Os05g0535200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os05g0535200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.97 | 0.49 | 3.32 | -0.338 | 0.172 | -0.585 | 0.389 | 1.4 | 0.0855 | 14.9 | 56.99 | 1522 | -- | -- |
| 112.01 | 0.493 | 3.29 | -0.244 | 0.189 | -0.478 | 0.323 | -- | 0.0798 | 15 | 61 | 1302 | -- | -- |
| 109.48 | 0.487 | 3.32 | -0.33 | 0.175 | -0.579 | -- | 1.41 | 0.0852 | 15 | 57 | 1521 | -- | -- |
| 112.42 | 0.494 | 3.29 | -0.26 | 0.215 | -0.491 | -- | -- | 0.0813 | 14.6 | 61 | 1248 | -- | -- |
| 111.21 | 0.491 | 3.32 | -0.328 | -- | -0.569 | -- | 1.45 | 0.0864 | -- | 56 | 1521 | -- | -- |
| 120.06 | 0.514 | 3.32 | -0.18 | 0.15 | -- | 0.321 | -- | -0.0363 | 15.1 | -- | -- | -- | -- |
| 120.4 | 0.514 | 3.32 | -0.173 | 0.152 | -- | -- | -- | -0.0343 | 15.2 | -- | -- | -- | -- |
| 114.85 | 0.499 | 3.3 | -0.269 | -- | -0.438 | -- | -- | 0.0643 | -- | 59 | 1521 | -- | -- |
| 114.18 | 0.498 | 3.29 | -- | 0.221 | -0.458 | -- | -- | 0.104 | 14.6 | 61.07 | 1248 | -- | -- |
| 121.71 | 0.516 | 3.32 | -0.18 | -- | -- | -- | -- | -0.0383 | -- | -- | -- | -- | -- |
| 121.19 | 0.515 | 3.31 | -- | 0.156 | -- | -- | -- | -0.015 | 15.2 | -- | -- | -- | -- |
| 116.06 | 0.503 | 3.3 | -- | -- | -0.409 | -- | -- | 0.034 | -- | 61.69 | 1489 | -- | -- |
| 122.57 | 0.517 | 3.31 | -- | -- | -- | -- | -- | -0.0183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.42 | humidity | 60 | 270 | < th | dose independent | rect. | 17 | 18 |
| 2 | 105.24 | humidity | 70 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 3 | 105.39 | humidity | 60 | 270 | < th | dose independent | sin | 10 | NA |
| 6 | 106.23 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 9 | 106.43 | humidity | 70 | 270 | < th | dose dependent | sin | 10 | NA |
| 11 | 106.69 | humidity | 70 | 270 | < th | dose dependent | rect. | 17 | 18 |
| 13 | 106.73 | humidity | 80 | 1440 | < th | dose dependent | rect. | 19 | 15 |
| 15 | 106.74 | humidity | 60 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 17 | 106.85 | humidity | 60 | 270 | > th | dose independent | sin | 10 | NA |
| 18 | 106.92 | humidity | 60 | 720 | < th | dose independent | rect. | 8 | 3 |
| 33 | 106.96 | humidity | 60 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 39 | 107.02 | humidity | 60 | 4320 | > th | dose independent | rect. | 24 | 10 |
| 48 | 107.12 | humidity | 60 | 4320 | > th | dose independent | rect. | 20 | 14 |
| 50 | 107.15 | humidity | 60 | 4320 | < th | dose dependent | rect. | 18 | 16 |
| 55 | 107.32 | humidity | 60 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 92 | 107.63 | humidity | 60 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 128 | 108.01 | humidity | 60 | 720 | > th | dose independent | rect. | 3 | 8 |
| 160 | 108.15 | humidity | 60 | 30 | < th | dose dependent | sin | 9 | NA |
| 221 | 108.54 | radiation | 40 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 271 | 108.81 | humidity | 70 | 1440 | < th | dose dependent | rect. | 6 | 8 |
| 316 | 108.88 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 11 |
| 336 | 108.99 | humidity | 70 | 4320 | < th | dose dependent | rect. | 20 | 11 |
| 340 | 109.04 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 372 | 109.09 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 22 |
| 394 | 109.14 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 9 | 14 |
| 435 | 109.20 | atmosphere | 1010 | 270 | > th | dose dependent | rect. | 11 | 1 |
| 436 | 109.20 | humidity | 70 | 1440 | < th | dose dependent | rect. | 6 | 11 |
| 459 | 109.21 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 24 | 23 |
| 460 | 109.22 | atmosphere | 1010 | 30 | > th | dose dependent | sin | 0 | NA |
| 462 | 109.23 | atmosphere | 1010 | 30 | > th | dose dependent | rect. | 9 | 4 |
| 564 | 109.24 | radiation | 40 | 1440 | > th | dose dependent | sin | 12 | NA |
| 593 | 109.28 | atmosphere | 1010 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 936 | 109.34 | humidity | 70 | 1440 | < th | dose dependent | rect. | 13 | 23 |