Os07g0535200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0535200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.33 | 0.313 | 8.84 | 1.29 | 0.557 | -0.478 | 0.0831 | -0.499 | 0.641 | 23.3 | 68.98 | 1237 | -- | -- |
| 44.82 | 0.312 | 8.84 | 1.33 | 0.552 | -0.508 | 0.025 | -- | 0.63 | 23.2 | 67.89 | 1241 | -- | -- |
| 44.36 | 0.31 | 8.84 | 1.29 | 0.556 | -0.478 | -- | -0.472 | 0.642 | 23.3 | 68.98 | 1236 | -- | -- |
| 44.81 | 0.312 | 8.84 | 1.33 | 0.556 | -0.509 | -- | -- | 0.631 | 23.3 | 68 | 1241 | -- | -- |
| 58.47 | 0.356 | 8.81 | 1.29 | -- | -0.497 | -- | -0.276 | 0.713 | -- | 71.15 | 1566 | -- | -- |
| 54.26 | 0.345 | 8.83 | 1.23 | 0.454 | -- | -0.0832 | -- | 0.652 | 22.9 | -- | -- | -- | -- |
| 54.29 | 0.345 | 8.83 | 1.24 | 0.455 | -- | -- | -- | 0.653 | 22.9 | -- | -- | -- | -- |
| 58.59 | 0.357 | 8.81 | 1.34 | -- | -0.517 | -- | -- | 0.723 | -- | 71 | 1573 | -- | -- |
| 67.02 | 0.381 | 8.82 | -- | 0.388 | -0.711 | -- | -- | 0.591 | 0.128 | 63.46 | 29978 | -- | -- |
| 67.12 | 0.383 | 8.82 | 1.25 | -- | -- | -- | -- | 0.656 | -- | -- | -- | -- | -- |
| 94.67 | 0.455 | 8.86 | -- | 0.465 | -- | -- | -- | 0.515 | 23 | -- | -- | -- | -- |
| 74.34 | 0.402 | 8.87 | -- | -- | -1.12 | -- | -- | 0.453 | -- | 63.66 | 47520 | -- | -- |
| 108.16 | 0.485 | 8.85 | -- | -- | -- | -- | -- | 0.517 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.26 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 4 | 42.61 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 5 | 42.66 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 8 | 42.83 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 10 | 42.94 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 17 | 43.01 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 18 | 43.02 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 19 | 43.04 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 23 | 43.09 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 25 | 43.12 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 27 | 43.13 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 35 | 43.19 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 38 | 43.22 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 40 | 43.26 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 44 | 43.27 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 49 | 43.29 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 62 | 43.35 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 8 |
| 67 | 43.37 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 72 | 43.38 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 14 |
| 79 | 43.41 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 91 | 43.45 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 96 | 43.45 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |
| 112 | 43.50 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 9 |
| 145 | 43.59 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 167 | 43.62 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 220 | 43.74 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 222 | 43.74 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 11 |
| 231 | 43.77 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 253 | 43.79 | wind | 5.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 296 | 43.87 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 340 | 43.92 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 354 | 43.95 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 356 | 43.96 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 480 | 44.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 481 | 44.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 529 | 44.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 532 | 44.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 537 | 44.23 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 15 |
| 540 | 44.24 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 544 | 44.24 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 658 | 44.40 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 662 | 44.40 | wind | 1.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 669 | 44.41 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 7 | 4 |
| 682 | 44.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 729 | 44.49 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 778 | 44.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 786 | 44.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 790 | 44.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 807 | 44.59 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 852 | 44.63 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 955 | 44.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 983 | 44.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 984 | 44.77 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |