BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0177400 Os05g0177400|Os05g0177400
(351 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0177400 Cyclin-like F-box domain containing protein 645 0.0
Os05g0175960 Cyclin-like F-box domain containing protein 367 e-102
Os05g0177000 Cyclin-like F-box domain containing protein 282 3e-76
Os07g0535200 Cyclin-like F-box domain containing protein 239 3e-63
Os07g0535100 Cyclin-like F-box domain containing protein 238 6e-63
Os07g0535300 Cyclin-like F-box domain containing protein 226 2e-59
Os05g0172500 Cyclin-like F-box domain containing protein 208 5e-54
Os05g0139200 Cyclin-like F-box domain containing protein 190 1e-48
Os07g0535700 Galactose oxidase, central domain containing p... 186 3e-47
Os05g0172100 Galactose oxidase, central domain containing p... 181 5e-46
Os05g0177100 Conserved hypothetical protein 134 7e-32
Os05g0172400 123 2e-28
Os05g0175920 115 7e-26
Os01g0380800 Cyclin-like F-box domain containing protein 113 3e-25
Os01g0379400 Cyclin-like F-box domain containing protein 105 4e-23
Os08g0529400 Cyclin-like F-box domain containing protein 101 9e-22
Os05g0139300 Cyclin-like F-box domain containing protein 92 4e-19
Os08g0529300 Cyclin-like F-box domain containing protein 86 3e-17
Os03g0668000 Cyclin-like F-box domain containing protein 76 5e-14
Os03g0664300 69 4e-12
Os01g0824700 Cyclin-like F-box domain containing protein 68 9e-12
Os07g0453200 65 6e-11
>Os05g0177400 Cyclin-like F-box domain containing protein
Length = 351
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/337 (94%), Positives = 319/337 (94%)
Query: 1 MAEGDSRDGRRGWIPPPAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHL 60
MAEGDSRDGRRGWIPPPAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHL
Sbjct: 1 MAEGDSRDGRRGWIPPPAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHL 60
Query: 61 LPRYHLGDAIVGFFYSDTFTNVTGEGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRL 120
LPRYHLGDAIVGFFYSDTFTNVTGEGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRL
Sbjct: 61 LPRYHLGDAIVGFFYSDTFTNVTGEGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRL 120
Query: 121 ADPRRFDYLVVNPATEQWVILPDSGWSDKVQTARLGFDPVVSSSHFHVFEFVEXXXXXXX 180
ADPRRFDYLVVNPATEQWVILPDSGWSDKVQTARLGFDPVVSSSHFHVFEFVE
Sbjct: 121 ADPRRFDYLVVNPATEQWVILPDSGWSDKVQTARLGFDPVVSSSHFHVFEFVEDGAGDAD 180
Query: 181 XXXXXXXXXXXHVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWNSVFFDGVLHLITLEYV 240
HVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWNSVFFDGVLHLITLEYV
Sbjct: 181 GNVDDDDDFDGHVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWNSVFFDGVLHLITLEYV 240
Query: 241 VAAVDVEGNAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLEDY 300
VAAVDVEGNAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLEDY
Sbjct: 241 VAAVDVEGNAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLEDY 300
Query: 301 SSEQWIWKHTVSHLHLFRTKRLLFVFPTTEAWAETVL 337
SSEQWIWKHTVSHLHLFRTKRLLFVFPTTEAWAETVL
Sbjct: 301 SSEQWIWKHTVSHLHLFRTKRLLFVFPTTEAWAETVL 337
>Os05g0175960 Cyclin-like F-box domain containing protein
Length = 381
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/326 (64%), Positives = 242/326 (74%), Gaps = 8/326 (2%)
Query: 1 MAEGDSRDGRRGWIPPPAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHL 60
MAE + R WIPP AEKLTDDLLVE+LSRVPYKSLCRSK V RRWRRVIS PDHR L
Sbjct: 1 MAE---EEDSRVWIPPAAEKLTDDLLVEVLSRVPYKSLCRSKRVCRRWRRVISDPDHRRL 57
