BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0177000 Os05g0177000|AK064399
(424 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0177000 Cyclin-like F-box domain containing protein 756 0.0
Os05g0177400 Cyclin-like F-box domain containing protein 258 4e-69
Os05g0175960 Cyclin-like F-box domain containing protein 233 3e-61
Os07g0535100 Cyclin-like F-box domain containing protein 213 3e-55
Os07g0535200 Cyclin-like F-box domain containing protein 212 5e-55
Os07g0535300 Cyclin-like F-box domain containing protein 181 6e-46
Os05g0172500 Cyclin-like F-box domain containing protein 173 3e-43
Os05g0139200 Cyclin-like F-box domain containing protein 170 2e-42
Os07g0535700 Galactose oxidase, central domain containing p... 163 2e-40
Os05g0172100 Galactose oxidase, central domain containing p... 135 6e-32
Os01g0380800 Cyclin-like F-box domain containing protein 109 4e-24
Os05g0172400 103 3e-22
Os01g0379400 Cyclin-like F-box domain containing protein 98 1e-20
Os05g0139300 Cyclin-like F-box domain containing protein 91 2e-18
Os08g0529400 Cyclin-like F-box domain containing protein 79 6e-15
Os05g0177100 Conserved hypothetical protein 78 1e-14
>Os05g0177000 Cyclin-like F-box domain containing protein
Length = 424
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/408 (90%), Positives = 370/408 (90%)
Query: 17 PKPQALAAAVSNGTTSAIAEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRR 76
PKPQALAAAVSNGTTSAIAEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRR
Sbjct: 17 PKPQALAAAVSNGTTSAIAEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRR 76
Query: 77 QLPRHHLQPLAGFLYADYRVLNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLL 136
QLPRHHLQPLAGFLYADYRVLNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLL
Sbjct: 77 QLPRHHLQPLAGFLYADYRVLNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLL 136
Query: 137 CRCWNQLNEHRTFNYVVCSPTAKKFVVFPDSTCSKKVRPFLGFDPAVSSHFHVFXXXXXX 196
CRCWNQLNEHRTFNYVVCSPTAKKFVVFPDSTCSKKVRPFLGFDPAVSSHFHVF
Sbjct: 137 CRCWNQLNEHRTFNYVVCSPTAKKFVVFPDSTCSKKVRPFLGFDPAVSSHFHVFEVVEDW 196
Query: 197 XXXXXXXXXXXXXXXXXXXXLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNG 256
LRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNG
Sbjct: 197 DYYDCDDDDLECDGVEDVVGLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNG 256
Query: 257 MLHLXXXXXXXXXXXXEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFAS 316
MLHL EGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFAS
Sbjct: 257 MLHLVAIQPVVAVVDVEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFAS 316
Query: 317 TDSYGDWEISVWVLDDYYGGQWTLQHTVSTMRPFERTMRRRMNPDDCTLVWIEGRKMFFM 376
TDSYGDWEISVWVLDDYYGGQWTLQHTVSTMRPFERTMRRRMNPDDCTLVWIEGRKMFFM
Sbjct: 317 TDSYGDWEISVWVLDDYYGGQWTLQHTVSTMRPFERTMRRRMNPDDCTLVWIEGRKMFFM 376
