Os08g0529300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os08g0529300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 209.25 | 0.68 | 3.19 | 0.0615 | 0.313 | 1.63 | 0.181 | 2.01 | -0.0219 | 10.1 | 1015 | 4878 | -- | -- |
| 212.8 | 0.679 | 3.16 | 0.236 | 0.31 | 1.09 | 0.134 | -- | 0.0317 | 10.1 | 1013 | 4948 | -- | -- |
| 209.38 | 0.674 | 3.19 | 0.0736 | 0.312 | 1.67 | -- | 2.08 | -0.0203 | 10.1 | 1015 | 4878 | -- | -- |
| 212.86 | 0.68 | 3.16 | 0.216 | 0.312 | 1.08 | -- | -- | 0.0187 | 10 | 1013 | 4936 | -- | -- |
| 215.26 | 0.683 | 3.2 | 0.0724 | -- | 1.71 | -- | 2.17 | -0.0228 | -- | 1015 | 4878 | -- | -- |
| 241.36 | 0.728 | 3.19 | 0.00372 | 0.304 | -- | 0.153 | -- | -0.141 | 10.3 | -- | -- | -- | -- |
| 241.46 | 0.728 | 3.19 | 0.00974 | 0.304 | -- | -- | -- | -0.14 | 10.3 | -- | -- | -- | -- |
| 218.67 | 0.689 | 3.16 | 0.212 | -- | 1.08 | -- | -- | 0.0203 | -- | 1013 | 4960 | -- | -- |
| 214 | 0.681 | 3.16 | -- | 0.309 | 1.04 | -- | -- | -0.00653 | 9.95 | 1014 | 4890 | -- | -- |
| 247.07 | 0.734 | 3.2 | 0.00505 | -- | -- | -- | -- | -0.141 | -- | -- | -- | -- | -- |
| 241.46 | 0.727 | 3.19 | -- | 0.304 | -- | -- | -- | -0.141 | 10.3 | -- | -- | -- | -- |
| 219.78 | 0.69 | 3.17 | -- | -- | 1.04 | -- | -- | -0.00852 | -- | 1014 | 4915 | -- | -- |
| 247.07 | 0.734 | 3.2 | -- | -- | -- | -- | -- | -0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 208.85 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 8 | 13 |
| 21 | 209.84 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 9 | 11 |
| 24 | 209.92 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 9 | 11 |
| 29 | 209.97 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 21 | NA |
| 42 | 210.09 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 68 | 210.39 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 10 | 3 |
| 99 | 210.63 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 121 | 210.82 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 11 | 4 |
| 134 | 210.91 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 11 | 4 |
| 138 | 210.94 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 13 | 5 |
| 166 | 211.14 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 13 | 6 |
| 198 | 211.31 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 22 | NA |
| 210 | 211.37 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 22 | NA |
| 262 | 211.78 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 326 | 212.25 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 330 | 212.28 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 344 | 212.37 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 413 | 212.93 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 448 | 213.16 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 452 | 213.18 | atmosphere | 1015.0 | 4320 | > th | dose dependent | no | NA | NA |
| 461 | 213.23 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 464 | 213.25 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 19 | 23 |
| 469 | 213.28 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 577 | 213.84 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 618 | 214.07 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 16 | 5 |
| 720 | 214.47 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 722 | 214.48 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 727 | 214.49 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 733 | 214.50 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 24 | 15 |
| 757 | 214.60 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 927 | 215.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 996 | 215.20 | humidity | 50.0 | 14400 | > th | dose independent | sin | 6 | NA |