Query: 61 LPRYHLGDAIVGFFYSDTFTNVTGEGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRL 120
LPRYHL DA+VGFF +F + +G GR FV PSLPFLP C L +LD CNGLLLCR RL
Sbjct: 58 LPRYHLHDAVVGFFDHRSFISFSGRGR-FVGPSLPFLPDCGDLRLLDICNGLLLCRRRRL 116
Query: 121 ADPRRFDYLVVNPATEQWVILPDSGWSDKVQTARLGFDPVVSSSHFHVFEFVEXXXXXXX 180
+DPRRFDYLV NPATEQW++LP+SGW+ K Q ARLGFDP VSSSHFHVFEF
Sbjct: 117 SDPRRFDYLVANPATEQWIVLPESGWTHKEQIARLGFDPAVSSSHFHVFEF----ELVEH 172
Query: 181 XXXXXXXXXXXHVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWNSVFFDGVLHLITLEYV 240
+V VEIYSS TG W H++NGW IR D W SVFF G+LHLIT++ V
Sbjct: 173 SAMGMSGDHDGNVVAVEIYSSETGVWIHRNNGWGCIIRTLDIWRSVFFKGMLHLITMDDV 232
Query: 241 VAAVDVEGNAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLEDY 300
VA VDVEGN+WRTIPMP++ V+P+ G+ +GFI +SQ L FVNTD D+ YK+SVWVLEDY
Sbjct: 233 VAVVDVEGNSWRTIPMPETFVDPYYGVDDGFIDVSQDCLCFVNTDRDDLYKLSVWVLEDY 292
Query: 301 SSEQWIWKHTVSHLHLFRTKRLLFVF 326
SS+QW KHTVSHLHLF T + F +
Sbjct: 293 SSDQWTLKHTVSHLHLFGTDKQHFGY 318
>Os05g0177000 Cyclin-like F-box domain containing protein
Length = 424
Score = 282 bits (721), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/324 (51%), Positives = 205/324 (63%), Gaps = 23/324 (7%)
Query: 18 AEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIVGFFYSD 77
AE+LTDDLLVEILSRVPYKSLCR KCVS RWRRVISHPDHR LPR+HL + GF Y+D
Sbjct: 35 AEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHL-QPLAGFLYAD 93
Query: 78 -----TFTNVTG-EGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCW-RLADPRRFDYLV 130
F V + P +DPS FLPKC+ L ++DSCNGLLLCRCW +L + R F+Y+V
Sbjct: 94 YRVLNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLLCRCWNQLNEHRTFNYVV 153
Query: 131 VNPATEQWVILPDSGWSDKVQTARLGFDPVVSSSHFHVFEFVEXXXXXXXXXXXXXXXXX 190
+P +++V+ PDS S KV+ LGFDP V SSHFHVFE VE
Sbjct: 154 CSPTAKKFVVFPDSTCSKKVRPF-LGFDPAV-SSHFHVFEVVEDWDYYDCDDDDLECDGV 211
Query: 191 XHVKGVEIYSSVTGEWSHK-DNGWDWEIRIRDEW----NSVFFDGVLHLITLEYVVAAVD 245
V G+ IYSS TG WS + DNGW IRIR + SVFF+G+LHL+ ++ VVA VD
Sbjct: 212 EDVVGLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHLVAIQPVVAVVD 271
Query: 246 VEGNAWRTIPMPQSLVEPFDGI-------GEGFIGLSQGSLYFVNTDHDEPYKVSVWVLE 298
VEG WRTIP+ P G EGFI LS+ L+F +TD +++SVWVL+
Sbjct: 272 VEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSYGDWEISVWVLD 331
Query: 299 DYSSEQWIWKHTVSHLHLF-RTKR 321
DY QW +HTVS + F RT R
Sbjct: 332 DYYGGQWTLQHTVSTMRPFERTMR 355
>Os07g0535200 Cyclin-like F-box domain containing protein
Length = 377
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 192/338 (56%), Gaps = 50/338 (14%)
Query: 9 GRRGWIPPPAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGD 68
GRR PA LTDDL+VEIL R+P +S+CR K V R WR +I+ +HR LP+
Sbjct: 7 GRRN----PAASLTDDLVVEILRRLPVRSVCRFKRVCRSWRNLIADREHRKKLPQ----- 57
Query: 69 AIVGFFYSDT-----------FTNVTGEGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRC 117
+ GFFY FTNV+G+G P + PS FLP+C+ + LD CNGLLLCRC
Sbjct: 58 TLSGFFYKSISGERCPCSAHHFTNVSGKGVPLIYPSFSFLPQCDTVVPLDCCNGLLLCRC 117
Query: 118 WRLA------DPRRFDYLVVNPATEQWVILPDSGWSD-KVQTARLGFDPVVSSSHFHVFE 170
++ + F Y V NPAT++WV+LPD+ W++ + + A L FDP +SS HFHV E
Sbjct: 118 FQPGPNNSDDEIEPFHYAVCNPATKEWVMLPDADWANGETRIACLCFDPAISS-HFHVLE 176
Query: 171 FVEXXXXXXXXXXXXXXXXXXHVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWN--SVFF 228
+VE V GVEIYSS TG W+ +GW ++ +R N SVF
Sbjct: 177 YVEAEYE--------------DVTGVEIYSSETGLWTLHVSGWGDDVFLRHWANPRSVFL 222
Query: 229 DGVLHLITLEYVVAAVDVEGNAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDE 288
+G LH T +A VD+EG WRTI MP+ + G I +QG L N D D+
Sbjct: 223 NGFLHSATCAAEIAVVDMEGKKWRTIAMPEPEGD------TGIIHQTQGRLCAFNVDPDD 276
Query: 289 PYKVSVWVLEDYSSEQWIWKHTVSHLHLFRTKRLLFVF 326
+K+S+W+LEDY ++ WI KHTVS L LF K+ F F
Sbjct: 277 IFKLSIWILEDYDTDNWILKHTVSSLRLFGGKKYQFGF 314
>Os07g0535100 Cyclin-like F-box domain containing protein
Length = 377
Score = 238 bits (606), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 192/338 (56%), Gaps = 50/338 (14%)
Query: 9 GRRGWIPPPAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGD 68
GRR PA LTDDL+VEIL R+P +S+CR K V R WR +I+ +HR LP+
Sbjct: 7 GRRN----PAASLTDDLVVEILRRLPVRSVCRFKRVCRSWRNLIADREHRKKLPQ----- 57
Query: 69 AIVGFFYSDT-----------FTNVTGEGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRC 117
+ GFFY + FTNV+G+G P + PS FLP+C+ + LD CNGLLLCRC
Sbjct: 58 TLSGFFYKSSSGERCPCSAHHFTNVSGKGVPLIYPSFSFLPQCDTVVPLDCCNGLLLCRC 117
Query: 118 WRLA------DPRRFDYLVVNPATEQWVILPDSGWSD-KVQTARLGFDPVVSSSHFHVFE 170
++ + F Y V NPAT++WV+LPD+ W++ + + A L FDP +SS HFHV E
Sbjct: 118 FQPGPNNSDDEIEPFHYAVCNPATKEWVMLPDADWANGETRIACLCFDPAISS-HFHVLE 176
Query: 171 FVEXXXXXXXXXXXXXXXXXXHVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWN--SVFF 228
+VE V GVEIYSS TG W+ +GW ++ +R N SVF
Sbjct: 177 YVEAEYE--------------DVTGVEIYSSETGLWTLHVSGWGDDVFLRHWANPRSVFL 222
Query: 229 DGVLHLITLEYVVAAVDVEGNAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDE 288
+G LH T +A VD+EG WRTI MP+ + G I +QG L N D D+
Sbjct: 223 NGFLHSATCAAEIAVVDMEGKKWRTIAMPEPEGD------TGIIHQTQGRLCAFNVDPDD 276
Query: 289 PYKVSVWVLEDYSSEQWIWKHTVSHLHLFRTKRLLFVF 326
+K+S+W+LEDY ++ WI KHTVS L LF + F F
Sbjct: 277 IFKLSIWILEDYDTDNWILKHTVSSLRLFGGMKYRFGF 314
>Os07g0535300 Cyclin-like F-box domain containing protein
Length = 437
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 178/318 (55%), Gaps = 39/318 (12%)
Query: 22 TDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIVGFFYSD---- 77
T DL+V+IL R+P +S+CRSK V WR +I+ DHR LP+ + GFFY+
Sbjct: 83 TIDLVVDILRRLPVRSVCRSKGVCPYWRDLIADHDHRKKLPQ-----TLSGFFYTSFSEE 137
Query: 78 ------TFTNVTGEGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRLADPRRFDYLVV 131
FTNVTG G P + P+ FLP+C+ + LDSCNGLLLCRC + +F Y V
Sbjct: 138 RSAAEHHFTNVTGIGMPLISPTFAFLPQCKEVIPLDSCNGLLLCRCLQFDGVSKFHYAVC 197
Query: 132 NPATEQWVILPDSGWSD-KVQTARLGFDPVVSSSHFHVFEFVEXXXXXXXXXXXXXXXXX 190
NPATE+WV+LPD+ W+D + + A L FDP + SSHFHV E+VE
Sbjct: 198 NPATEEWVMLPDANWADGENRIACLCFDPAI-SSHFHVVEYVEDEAEC------------ 244
Query: 191 XHVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWN--SVFFDGVLHLITLEYVVAAVDVEG 248
V GVEI SS TG WS NGW+ + + N SVF +G LH +T + AVD+EG
Sbjct: 245 --VTGVEINSSKTGLWSVHVNGWNGVVLVSLSVNRRSVFLNGFLHSVTPADEIVAVDMEG 302
Query: 249 NAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLEDYSSEQWIWK 308
WR IP+P + G I +QG L N D + +K+S+W LEDY + WI K
Sbjct: 303 KKWRKIPVPDRDNDI------GIIHQTQGCLSAFNVDLLDIFKLSIWFLEDYDTNNWILK 356
Query: 309 HTVSHLHLFRTKRLLFVF 326
HTVS L LF K F
Sbjct: 357 HTVSSLDLFEGKNYRLDF 374
>Os05g0172500 Cyclin-like F-box domain containing protein
Length = 382
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 193/322 (59%), Gaps = 50/322 (15%)
Query: 17 PAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIVGFFY- 75
PA +LTDDL+VEILSR+P KS+ R + V RRWRR+IS P HR LP+ + GFF+
Sbjct: 17 PAAELTDDLIVEILSRLPAKSVRRCRRVCRRWRRLISDPHHRKKLPQ-----TLAGFFHL 71
Query: 76 ----------SDTFTNVTGEG--RPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRLADP 123
+ F NV+G G P V PS FLP+ E ++++DSC GLLLC+C+ +D
Sbjct: 72 SVNESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGLLLCQCFESSDA 131
Query: 124 RRFDYLVVNPATEQWVILPDSGW--SDKVQTARLGFDPVVSSSHFHVFEFVEXXXXXXXX 181
F Y+V NP TE+W++LP+SG+ D+ ARLGFDP VSS FHVFEFV
Sbjct: 132 --FRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSS-QFHVFEFVPCD------ 182
Query: 182 XXXXXXXXXXHVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWNSVFFDGVLHLITLEYVV 241
V GV+IYSS T EW+++++ W + I D S F +G+LHL++ + +
Sbjct: 183 ----------DVTGVKIYSSETREWNYRESEWCTDTGISDICRSAFCNGMLHLVSYQRSI 232
Query: 242 AAVDVEGNAWRTIPMPQSLVEPFDGIGE------GFIGLSQGSLYFVNTDHDEPYKVSVW 295
+VDVEG WRT +P+ +G+ E G I S+G LY+++ + P +S+W
Sbjct: 233 VSVDVEGRTWRTTKVPK-----MEGVEEVRDWLPGSICQSEGKLYYLSQYNTVPISLSIW 287
Query: 296 VLEDYSSEQWIWKHTVSHLHLF 317
+LEDYS ++W KH+V++ L+
Sbjct: 288 LLEDYSKDEWTLKHSVTNELLY 309
>Os05g0139200 Cyclin-like F-box domain containing protein
Length = 399
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 173/317 (54%), Gaps = 31/317 (9%)
Query: 17 PAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLG--------- 67
PA LTDDL+VEILSR+P KS+CR KCVS RWRR+ISH DHR LP G
Sbjct: 21 PAADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLAGFISHYSVPL 80
Query: 68 -DAIVGFFYSDTFTNVTGEG---RPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRLADP 123
D IV + D+ + R DPSL FLP + D CNGLLLC C + +
Sbjct: 81 HDGIVLIPHFDSIDGGEEDEEEHRLVPDPSLSFLPGYRTIFPKDCCNGLLLCLCCKNSPR 140
Query: 124 RRFDYLVVNPATEQWVILPDSGWSDKVQTARLGFDPVVSSSHFHVFEFVEXXXXXXXXXX 183
DY+V NPAT++W+ILP+ +D V T RLGFDP + S +FHVF +E
Sbjct: 141 DESDYVVCNPATQRWIILPEIDRADPVSTVRLGFDPAL-SPYFHVFAILEHVDGC----- 194
Query: 184 XXXXXXXXHVKGVEIYSSVTGEWSHKDNGWDWEI--RIRDEWNSVFFDGVLHLITLEYVV 241
V GVEI+S TG WSH++NGW E + + S F DG+++ I+ +
Sbjct: 195 ---------VSGVEIFSLETGAWSHRENGWGDEDDHTVHPDAKSAFVDGMVNFISYNSAI 245
Query: 242 AAVDVEGNAWRTIPMPQSLV-EPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLEDY 300
AVD EG W+TIP + + E FIG SQG LY++N + +SVW L+DY
Sbjct: 246 IAVDTEGKKWKTIPFLEEMTCECISNGILAFIGQSQGHLYYINFRDWDSSILSVWTLDDY 305
Query: 301 SSEQWIWKHTVSHLHLF 317
S W +K+ +S LF
Sbjct: 306 CSCGWSFKYNISTSQLF 322
>Os07g0535700 Galactose oxidase, central domain containing protein
Length = 335
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/285 (42%), Positives = 156/285 (54%), Gaps = 30/285 (10%)
Query: 56 DHRHLLPRYHLGDAIVGFFYSDT-----------FTNVTGEGRPFVDPSLPFLPKCEFLN 104
DH H R L + GFFY FTN TG G P V P+ FLP+C +
Sbjct: 3 DHEH---RKKLPQTLSGFFYKSIDYERCPHMARHFTNATGRGMPLVCPTFSFLPQCHHVV 59
Query: 105 VLDSCNGLLLCRCWRLADPRRFDYLVVNPATEQWVILPDSGWS-DKVQTARLGFDPVVSS 163
+LDSCNGLLLCRC + +F Y V NPAT + V+LPD+ W+ D+ +TA L FDP + S
Sbjct: 60 ILDSCNGLLLCRCHVSRETLQFQYAVCNPATGECVMLPDANWAIDENRTACLCFDPAI-S 118
Query: 164 SHFHVFEFVEXXXXXXXXXXXXXXXXXXHVKGVEIYSSVTGEWSHKDNGWDWEIRIR--D 221
SHFHV E+VE V GV IYSS TG WS NGWD E+ +
Sbjct: 119 SHFHVLEYVEDEEYVEDEDEYDAL-----VTGVVIYSSKTGLWSLHVNGWDDEVMVSLPV 173
Query: 222 EWNSVFFDGVLHLITLEYVVAAVDVEGNAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYF 281
+ VF +G LH +T +V AVD+EG WR IPMP +P I G I +QG L
Sbjct: 174 DRTRVFLNGFLHSVTTCDIV-AVDMEGKKWRKIPMP----DPDGDI--GIIHQTQGRLCA 226
Query: 282 VNTDHDEPYKVSVWVLEDYSSEQWIWKHTVSHLHLFRTKRLLFVF 326
N D ++ ++S+W LEDY ++ WI KHTVS ++LF K+ F