Query: 377 FYDYVHCILTSYEMDSGEVRCLSRPRSYCEPPYLPYIPLFLESLADGP 424
FYDYVHCILTSYEMDSGEVRCLSRPRSYCEPPYLPYIPLFLESLADGP
Sbjct: 377 FYDYVHCILTSYEMDSGEVRCLSRPRSYCEPPYLPYIPLFLESLADGP 424
>Os05g0177400 Cyclin-like F-box domain containing protein
Length = 351
Score = 258 bits (660), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/324 (48%), Positives = 191/324 (58%), Gaps = 23/324 (7%)
Query: 35 AEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHL-QPLAGFLYAD 93
AE+LTDDLLVEILSRVPYKSLCR KCVS RWRRVISHPDHR LPR+HL + GF Y+D
Sbjct: 18 AEKLTDDLLVEILSRVPYKSLCRSKCVSRRWRRVISHPDHRHLLPRYHLGDAIVGFFYSD 77
Query: 94 YRVLNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLLCRCWNQLNEHRTFNYVV 153
F V + P +DPS FLPKC+ L ++DSCNGLLLCRCW +L + R F+Y+V
Sbjct: 78 -----TFTNVTG-EGRPFVDPSLPFLPKCEFLNVLDSCNGLLLCRCW-RLADPRRFDYLV 130
Query: 154 CSPTAKKFVVFPDSTCSKKVRPF-LGFDPAV-SSHFHVFXXXXXXXXXXXXXXXXXXXXX 211
+P +++V+ PDS S KV+ LGFDP V SSHFHVF
Sbjct: 131 VNPATEQWVILPDSGWSDKVQTARLGFDPVVSSSHFHVFEFVEDGAGDADGNVDDDDDFD 190
Query: 212 XXXXXLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHLXXXXXXXXXXX 271
+ IYSS TG WS + DNGW IRIR + SVFF+G+LHL
Sbjct: 191 GHVKGVEIYSSVTGEWSHK-DNGWDWEIRIRDEW----NSVFFDGVLHLITLEYVVAAVD 245
Query: 272 XEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSYGDWEISVWVLD 331
EG WRTIP+ P G EGFI LS+ L+F +TD +++SVWVL+
Sbjct: 246 VEGNAWRTIPMPQSLVEPFDGI-------GEGFIGLSQGSLYFVNTDHDEPYKVSVWVLE 298
Query: 332 DYYGGQWTLQHTVSTMRPFERTMR 355
DY QW +HTVS + F RT R
Sbjct: 299 DYSSEQWIWKHTVSHLHLF-RTKR 321
>Os05g0175960 Cyclin-like F-box domain containing protein
Length = 381
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 213/391 (54%), Gaps = 29/391 (7%)
Query: 35 AEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQ-PLAGFLYAD 93
AE+LTDDLLVE+LSRVPYKSLCR K V RWRRVIS PDHRR LPR+HL + GF D
Sbjct: 15 AEKLTDDLLVEVLSRVPYKSLCRSKRVCRRWRRVISDPDHRRLLPRYHLHDAVVGFF--D 72
Query: 94 YRVLNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLLCRCWNQLNEHRTFNYVV 153
+R F + PS FLP C DL+L+D CNGLLLCR +L++ R F+Y+V
Sbjct: 73 HRSFISFS-----GRGRFVGPSLPFLPDCGDLRLLDICNGLLLCRR-RRLSDPRRFDYLV 126
Query: 154 CSPTAKKFVVFPDSTCSKKVR-PFLGFDPAV-SSHFHVFXXXXXXXXXXXXXXXXXXXXX 211
+P ++++V P+S + K + LGFDPAV SSHFHVF
Sbjct: 127 ANPATEQWIVLPESGWTHKEQIARLGFDPAVSSSHFHVF----EFELVEHSAMGMSGDHD 182
Query: 212 XXXXXLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHLXXXXXXXXXXX 271
+ IYSSETGVW +NGW IR +SVFF GMLHL
Sbjct: 183 GNVVAVEIYSSETGVWIHR-NNGWGCIIRTLDIW----RSVFFKGMLHLITMDDVVAVVD 237
Query: 272 XEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSYGDWEISVWVLD 331
EG +WRTIP+ P G +GFI +S+D L F +TD +++SVWVL+
Sbjct: 238 VEGNSWRTIPMPETFVDPYYGV-------DDGFIDVSQDCLCFVNTDRDDLYKLSVWVLE 290
Query: 332 DYYGGQWTLQHTVSTMRPFERTMRRRMNPDDCTLVWIEGRKMFFMFYDYVHCILTSYEMD 391
DY QWTL+HTVS + F T ++ DD +V I ++ I SYEMD
Sbjct: 291 DYSSDQWTLKHTVSHLHLFG-TDKQHFGYDD-KVVSIHPKRNIIFLVSLNDGIFISYEMD 348
Query: 392 SGEVRCLSRPRSYCEPPYLPYIPLFLESLAD 422
S EV + YLPY+PL+ ESLA+
Sbjct: 349 SREVHYICELGDILTRHYLPYVPLYSESLAN 379
>Os07g0535100 Cyclin-like F-box domain containing protein
Length = 377
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 199/402 (49%), Gaps = 50/402 (12%)
Query: 35 AEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQPLAGFLYADY 94
A LTDDL+VEIL R+P +S+CR K V WR +I+ +HR++LP Q L+GF Y
Sbjct: 12 AASLTDDLVVEILRRLPVRSVCRFKRVCRSWRNLIADREHRKKLP----QTLSGFFYKSS 67
Query: 95 R------VLNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLLCRCW-----NQL 143
+ F V PLI PSFSFLP+CD + +D CNGLLLCRC+ N
Sbjct: 68 SGERCPCSAHHFTNVSG-KGVPLIYPSFSFLPQCDTVVPLDCCNGLLLCRCFQPGPNNSD 126
Query: 144 NEHRTFNYVVCSPTAKKFVVFPDSTCSKKVRPF--LGFDPAVSSHFHVFXXXXXXXXXXX 201
+E F+Y VC+P K++V+ PD+ + L FDPA+SSHFHV
Sbjct: 127 DEIEPFHYAVCNPATKEWVMLPDADWANGETRIACLCFDPAISSHFHVL----------- 175
Query: 202 XXXXXXXXXXXXXXXLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHLX 261
+ IYSSETG+W+ + +GW + + +R +SVF NG LH
Sbjct: 176 ---EYVEAEYEDVTGVEIYSSETGLWTLHV-SGWGDDVFLR--HWANPRSVFLNGFLHSA 229
Query: 262 XXXXXXXXXXXEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSYG 321
EGK WRTI + P G G I ++ L + D
Sbjct: 230 TCAAEIAVVDMEGKKWRTIAM-------------PEPEGDTGIIHQTQGRLCAFNVDPDD 276
Query: 322 DWEISVWVLDDYYGGQWTLQHTVSTMRPFERTMRRRMNPDDCTLVWIEGRKMFFMFYDYV 381
+++S+W+L+DY W L+HTVS++R F M+ R D + + F Y +
Sbjct: 277 IFKLSIWILEDYDTDNWILKHTVSSLRLF-GGMKYRFGFDYQIIAVHPECNLIFFVYGWD 335
Query: 382 HCILTSYEMDSGEVRCLSRPRSYCEPPYLPYIPLFLESLADG 423
L +YEMD EVR + PYLPY+PLF ESLADG
Sbjct: 336 K-TLMAYEMDRKEVRAIRNLGHDSFEPYLPYVPLFNESLADG 376
>Os07g0535200 Cyclin-like F-box domain containing protein
Length = 377
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 145/403 (35%), Positives = 200/403 (49%), Gaps = 52/403 (12%)
Query: 35 AEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQPLAGFLYADY 94
A LTDDL+VEIL R+P +S+CR K V WR +I+ +HR++LP Q L+GF Y
Sbjct: 12 AASLTDDLVVEILRRLPVRSVCRFKRVCRSWRNLIADREHRKKLP----QTLSGFFYKSI 67
Query: 95 R------VLNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLLCRCW-----NQL 143
+ F V PLI PSFSFLP+CD + +D CNGLLLCRC+ N
Sbjct: 68 SGERCPCSAHHFTNVSG-KGVPLIYPSFSFLPQCDTVVPLDCCNGLLLCRCFQPGPNNSD 126
Query: 144 NEHRTFNYVVCSPTAKKFVVFPDSTCSKKVRPF--LGFDPAVSSHFHVFXXXXXXXXXXX 201
+E F+Y VC+P K++V+ PD+ + L FDPA+SSHFHV
Sbjct: 127 DEIEPFHYAVCNPATKEWVMLPDADWANGETRIACLCFDPAISSHFHVL----------- 175
Query: 202 XXXXXXXXXXXXXXXLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHLX 261
+ IYSSETG+W+ + +GW + + +R +SVF NG LH
Sbjct: 176 ---EYVEAEYEDVTGVEIYSSETGLWTLHV-SGWGDDVFLR--HWANPRSVFLNGFLHSA 229
Query: 262 XXXXXXXXXXXEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSYG 321
EGK WRTI + P G G I ++ L + D
Sbjct: 230 TCAAEIAVVDMEGKKWRTIAM-------------PEPEGDTGIIHQTQGRLCAFNVDPDD 276
Query: 322 DWEISVWVLDDYYGGQWTLQHTVSTMRPFERTMRRRMNPDDCTLVWIEGRKMFFMF-YDY 380
+++S+W+L+DY W L+HTVS++R F + +V E +FF++ +D
Sbjct: 277 IFKLSIWILEDYDTDNWILKHTVSSLRLFGGKKYQFGFDYQIIVVHPECNLIFFVYGWDK 336
Query: 381 VHCILTSYEMDSGEVRCLSRPRSYCEPPYLPYIPLFLESLADG 423
L +YEMD EVR + PYLPY+PLF ES ADG
Sbjct: 337 T---LMAYEMDRKEVRVIRNLGHDSSDPYLPYVPLFYESFADG 376
>Os07g0535300 Cyclin-like F-box domain containing protein
Length = 437
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 187/382 (48%), Gaps = 47/382 (12%)
Query: 39 TDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQPLAGFLYADYR--- 95
T DL+V+IL R+P +S+CR K V WR +I+ DHR++LP Q L+GF Y +
Sbjct: 83 TIDLVVDILRRLPVRSVCRSKGVCPYWRDLIADHDHRKKLP----QTLSGFFYTSFSEER 138
Query: 96 --VLNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLLCRCWNQLNEHRTFNYVV 153
+ F V + P LI P+F+FLP+C ++ +DSCNGLLLCRC Q + F+Y V
Sbjct: 139 SAAEHHFTNVTGIGMP-LISPTFAFLPQCKEVIPLDSCNGLLLCRCL-QFDGVSKFHYAV 196
Query: 154 CSPTAKKFVVFPDSTCSKKVRPF--LGFDPAVSSHFHVFXXXXXXXXXXXXXXXXXXXXX 211
C+P +++V+ PD+ + L FDPA+SSHFHV
Sbjct: 197 CNPATEEWVMLPDANWADGENRIACLCFDPAISSHFHVV--------------EYVEDEA 242
Query: 212 XXXXXLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHLXXXXXXXXXXX 271
+ I SS+TG+WS + NGW+ + + +SVF NG LH
Sbjct: 243 ECVTGVEINSSKTGLWSVHV-NGWNGVVLVSLSVN--RRSVFLNGFLHSVTPADEIVAVD 299
Query: 272 XEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSYGDWEISVWVLD 331
EGK WR IP+ +D G I ++ L + D +++S+W L+
Sbjct: 300 MEGKKWRKIPVPDRDNDI-------------GIIHQTQGCLSAFNVDLLDIFKLSIWFLE 346
Query: 332 DYYGGQWTLQHTVSTMRPFERTMRRRMNPDDCTLVWIEGRKMFFMFYDYVHCILTSYEMD 391
DY W L+HTVS++ FE R V + +FF++ + L +YEMD
Sbjct: 347 DYDTNNWILKHTVSSLDLFEGKNYRLDFEYQVIAVHPDCNLIFFVY--GLDNTLMAYEMD 404
Query: 392 SGEVRCL-SRPRSYCEPPYLPY 412
EVR + + YC PYLPY
Sbjct: 405 RKEVRVIRNLGHDYCW-PYLPY 425
>Os05g0172500 Cyclin-like F-box domain containing protein
Length = 382
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 203/400 (50%), Gaps = 49/400 (12%)
Query: 35 AEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQPLAGFLY--- 91
A ELTDDL+VEILSR+P KS+ R + V RWRR+IS P HR++LP Q LAGF +
Sbjct: 18 AAELTDDLIVEILSRLPAKSVRRCRRVCRRWRRLISDPHHRKKLP----QTLAGFFHLSV 73
Query: 92 --ADYRVLNR-FQIVPALDPP-PLIDPSFSFLPKCDDLQLVDSCNGLLLCRCWNQLNEHR 147
+ + V R F V + P + PSFSFLP+ + + +VDSC GLLLC+C+ +
Sbjct: 74 NESRFPVEARHFVNVSGIGGRLPHVCPSFSFLPRFERISMVDSCGGLLLCQCFESSD--- 130
Query: 148 TFNYVVCSPTAKKFVVFPDSTCSKKVRPF---LGFDPAVSSHFHVFXXXXXXXXXXXXXX 204
F YVV +P ++++V P+S K R F LGFDP VSS FHVF
Sbjct: 131 AFRYVVFNPCTEEWIVLPESGFHPKDRGFCARLGFDPDVSSQFHVF-------------- 176
Query: 205 XXXXXXXXXXXXLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHLXXXX 264
++IYSSET W+ ++ W I +S F NGMLHL
Sbjct: 177 --EFVPCDDVTGVKIYSSETREWNYR-ESEWCTDTGI----SDICRSAFCNGMLHLVSYQ 229
Query: 265 XXXXXXXXEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSYGDWE 324
EG+ WRT + +G P G I S L++ S +
Sbjct: 230 RSIVSVDVEGRTWRTTKVPKMEGVEEVRDWLP------GSICQSEGKLYYLSQYNTVPIS 283
Query: 325 ISVWVLDDYYGGQWTLQHTVSTMRPFERTMRRRMNPDDC--TLVWIEGRKMFFMFYDYVH 382
+S+W+L+DY +WTL+H+V+ +E+ + + + C +V ++ ++++ DY
Sbjct: 284 LSIWLLEDYSKDEWTLKHSVTNELLYEKINSKYKSSEFCYVVIVHLDCNLIYYITRDYT- 342
Query: 383 CILTSYEMDSGEVRCLSRPRSYCEPPYLPYIPLFLESLAD 422
L +Y+MD E R + S C LPY+PL+ E+L++
Sbjct: 343 --LMAYDMDHKESRVIQALGSDCILECLPYVPLYAETLSN 380
>Os05g0139200 Cyclin-like F-box domain containing protein
Length = 399
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 198/405 (48%), Gaps = 46/405 (11%)
Query: 35 AEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQPLAGFLYADY 94
A +LTDDL+VEILSR+P KS+CR KCVS RWRR+ISH DHR++LP LAGF+ + Y
Sbjct: 22 AADLTDDLIVEILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLP----HTLAGFI-SHY 76
Query: 95 RV--LNRFQIVPALDPPPLI-----------DPSFSFLPKCDDLQLVDSCNGLLLCRCWN 141
V + ++P D DPS SFLP + D CNGLLLC C
Sbjct: 77 SVPLHDGIVLIPHFDSIDGGEEDEEEHRLVPDPSLSFLPGYRTIFPKDCCNGLLLCLCCK 136
Query: 142 QLNEHRTFNYVVCSPTAKKFVVFPDSTCSKKVRPF-LGFDPAVSSHFHVFXXXXXXXXXX 200
+ +YVVC+P +++++ P+ + V LGFDPA+S +FHVF
Sbjct: 137 NSPRDES-DYVVCNPATQRWIILPEIDRADPVSTVRLGFDPALSPYFHVF---------- 185
Query: 201 XXXXXXXXXXXXXXXXLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHL 260
+ I+S ETG WS +NGW + +KS F +GM++
Sbjct: 186 ----AILEHVDGCVSGVEIFSLETGAWSHR-ENGWGD--EDDHTVHPDAKSAFVDGMVNF 238
Query: 261 XXXXXXXXXXXXEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSY 320
EGK W+TIP ++ + C ++G FI S+ L++ + +
Sbjct: 239 ISYNSAIIAVDTEGKKWKTIPFL-EEMTCEC-----ISNGILAFIGQSQGHLYYINFRDW 292
Query: 321 GDWEISVWVLDDYYGGQWTLQHTVSTMRPFERTMRRRMNPDDCTLVWIEGRKMFFMFYDY 380
+SVW LDDY W+ ++ +ST + F T + + E +F++F D
Sbjct: 293 DSSILSVWTLDDYCSCGWSFKYNISTSQLFGWTNMKLEREYSLIAIHPECNMIFYVFRDE 352
Query: 381 VHCILTSYEMDSGEVRCLSRPRS---YCEPPYLPYIPLFLESLAD 422
L SY+MD G+V + R P LPY+P+F+ESL D
Sbjct: 353 GQNTLLSYDMDRGKVNSICNMRDPFWKTWDPCLPYVPVFMESLPD 397
>Os07g0535700 Galactose oxidase, central domain containing protein
Length = 335
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 169/362 (46%), Gaps = 36/362 (9%)
Query: 69 ISHPDHRRQLPRHHLQPLAGFLYA--DYRV---LNRFQIVPALDPPPLIDPSFSFLPKCD 123
I+ +HR++LP Q L+GF Y DY + R PL+ P+FSFLP+C
Sbjct: 1 IADHEHRKKLP----QTLSGFFYKSIDYERCPHMARHFTNATGRGMPLVCPTFSFLPQCH 56
Query: 124 DLQLVDSCNGLLLCRCWNQLNEHRTFNYVVCSPTAKKFVVFPDST--CSKKVRPFLGFDP 181
+ ++DSCNGLLLCRC + E F Y VC+P + V+ PD+ + L FDP
Sbjct: 57 HVVILDSCNGLLLCRC-HVSRETLQFQYAVCNPATGECVMLPDANWAIDENRTACLCFDP 115
Query: 182 AVSSHFHVFXXXXXXXXXXXXXXXXXXXXXXXXXXLRIYSSETGVWSDEIDNGWSNRIRI 241
A+SSHFHV + IYSS+TG+WS + NGW + + +
Sbjct: 116 AISSHFHVLEYVEDEEYVEDEDEYDALVTG-----VVIYSSKTGLWSLHV-NGWDDEVMV 169
Query: 242 RRDQKGGSKSVFFNGMLHLXXXXXXXXXXXXEGKNWRTIPLAHKDGSPLCGAHPPCASGP 301
VF NG LH EGK WR IP+ DG
Sbjct: 170 SLPVD--RTRVFLNGFLH-SVTTCDIVAVDMEGKKWRKIPMPDPDGDI------------ 214
Query: 302 EGFIALSRDLLHFASTDSYGDWEISVWVLDDYYGGQWTLQHTVSTMRPFERTMRRRMNPD 361
G I ++ L + D E+S+W L+DY W L+HTVS++ F R + +++ D
Sbjct: 215 -GIIHQTQGRLCAFNVDPNDILELSIWFLEDYDTDNWILKHTVSSINLFGRK-KYQLDFD 272
Query: 362 DCTLVWIEGRKMFFMFYDYVHCILTSYEMDSGEVRCLSRPRSYCEPPYLPYIPLFLESLA 421
+ + F Y + H L +YEMD EVR + + PYLPY+P+F ESL
Sbjct: 273 YQVIAVHPECNLIFFVYGW-HNTLMAYEMDRKEVRVIRKLGHESCLPYLPYVPMFSESLP 331
Query: 422 DG 423
DG
Sbjct: 332 DG 333
>Os05g0172100 Galactose oxidase, central domain containing protein
Length = 389
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 183/408 (44%), Gaps = 41/408 (10%)
Query: 27 SNGTTSAIAEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQ-- 84
+ TT A ELTDDL+V+ILSR+P P R P+
Sbjct: 11 GSSTTRNPAAELTDDLIVDILSRLPASRSADASAYPGGGAASSPTPTTARSSPKPSPASS 70
Query: 85 PLAGFLYADYRVLNRFQIVPALDPPPLIDPSFSFLPKCD--DLQLVDSCNGLLLCRCWNQ 142
A +A ++ F V P LI P+ SFLP+ D +++VD C GLLL RC+
Sbjct: 71 TAARTNHAAPKLARHFVNVTGRGRP-LICPTISFLPRFDLEGMRMVDCCGGLLLFRCFMS 129
Query: 143 LNEHRTFNYVVCSPTAKKFVVFPDSTCSKKVRPF--LGFDPAVSSHFHVFXXXXXXXXXX 200
+E F Y+VC+P+ +++V FPDS + + + F LGFDPAVSSHFHVF
Sbjct: 130 SDE---FCYLVCNPSTEEWVAFPDSGYNPEWQFFTHLGFDPAVSSHFHVFEFVMGDCGFV 186
Query: 201 XXXXXXXXXXXXXXXXLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHL 260
+ IYSSETG+W + +++ W + + FFNGMLHL
Sbjct: 187 EG--------------VEIYSSETGLW-NFMESEWDPETTVYDRTR-----TFFNGMLHL 226
Query: 261 XXXXXXXXXXXXEGKNWRTI--PLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTD 318
EG+ W++I P + A C FI S+ L + S
Sbjct: 227 VEEGIAILSVDVEGEIWQSIGAPRPELENVEDMFALVSC------FIGQSQGKLCYLSAY 280
Query: 319 SYGDWEISVWVLDDYYGGQWTLQHTVSTMRPFER-TMRRRMNPDDCTLVWIEG--RKMFF 375
W +S+WVL+DY +WTL+H ++T + E+ + + + D + +
Sbjct: 281 DTVPWNLSIWVLEDYSKDEWTLKHKLTTEQLSEKINCKCKTDFDKAWYYHVVAVHSECNL 340
Query: 376 MFYDYVHCILTSYEMDSGEVRCLSRPRSYCEPPYLPYIPLFLESLADG 423
++Y L SY+M + + YLPY+PL+ E L+ G
Sbjct: 341 IYYIAGGDTLMSYDMGHKQSCVIENLGPGNNSGYLPYVPLYSEILSHG 388
>Os01g0380800 Cyclin-like F-box domain containing protein
Length = 391
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 142/330 (43%), Gaps = 39/330 (11%)
Query: 35 AEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQPLAGFLY--A 92
+L DDL +++LSR+PYKS CR KC W S+P + +LP+ PL GFLY +
Sbjct: 11 GNKLPDDLTLDVLSRLPYKSFCRAKCTCTGWLSFSSNPHYCDKLPK----PLTGFLYQKS 66
