDTI-FDGNNNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPST 158
SL+ +TLDT F G N+ A +G C + ++EA+ A A R+I GK+PS
Sbjct: 296 PSLKCITLDTANFSGKNHLA-------MGECSPMMRGGILEARRAFEAARRHIAGKIPSF 348
Query: 159 VKLDVLKPCSWCH 171
V+ L+PC CH
Sbjct: 349 VEYKFLEPCRHCH 361
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.130 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,711,223
Number of extensions: 211893
Number of successful extensions: 560
Number of sequences better than 1.0e-10: 21
Number of HSP's gapped: 534
Number of HSP's successfully gapped: 21
Length of query: 177
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 83
Effective length of database: 12,127,685
Effective search space: 1006597855
Effective search space used: 1006597855
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 152 (63.2 bits)