Sbjct: 227 FNVDPNDILELSIWFLEDYDTDNWILKHTVSSINLFGRKKYQLDF 271
>Os05g0172100 Galactose oxidase, central domain containing protein
Length = 389
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 166/312 (53%), Gaps = 30/312 (9%)
Query: 17 PAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIVGFF-- 74
PA +LTDDL+V+ILSR+P + P P+ +
Sbjct: 18 PAAELTDDLIVDILSRLPASRSADASAYPGGGAASSPTPTTARSSPKPSPASSTAARTNH 77
Query: 75 ----YSDTFTNVTGEGRPFVDPSLPFLPK--CEFLNVLDSCNGLLLCRCWRLADPRRFDY 128
+ F NVTG GRP + P++ FLP+ E + ++D C GLLL RC+ +D F Y
Sbjct: 78 AAPKLARHFVNVTGRGRPLICPTISFLPRFDLEGMRMVDCCGGLLLFRCFMSSD--EFCY 135
Query: 129 LVVNPATEQWVILPDSGWSDKVQT-ARLGFDPVVSSSHFHVFEFVEXXXXXXXXXXXXXX 187
LV NP+TE+WV PDSG++ + Q LGFDP VSS HFHVFEFV
Sbjct: 136 LVCNPSTEEWVAFPDSGYNPEWQFFTHLGFDPAVSS-HFHVFEFV--------------M 180
Query: 188 XXXXHVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWNSVFFDGVLHLITLEYVVAAVDVE 247
V+GVEIYSS TG W+ ++ WD E + D FF+G+LHL+ + +VDVE
Sbjct: 181 GDCGFVEGVEIYSSETGLWNFMESEWDPETTVYDR-TRTFFNGMLHLVEEGIAILSVDVE 239
Query: 248 GNAWRTIPMPQSLVEPFD---GIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLEDYSSEQ 304
G W++I P+ +E + + FIG SQG L +++ P+ +S+WVLEDYS ++
Sbjct: 240 GEIWQSIGAPRPELENVEDMFALVSCFIGQSQGKLCYLSAYDTVPWNLSIWVLEDYSKDE 299
Query: 305 WIWKHTVSHLHL 316
W KH ++ L
Sbjct: 300 WTLKHKLTTEQL 311
>Os05g0177100 Conserved hypothetical protein
Length = 135
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/69 (92%), Positives = 68/69 (98%)
Query: 256 MPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLEDYSSEQWIWKHTVSHLH 315
MPQSLVEPF+GIGEGFI LSQGSLYFVN+DHD+PYKVSVWVLEDYSSEQWIWKHTVSHLH
Sbjct: 1 MPQSLVEPFNGIGEGFIVLSQGSLYFVNSDHDKPYKVSVWVLEDYSSEQWIWKHTVSHLH 60
Query: 316 LFRTKRLLF 324
LF+TKRLLF
Sbjct: 61 LFQTKRLLF 69
>Os05g0172400
Length = 282
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 88/144 (61%), Gaps = 24/144 (16%)
Query: 45 SRRWRRVISHPDHRHLLPRYHLGDAIVGFFY-----------SDTFTNVTGEGRPFVDPS 93
SRRWR +IS PDHR LP+ + GFFY + F NV+G GRP V PS
Sbjct: 33 SRRWRGLISDPDHRKKLPQ-----TLAGFFYHSENESRFPMEARHFVNVSGRGRPLVYPS 87
Query: 94 LPFLPKCEFLNVLDSCNGLLLCRCWRLADPRRFDYLVVNPATEQWVILPDS-----GWSD 148
FLP+ E + ++DSC GLLLCRC+ +D R Y+V NPATE+ V LP+S G +
Sbjct: 88 FSFLPRFESIRMVDSCGGLLLCRCFESSDASR--YVVCNPATEELVALPESSYDAEGGGE 145
Query: 149 KVQTARLGFDPVVSSSHFHVFEFV 172
+ ARLGFDP V SS FHVF+FV
Sbjct: 146 EEMCARLGFDPDV-SSQFHVFQFV 168
>Os05g0175920
Length = 93
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Query: 237 LEYVVAAVDVEGNAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEPYK-VSVW 295
+ YVVA VDVEGN+WRTIPMPQ+L +P + +GF+ LSQG LYFVNTD + Y +SVW
Sbjct: 1 MGYVVAVVDVEGNSWRTIPMPQTLDDPDCNVDDGFVDLSQGRLYFVNTDRYDLYNSLSVW 60
Query: 296 VLEDYSSEQWIWKHTVSHLHLFRTKRLLF 324
VL+DYSS+QW KHTVSHLHLF +R F
Sbjct: 61 VLQDYSSDQWTLKHTVSHLHLFGRRRKDF 89
>Os01g0380800 Cyclin-like F-box domain containing protein
Length = 391
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 141/315 (44%), Gaps = 33/315 (10%)
Query: 18 AEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIVGFFYSD 77
KL DDL +++LSR+PYKS CR+KC W S+P + LP+ + GF Y
Sbjct: 11 GNKLPDDLTLDVLSRLPYKSFCRAKCTCTGWLSFSSNPHYCDKLPK-----PLTGFLYQK 65
Query: 78 T------FTNVTGEGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWR-LADPRRFDYLV 130
+ ++ + R F D SL FLP+ E+L + DSCNGL+LC+ R + P +++V
Sbjct: 66 SDSSAIEVASLCPDDRSF-DTSLSFLPRYEWLELTDSCNGLVLCKYGRNTSSPSVANFVV 124
Query: 131 VNPATEQWVILPDSGWSDKVQT--ARLGFDPVVSSSHFHVFEFVEXXXXXXXXXXXXXXX 188
NPAT QW+ LP++ + + +L FDP S +F+VF F E
Sbjct: 125 CNPATRQWMELPETLLEPEGHSYATKLAFDPSW-SPYFYVFNFEEKRNPVERWAC----- 178
Query: 189 XXXHVKGVEIYSSVTGEWSHKDNGWDWEIRIR-DEWNSVFFDGVLHLITLEYVVAAVDVE 247
+ V I+SS W D+ W+ +I D V G L L T V +D
Sbjct: 179 ----ISKVAIFSSRNSTW-FMDDKWEPSNQISVDCQPHVLLGGKLFLQTSSCRVLVIDAF 233
Query: 248 GNAWR----TIPMP-QSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLEDYSS 302
N + +P P G++G G L++V D + VW + Y
Sbjct: 234 HNTEQPSHWIFDLPGYKPTSPMVDCLTGYLGHKSGVLHYVQPDTGG-RTLLVWARDGYPH 292
Query: 303 EQWIWKHTVSHLHLF 317
W KH +S F
Sbjct: 293 GDWNLKHRLSMSDAF 307
>Os01g0379400 Cyclin-like F-box domain containing protein
Length = 433
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 154/329 (46%), Gaps = 39/329 (11%)
Query: 21 LTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIVGFFYSDTFT 80
LTDDL+V+ILSR+P KS+C KCV + W + S LPR G Y D+
Sbjct: 63 LTDDLVVDILSRLPLKSVCCFKCVCKSWASLFSDQYFCTKLPR-----RPAGLLYQDSNN 117
Query: 81 NVTG-----EGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRLAD-PRRFDYLVVNPA 134
+ G + SL F+P E L ++D NGL+L +D P ++V NPA
Sbjct: 118 SSIQIAKLPSGNSEIGTSLSFMPHHENLKLVDCSNGLILFTHGSKSDSPDSSHFIVCNPA 177
Query: 135 TEQWVILPDS----GWSDKVQTARLGFDPVVSSSHFHVFEFVEXXXXXXXXXXXXXXXXX 190
T++W+ LPD+ SD + A L F+P SS HF VF F +
Sbjct: 178 TQEWIALPDTCPRVNGSDYI--AMLAFNP-SSSCHFFVFNFQKRRSPHSGVFV------- 227
Query: 191 XHVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWNSVFFDGVLHLITLEYVVAAVDVEG-- 248
+ VEI+SS W D+ ++ EI + V GVL+L T+E+ V A++
Sbjct: 228 --ITEVEIFSSEDFTWI-ADDAFETEIMMI-SMPHVLLHGVLYLRTVEHSVFAIETPHMY 283
Query: 249 ----NAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLEDYSSEQ 304
+ W T +P P + G +G S G L+++ ++D + ++VW LE +Q
Sbjct: 284 KPWIHRW-TFELPGDSC-PMNNYIWGCLGESSGILHYMQPNYDGCW-LNVWRLES-RHQQ 339
Query: 305 WIWKHTVSHLHLFRTKRLLFVFPTTEAWA 333
W H++S + F L+ P + W+
Sbjct: 340 WSMTHSLSMIDAFGRGTLVHGDPFSVDWS 368
>Os08g0529400 Cyclin-like F-box domain containing protein
Length = 369
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 132/305 (43%), Gaps = 39/305 (12%)
Query: 20 KLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIVGFFYSDT- 78
+ DDLLVEILSR+P+KSL R KCVSR WR +IS D R LP G + +
Sbjct: 2 EFCDDLLVEILSRLPFKSLARFKCVSRSWRALISGGDLRRRLPLLAAGLFVGDGGGGEPR 61
Query: 79 -FTNVTGEGRPFVDPSLPFLPKCE-FLNVLDSCNGLLLCRCWRLADPRRFDYLVVNPATE 136
T +G+G F D + F P E V+D+C GLLL R A V PAT
Sbjct: 62 YATACSGDGVEFCD--MSFFPLAETAARVVDACEGLLLYRSLAAASA----MYVACPATR 115
Query: 137 QWVILPDSGWSDKVQTARLGFDPV---VSSSHFHVFEFVEXXXXXXXXXXXXXXXXXXHV 193
+W LP + Q L FDP S +HV FV
Sbjct: 116 RWAALPVP--RREAQLPLLAFDPADGGGGSPRYHVVCFVAWQERGAT------------- 160
Query: 194 KGVEIYSSVTGEWSHKDNGWDWEIRIRDEWNSVFFDGVLHLITLEYVVAAVDVEGNAWRT 253
V+++SS TG W+ +D + + + GVLH++ V +D+ T
Sbjct: 161 --VDVFSSETGAWAERDAAFGGVEASSLSPTTHYRGGVLHVLAYPDRVVLMDLAATTTTT 218
Query: 254 IPMPQSLVEPF--DGIGEGF-IGLSQGSLYFVNTDHDEPYKVSVWVLE----DYSSEQWI 306
+ + P D + G +G S+G L++ D + ++ VW L+ S QWI
Sbjct: 219 TSVAPGRLAPRLPDDVDAGARLGHSRGRLHYAKCDGE---RLRVWALDVDAASPGSCQWI 275
Query: 307 WKHTV 311
+TV
Sbjct: 276 LTNTV 280
>Os05g0139300 Cyclin-like F-box domain containing protein
Length = 309
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 107/209 (51%), Gaps = 33/209 (15%)
Query: 10 RRGWIPPPAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLG-- 67