Query: 93 DYRVLNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLLCRCWNQLNEHRTFNYV 152
D + + P D S SFLP+ + L+L DSCNGL+LC+ + N+V
Sbjct: 67 DSSAIEVASLCPD---DRSFDTSLSFLPRYEWLELTDSCNGLVLCKYGRNTSSPSVANFV 123
Query: 153 VCSPTAKKFVVFPDSTCSKKVRPF---LGFDPAVSSHFHVFXXXXXXXXXXXXXXXXXXX 209
VC+P ++++ P++ + + L FDP+ S +F+VF
Sbjct: 124 VCNPATRQWMELPETLLEPEGHSYATKLAFDPSWSPYFYVF---------NFEEKRNPVE 174
Query: 210 XXXXXXXLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHLXXXX----- 264
+ I+SS W +D+ W +I D + V G L L
Sbjct: 175 RWACISKVAIFSSRNSTWF--MDDKWEPSNQISVDCQ---PHVLLGGKLFLQTSSCRVLV 229
Query: 265 XXXXXXXXEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSYGDWE 324
+ +W +K SP+ C + G++ +LH+ D+ G
Sbjct: 230 IDAFHNTEQPSHWIFDLPGYKPTSPMVD----CLT---GYLGHKSGVLHYVQPDT-GGRT 281
Query: 325 ISVWVLDDYYGGQWTLQHTVSTMRPFERTM 354
+ VW D Y G W L+H +S F + +
Sbjct: 282 LLVWARDGYPHGDWNLKHRLSMSDAFGQDI 311
>Os05g0172400
Length = 282
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 84/140 (60%), Gaps = 18/140 (12%)
Query: 62 SMRWRRVISHPDHRRQLPRHHLQPLAGFLY-----ADYRVLNRFQIVPALDPPPLIDPSF 116
S RWR +IS PDHR++LP Q LAGF Y + + + R + + PL+ PSF
Sbjct: 33 SRRWRGLISDPDHRKKLP----QTLAGFFYHSENESRFPMEARHFVNVSGRGRPLVYPSF 88
Query: 117 SFLPKCDDLQLVDSCNGLLLCRCWNQLNEHRTFNYVVCSPTAKKFVVFPDST------CS 170
SFLP+ + +++VDSC GLLLCRC+ + R YVVC+P ++ V P+S+
Sbjct: 89 SFLPRFESIRMVDSCGGLLLCRCFESSDASR---YVVCNPATEELVALPESSYDAEGGGE 145
Query: 171 KKVRPFLGFDPAVSSHFHVF 190
+++ LGFDP VSS FHVF
Sbjct: 146 EEMCARLGFDPDVSSQFHVF 165
>Os01g0379400 Cyclin-like F-box domain containing protein
Length = 433
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 160/378 (42%), Gaps = 37/378 (9%)
Query: 28 NGTTSAIAEELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQPLA 87
N S LTDDL+V+ILSR+P KS+C KCV W + S +LPR +P A
Sbjct: 53 NSKKSKCTCTLTDDLVVDILSRLPLKSVCCFKCVCKSWASLFSDQYFCTKLPR---RP-A 108
Query: 88 GFLYADYRVLNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLLCRCWNQLNEHR 147
G LY D + QI I S SF+P ++L+LVD NGL+L ++ +
Sbjct: 109 GLLYQDSNN-SSIQIAKLPSGNSEIGTSLSFMPHHENLKLVDCSNGLILFTHGSKSDSPD 167
Query: 148 TFNYVVCSPTAKKFVVFPDSTCSK----KVRPFLGFDPAVSSHFHVFXXXXXXXXXXXXX 203
+ +++VC+P ++++ PD TC + L F+P+ S HF VF
Sbjct: 168 SSHFIVCNPATQEWIALPD-TCPRVNGSDYIAMLAFNPSSSCHFFVF---------NFQK 217
Query: 204 XXXXXXXXXXXXXLRIYSSETGVWSDEIDNGWSNRIRIRRDQKGGSKSVFFNGMLHLXXX 263
+ I+SSE W D+ + I + V +G+L+L
Sbjct: 218 RRSPHSGVFVITEVEIFSSEDFTWI--ADDAFETEIMMI-----SMPHVLLHGVLYLRTV 270
Query: 264 XXXXXXXXXEGKNWRTIPLAHKDGSPLCGAHPPCASGPEGFIALSRDLLHFASTDSYGDW 323
P H+ L G P + G + S +LH+ + G W
Sbjct: 271 EHSVFAIETPH---MYKPWIHRWTFELPGDSCPMNNYIWGCLGESSGILHYMQPNYDGCW 327
Query: 324 EISVWVLDDYYGGQWTLQHTVSTMRPFERTMRRRMNP------DDCTLVWIEGRKMFFMF 377
++VW L+ + QW++ H++S + F R +P D ++ + +
