Os05g0177000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0177000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.09 | 0.523 | 6.07 | 0.857 | 0.865 | -1.84 | 0.0726 | -2.71 | 0.107 | 7.96 | 31.23 | 26 | -- | -- |
| 132.25 | 0.54 | 6.11 | 0.438 | 0.827 | -2.07 | 0.312 | -- | 0.0199 | 8.09 | 34.27 | 29 | -- | -- |
| 124.11 | 0.519 | 6.07 | 0.863 | 0.864 | -1.84 | -- | -2.73 | 0.108 | 7.98 | 31.22 | 25 | -- | -- |
| 132.48 | 0.536 | 6.11 | 0.436 | 0.848 | -2.12 | -- | -- | 0.0151 | 8.07 | 40.75 | 17 | -- | -- |
| 161.08 | 0.594 | 6.1 | 0.86 | -- | -1.81 | -- | -2.51 | 0.0696 | -- | 28.48 | 2 | -- | -- |
| 174.73 | 0.62 | 6.05 | 0.839 | 0.995 | -- | 0.361 | -- | 0.315 | 10.6 | -- | -- | -- | -- |
| 175.27 | 0.62 | 6.04 | 0.854 | 0.994 | -- | -- | -- | 0.316 | 10.5 | -- | -- | -- | -- |
| 169.79 | 0.607 | 6.14 | 0.447 | -- | -2.14 | -- | -- | 0.0249 | -- | 73.05 | 2 | -- | -- |
| 136.98 | 0.545 | 6.13 | -- | 0.854 | -2.34 | -- | -- | -0.0579 | 7.73 | 34.8 | 13 | -- | -- |
| 235.94 | 0.718 | 6.07 | 0.836 | -- | -- | -- | -- | 0.312 | -- | -- | -- | -- | -- |
| 194.48 | 0.652 | 6.07 | -- | 0.988 | -- | -- | -- | 0.221 | 10.5 | -- | -- | -- | -- |
| 174.76 | 0.616 | 6.15 | -- | -- | -2.28 | -- | -- | -0.0406 | -- | 81.22 | 2 | -- | -- |
| 254.38 | 0.744 | 6.09 | -- | -- | -- | -- | -- | 0.219 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.83 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 120.99 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 3 | 121.51 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 4 | 121.90 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 5 | 121.99 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 7 | 122.18 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 8 | 122.23 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 10 | 122.58 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 11 | 122.71 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 15 | 122.80 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 18 | 123.14 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 12 |
| 19 | 123.15 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 22 | 123.16 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 2 | 8 |
| 42 | 123.51 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 46 | 123.59 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 49 | 123.61 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 50 | 123.62 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 3 |
| 52 | 123.64 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 56 | 123.70 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 60 | 123.75 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 66 | 123.84 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 16 |
| 86 | 124.00 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 89 | 124.05 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 131 | 124.32 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 147 | 124.44 | temperature | 30.0 | 30 | < th | dose dependent | no | NA | NA |
| 152 | 124.48 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 166 | 124.56 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 169 | 124.57 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 171 | 124.58 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 172 | 124.61 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 187 | 124.72 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 234 | 125.03 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 236 | 125.05 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 239 | 125.06 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 254 | 125.16 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 279 | 125.33 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 292 | 125.41 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 22 |
| 305 | 125.47 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 18 |
| 332 | 125.50 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 333 | 125.50 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 3 | 18 |
| 339 | 125.51 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 14 |
| 354 | 125.52 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 416 | 125.66 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 458 | 125.77 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 485 | 125.89 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 494 | 125.91 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 528 | 126.03 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 533 | 126.04 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 541 | 126.06 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 544 | 126.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 19 |
| 560 | 126.13 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 567 | 126.16 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 588 | 126.21 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 590 | 126.22 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 596 | 126.23 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 604 | 126.26 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 607 | 126.29 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 679 | 126.49 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 12 |
| 688 | 126.50 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 875 | 126.85 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 10 | 12 |
| 879 | 126.85 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 897 | 126.90 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 911 | 126.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 938 | 126.95 | temperature | 30.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 989 | 127.05 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 19 | NA |