RRG I + L D ILSR+P KS+CR KCVS RWRR+ISH DHR LP G
Sbjct: 12 RRGGIDDLPDDLIVD----ILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLPHTLSGFI 67
Query: 68 ---------DAIVGFFYSDTFTNVTGEG---RPFVDPSLPFLPKCEFLNVLDSCNGLLLC 115
D +V + D+ + R DPSL FL ++ D CNGLLLC
Sbjct: 68 SRYYGPLNDDELVSIPHFDSIDGGEEDEEEHRLVPDPSLSFLLGYMSISPKDCCNGLLLC 127
Query: 116 RCWRLADPRRFDYLVVNPATEQWVILPDSGWSDKVQTARLGFDPVVSSSHFHVFEFVEXX 175
C + + DY+V NPAT++W+ILP+ D++ + RL FDP + S +FHVF +E
Sbjct: 128 LCCKNSPRDESDYVVCNPATQRWIILPEIDDYDQLASIRLCFDPAL-SPYFHVFAILEDA 186
Query: 176 XXXXXXXXXXXXXXXXHVKGVEIYSSVTG 204
+ GVEI+SS TG
Sbjct: 187 DGC--------------ITGVEIFSSETG 201
>Os08g0529300 Cyclin-like F-box domain containing protein
Length = 371
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 135/325 (41%), Gaps = 45/325 (13%)
Query: 21 LTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLP------RYHLGDAIVGFF 74
+ DDLL EI+ R+P+KS+ RS CVS+ WR +S R LP + DA+
Sbjct: 16 IGDDLLSEIIVRLPFKSVARSACVSKDWRAAVSDDYLRRRLPLLMTTVYFPDDDAVAAGG 75
Query: 75 YSDTFTNVT------GEGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRLADPRRFDY 128
+G D L FLP+ + V D CNGLLLCR P ++
Sbjct: 76 GGGGGPRFACAASDGNDGHRLEDCHLGFLPERGGVVVCDGCNGLLLCR-----SPGTPEF 130
Query: 129 LVVNPATEQWVILPDSGWSDKVQTARLGFDPVVSSSHFHVFEFVEXXXXXXXXXXXXXXX 188
VV+P T +W LP + + L FDP +S + V F
Sbjct: 131 FVVDPVTRRWAALPAPAKAATLSV--LAFDP-STSPDYRVVNFTGWRDRG---------- 177
Query: 189 XXXHVKGVEIYSSVTGEWSHKDNGWDWEIRIRDEWNSVFFDGVLHLITLEYVVAAVDVEG 248
VE++SS T W+ +D + + + DG+L+++ E V +
Sbjct: 178 -----AAVEVFSSATWAWTARDTEFGGVPASSLSGSMHYHDGILYILASE-PDCLVSLNL 231
Query: 249 NAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVLEDYSSEQWIWK 308
+ + L EP DG G+ + S G L+++ D + + VW L+D +QW K
Sbjct: 232 ADFSSTAAVIDLPEPVDG-GDAHVAHSGGRLHYIFRDGE---LLKVWELDD--DDQWRPK 285
Query: 309 HTVSHLHLFRTK---RLLFVFPTTE 330
H V HL R L + P E
Sbjct: 286 HAVKVEHLAHGGGEVRFLAMHPEEE 310
>Os03g0668000 Cyclin-like F-box domain containing protein
Length = 452
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 136/339 (40%), Gaps = 61/339 (17%)
Query: 21 LTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIVGFF------ 74
L DD+L E+L R+ +SL +CV + WR ++ D R LL L ++ G F
Sbjct: 6 LPDDVLAEVLRRLAPRSLAACRCVCKPWRDLV---DDRRLLRADLLPRSLAGIFVNFHCL 62
Query: 75 YSDTFTNVTGEGRPFVDPSLPFL-PKCEF-----LNVLDSCNGLLLCRCWRLADPRRFDY 128
YS F + + FL PK E+ V CNGLLL RF
Sbjct: 63 YSSEFFARPPAAAAAISGNFDFLPPKDEYDQYRHHQVEGHCNGLLLI---------RFRD 113
Query: 129 LVVNPATEQWVILPDSGWS----DKVQTARLGFDPVVSSSHFHV-----FEFVEXXXXXX 179
LVVNPAT W LP D++ A L FDP VS H+ V F +
Sbjct: 114 LVVNPATRWWDRLPPRPLPRDEMDRIDAAYLVFDPAVSPRHYEVFLTPSFRWKSESEKAE 173
Query: 180 XXXXXXXXXXXXHVKGVEIYSSVTGEWSHK-------------DNGWDWEIRIRDEWNSV 226
+ ++SS TG W + D DW D+ N V
Sbjct: 174 LDPMVEASEWPPESYTLPVFSSRTGLWQERSFIRQGQAAGTIADMRSDW---ASDQRNGV 230
Query: 227 FFDGVLHLITLEYVVAAVDVEGNAWRTIPMPQSLVEPFDGIGEGF-IGLSQGSLYFVNTD 285
++ G L++ V + + + ++ I P+ + G F +G S+ +Y +
Sbjct: 231 YWRGALYVHCQTNFVIRISLNDDKYQVIKPPE-----YSGRYLNFYLGRSEKGVYLALSR 285
Query: 286 HDEPYKVSVWVLEDYSSE-QWIWKHT--VSHLHLFRTKR 321
+ + VW+L++ S+ +W KH + H+ L R R
Sbjct: 286 DN---CLKVWILDETCSKMKWELKHDKHIRHILLGRNNR 321
>Os03g0664300
Length = 468
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 128/313 (40%), Gaps = 47/313 (15%)
Query: 21 LTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIVGFF------ 74
L DD+L ++L R+P +SL ++CV WR I D R LL L ++ G F