Sbjct: 328 -LNVWRLESRH-QQWSMTHSLSMIDAFGRGTLVHGDPFSVDWSADYGMLSFDLEREIVFL 385
Query: 378 YDYVHCILTSYEMDSGEV 395
+D V + SY + +G++
Sbjct: 386 HDRVSSKVLSYSIRTGKL 403
>Os05g0139300 Cyclin-like F-box domain containing protein
Length = 309
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 97/169 (57%), Gaps = 19/169 (11%)
Query: 36 EELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQPLAGFLYADYR 95
++L DDL+V+ILSR+P KS+CR KCVS RWRR+ISH DHR++LP L+GF+ Y
Sbjct: 17 DDLPDDLIVDILSRLPAKSVCRFKCVSWRWRRLISHRDHRKKLP----HTLSGFISRYYG 72
Query: 96 VLNRFQIV--PALDPPPLI-----------DPSFSFLPKCDDLQLVDSCNGLLLCRCWNQ 142
LN ++V P D DPS SFL + D CNGLLLC C
Sbjct: 73 PLNDDELVSIPHFDSIDGGEEDEEEHRLVPDPSLSFLLGYMSISPKDCCNGLLLCLCCKN 132
Query: 143 LNEHRTFNYVVCSPTAKKFVVFPDSTCSKKVRPF-LGFDPAVSSHFHVF 190
+ +YVVC+P +++++ P+ ++ L FDPA+S +FHVF
Sbjct: 133 SPRDES-DYVVCNPATQRWIILPEIDDYDQLASIRLCFDPALSPYFHVF 180
>Os08g0529400 Cyclin-like F-box domain containing protein
Length = 369
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 37 ELTDDLLVEILSRVPYKSLCRLKCVSMRWRRVISHPDHRRQLPRHHLQPLAGFLYADYRV 96
E DDLLVEILSR+P+KSL R KCVS WR +IS D RR+LP L F+
Sbjct: 2 EFCDDLLVEILSRLPFKSLARFKCVSRSWRALISGGDLRRRLP---LLAAGLFVGDGGGG 58
Query: 97 LNRFQIVPALDPPPLIDPSFSFLPKCDDLQLVDSCNGLLLCRCWNQLNEHRTFNYVVCSP 156
R+ + D D SF L + ++VD+C GLLL R + YV C P
Sbjct: 59 EPRYATACSGDGVEFCDMSFFPLAE-TAARVVDACEGLLLYRSLAAASAM----YVAC-P 112
Query: 157 TAKKFVVFPDSTCSKKVRPFLGFDPA----VSSHFHVFXXXXXXXXXXXXXXXXXXXXXX 212
+++ P ++ P L FDPA S +HV
Sbjct: 113 ATRRWAALPVPRREAQL-PLLAFDPADGGGGSPRYHVV---------------CFVAWQE 156
Query: 213 XXXXLRIYSSETGVWSD 229
+ ++SSETG W++
Sbjct: 157 RGATVDVFSSETGAWAE 173
>Os05g0177100 Conserved hypothetical protein
Length = 135
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 7/131 (5%)
Query: 296 PCASGPEGFIALSRDLLHFASTDSYGDWEISVWVLDDYYGGQWTLQHTVSTMRPFERTMR 355
P EGFI LS+ L+F ++D +++SVWVL+DY QW +HTVS + F+ +
Sbjct: 8 PFNGIGEGFIVLSQGSLYFVNSDHDKPYKVSVWVLEDYSSEQWIWKHTVSHLHLFQT--K 65
Query: 356 RRMNPDDCTLVWIE-GRKMFFMFYDYVHCILTSYEMDSGEVRCLSRPRSYCE--PPYLPY 412
R + D +V I R F+ + + +L SYE+DS EV + CE YLPY
Sbjct: 66 RLLFGHDYKVVSIHPERNNIFLVWPHSK-MLMSYELDSREVHFICGIGG-CEWVMYYLPY 123
Query: 413 IPLFLESLADG 423
+PL+LESLADG
Sbjct: 124 VPLYLESLADG 134
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.140 0.467
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,448,075
Number of extensions: 640300
Number of successful extensions: 2294
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 2224
Number of HSP's successfully gapped: 18
Length of query: 424
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 320
Effective length of database: 11,605,545
Effective search space: 3713774400
Effective search space used: 3713774400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)