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Os05g0177100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.18 (0.0296) R2 : 0.49
β1 : -1.14 (0.111) R2dD : 0.132 R2D : 0.0874
β2 : 0.689 (0.0823) R2dC : 0.0922 R2C : 0.182
β3 : -1.52 (0.135) R2dE : 0.192 R2E : 0.244
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.155 (0.067) R2dN8 : 0.00936 R2N8 : 0.0391
σ : 0.545
deviance : 136.87
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C
peak time of C : 17.8
E
wheather : temperature
threshold : 30.44
memory length : 70
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
136.13 0.548 6.18 -1.19 0.677 -1.57 -0.516 0.245 0.144 17.9 30.74 77 -- --
136.14 0.543 6.18 -1.16 0.684 -1.58 -0.588 -- 0.156 17.9 30.78 71 -- --
136.66 0.544 6.18 -1.2 0.69 -1.53 -- 0.408 0.141 17.8 30.67 71 -- --
136.87 0.545 6.18 -1.14 0.689 -1.52 -- -- 0.155 17.8 30.44 70 -- --
156.03 0.582 6.18 -1.35 -- -2.29 -- 0.682 0.0848 -- 43.61 122 -- --
166.85 0.606 6.11 -0.773 1.09 -- -0.00162 -- 0.439 16.6 -- -- -- --
166.85 0.605 6.11 -0.773 1.09 -- -- -- 0.439 16.6 -- -- -- --
155.65 0.581 6.18 -1.27 -- -2.03 -- -- 0.0751 -- 31.1 132 -- --
167.34 0.602 6.13 -- 0.842 -1.06 -- -- 0.364 17.3 31.46 37 -- --
230.74 0.71 6.11 -0.815 -- -- -- -- 0.41 -- -- -- -- --
182.58 0.632 6.09 -- 1.11 -- -- -- 0.525 16.5 -- -- -- --
195.21 0.651 6.13 -- -- -1.74 -- -- 0.289 -- 32.97 122 -- --
248.26 0.735 6.08 -- -- -- -- -- 0.5 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 124.34 temperature 30 90 < th dose dependent rect. 15 17
4 125.64 temperature 15 90 > th dose dependent rect. 8 17
13 126.74 radiation 1 43200 < th dose dependent rect. 21 6
16 127.06 temperature 30 90 < th dose dependent rect. 11 22
22 127.66 temperature 15 10 > th dose dependent rect. 9 17
25 127.91 temperature 30 10 < th dose dependent rect. 12 21
40 128.47 wind 5 43200 > th dose dependent rect. 19 2
44 128.65 temperature 15 90 > th dose dependent rect. 8 21
56 129.18 radiation 1 43200 < th dose dependent rect. 21 3
65 129.49 wind 9 43200 > th dose independent rect. 19 2
75 129.88 wind 9 43200 < th dose independent rect. 19 2
87 130.22 wind 5 43200 < th dose independent rect. 19 2
90 130.27 wind 5 43200 < th dose independent rect. 17 5
91 130.30 wind 5 43200 > th dose independent rect. 17 5
99 130.45 radiation 1 43200 < th dose dependent rect. 1 2
105 130.65 radiation 1 43200 < th dose dependent rect. 23 1
107 130.66 temperature 15 10 > th dose dependent rect. 8 22
110 130.70 wind 5 43200 < th dose independent rect. 15 16
111 130.72 wind 5 43200 < th dose independent rect. 5 17
116 130.75 wind 5 43200 > th dose independent rect. 5 17
117 130.77 wind 5 43200 > th dose independent rect. 15 16
118 130.78 wind 5 43200 > th dose independent rect. 16 7
134 130.91 wind 5 43200 < th dose independent rect. 14 19
138 130.94 wind 5 43200 > th dose independent sin 15 NA
172 131.10 wind 5 43200 < th dose independent rect. 16 7
177 131.13 wind 5 43200 < th dose independent sin 14 NA
197 131.22 wind 5 43200 < th dose independent rect. 11 21
205 131.25 wind 5 43200 > th dose dependent rect. 15 7
212 131.27 wind 9 43200 < th dose dependent rect. 20 1
216 131.29 wind 5 43200 > th dose independent rect. 15 11
221 131.30 wind 5 43200 > th dose independent rect. 11 21
230 131.32 wind 5 43200 > th dose independent rect. 15 13
268 131.45 wind 5 43200 > th dose dependent sin 16 NA
275 131.49 atmosphere 995 43200 > th dose independent rect. 14 3
281 131.50 atmosphere 995 43200 < th dose independent rect. 14 4
288 131.50 atmosphere 995 43200 < th dose dependent rect. 15 2
324 131.56 wind 5 43200 > th dose dependent rect. 14 10
366 131.63 humidity 80 43200 > th dose independent rect. 23 1
396 131.67 wind 5 43200 > th dose dependent rect. 14 16
442 131.75 wind 5 43200 > th dose dependent rect. 14 14
445 131.76 wind 5 43200 < th dose independent rect. 15 11
481 131.83 wind 5 43200 < th dose independent no NA NA
526 131.91 wind 3 43200 > th dose dependent rect. 3 19
548 131.97 radiation 40 1440 < th dose dependent rect. 18 3
589 132.10 wind 5 43200 > th dose independent no NA NA
654 132.21 wind 5 43200 > th dose independent sin 22 NA
693 132.27 wind 5 43200 < th dose independent rect. 20 23
720 132.34 wind 5 43200 < th dose independent sin 23 NA
813 132.56 atmosphere 995 43200 > th dose independent sin 22 NA
830 132.59 wind 3 43200 > th dose dependent rect. 9 23
833 132.60 wind 3 43200 > th dose dependent rect. 11 23
850 132.64 atmosphere 995 43200 < th dose independent sin 21 NA
854 132.64 wind 5 43200 > th dose dependent rect. 10 15
874 132.67 wind 3 43200 > th dose dependent rect. 13 23
936 132.82 wind 3 43200 > th dose dependent no NA NA