Sbjct: 15 LPDDVLADVLGRLPPRSLAAARCVCAAWRATI---DDRRLLRTDLLPLSLAGIFIHFDDL 71
Query: 75 -YSDTFTNVTGEGRPFVDPSLPFLP-KCEFLNVLDSCNGLLLCRCWRLADPRRFDYLVVN 132
+ + F+ + P + L ++P K V D CNGLLL VVN
Sbjct: 72 RFPEFFSRPSTPTTPAISGKLDYMPNKYALYAVNDHCNGLLLLYTH-----------VVN 120
Query: 133 PATEQWVILP-----DSGWSDKVQTARLGFDPVVSSSHFHVFEFVEXXXXXXXXXXXXXX 187
PAT + V LP +SD + FDP V S H+ V
Sbjct: 121 PATRRCVTLPLLPPSRGTFSDNY----IVFDPTV-SPHYEVIRISYLMCNMRLDPIIRES 175
Query: 188 XXXXHVKGVEIYSSVTGEWSHK----------DNGWDWEIRIRDEWNSVFFDGVLHLITL 237
+ ++SS T +W + G ++ R + + ++ G L++
Sbjct: 176 EWPPSPFLLNVFSSATKQWEDRLFVREGEAAGTIGDLVKLYSRQHY-AAYWHGALYVHRC 234
Query: 238 EYVVAAVDVEGNAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEPYKVSVWVL 297
YV +G ++ I PQ + + ++G S+ +Y + + + ++SVW+L
Sbjct: 235 NYVTRLSLTDGK-YKVIKNPQDI--DMSKCLKFYLGKSENGVYLASLEQELDLQLSVWIL 291
Query: 298 -EDYSSEQWIWKH 309
E + +W+ KH
Sbjct: 292 NESCAKAKWVLKH 304
>Os01g0824700 Cyclin-like F-box domain containing protein
Length = 348
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 143/331 (43%), Gaps = 48/331 (14%)
Query: 18 AEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVI-SHPDHRHLLPRYHLGDAIVGFF-- 74
A+ L DD+L IL + L S+CV + W +I +H R L + +G + F
Sbjct: 9 AKLLPDDVLTIILRCLAPHDLAMSRCVCKLWCTIIDTHRMLRVDLLPHSVGGIFINFHDL 68
Query: 75 -YSDTFTN-VTGEGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCWRLADPRRFDYLVVN 132
S+ F TG P + ++ +LP V CNGLLL ++ P + VVN
Sbjct: 69 GLSEFFARPSTG---PTISGNINYLPLTSI--VRGHCNGLLLLYS-HISRPGMKQFYVVN 122
Query: 133 PATEQWVILPDSGWSD----KVQTARLGFDPVVSSSHFHVFEFVEXXXXXXXXXXXXXXX 188
PAT QWV LP D + L FDP + SSHF VF+
Sbjct: 123 PATRQWVQLPPPPRPDIGIMHLDNLYLAFDPTL-SSHFEVFQI------PYVDVFRHRSE 175
Query: 189 XXXHVKGVE---------IYSSVTGEWSHKDNGWDWEIR-----IRDEW-----NSVFFD 229
++G+E ++S+ T +W + + E IR ++ N+V+
Sbjct: 176 LNPAIEGIEWPPSTCVLHVFSTRTRQWEERSFVREGEAAGSLAIIRRDFPNFLHNAVYCR 235
Query: 230 GVLHLITLEYVVAAVDVEGNAWRTIPMPQSLVEPFDGIGEGFIGLSQGSLYFVNTDHDEP 289
GVL++ V + + +R I P +E ++ ++GLSQ +Y T D+P
Sbjct: 236 GVLYVRCQTNFVMRISLSDGKYRIIKPPVE-IERYEE-SNIYMGLSQKRVYC--TFFDDP 291
Query: 290 YKVSVWVLEDYSSEQWIWKHTVSHL--HLFR 318
+ + + E Y +W+ K+ +S L H F+
Sbjct: 292 DIIYI-LDESYGKMEWVQKNAISCLVIHAFQ 321
>Os07g0453200
Length = 281
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 12 GWIPPPAEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIV 71
G I + T+D+LV IL R+ + L S+CV + WR +I D R LL R L +V
Sbjct: 20 GIIGGHGKPATEDVLVNILHRLAPRCLAISRCVCKPWRTII---DARCLL-RVDLLPHLV 75
Query: 72 GFFYSDTFTNVTGE--GRPFVDPSLP----FLPKCEFLNVLDSCNGLLLCRCWRLAD-PR 124
G + + + E RP + P++ +LP V D CNGLLL + AD P
Sbjct: 76 GGIFINFHDLILSEFISRPSIGPTISGNFNYLPHNSI--VRDHCNGLLLLDGY--ADYPA 131
Query: 125 RFDYLVVNPATEQWVILPDSGWSD----KVQTARLGFDPVVSSS 164
Y VVNPAT QWV LP S T L FDP +SS
Sbjct: 132 TRQYYVVNPATRQWVQLPPCPSSHPGMYSESTEYLVFDPGLSSQ 175
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.140 0.471
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,249,445
Number of extensions: 576042
Number of successful extensions: 1727
Number of sequences better than 1.0e-10: 22
Number of HSP's gapped: 1666
Number of HSP's successfully gapped: 22
Length of query: 351
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 249
Effective length of database: 11,709,973
Effective search space: 2915783277
Effective search space used: 2915783277
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 156 (64.7 bits)