Os01g0824700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os01g0824700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.12 | 0.463 | 5.19 | 2.99 | 0.694 | -1.2 | 0.0953 | 0.788 | 4.08 | 6.14 | 24.6 | 1372 | -- | -- |
| 97.99 | 0.461 | 5.16 | 3.22 | 0.696 | -1.18 | 0.0688 | -- | 4.15 | 6.12 | 24.5 | 1372 | -- | -- |
| 97.14 | 0.459 | 5.19 | 2.99 | 0.694 | -1.2 | -- | 0.786 | 4.08 | 6.15 | 24.6 | 1369 | -- | -- |
| 97.97 | 0.461 | 5.16 | 3.24 | 0.703 | -1.16 | -- | -- | 4.15 | 6.13 | 24.6 | 1372 | -- | -- |
| 121.55 | 0.513 | 5.2 | 3 | -- | -1.3 | -- | 0.777 | 4.08 | -- | 24.6 | 1337 | -- | -- |
| 141.68 | 0.558 | 5.06 | 3.65 | 0.806 | -- | 0.0703 | -- | 4.58 | 5.69 | -- | -- | -- | -- |
| 141.69 | 0.557 | 5.06 | 3.65 | 0.807 | -- | -- | -- | 4.58 | 5.69 | -- | -- | -- | -- |
| 122.57 | 0.516 | 5.17 | 3.23 | -- | -1.25 | -- | -- | 4.13 | -- | 24.5 | 1342 | -- | -- |
| 115.02 | 0.499 | 5.33 | -- | 0.771 | -2.97 | -- | -- | 3.42 | 5.46 | 19.3 | 47520 | -- | -- |
| 175.47 | 0.619 | 5.07 | 3.67 | -- | -- | -- | -- | 4.6 | -- | -- | -- | -- | -- |
| 492.1 | 1.04 | 5.15 | -- | 0.866 | -- | -- | -- | 4.17 | 5.5 | -- | -- | -- | -- |
| 146.62 | 0.564 | 5.35 | -- | -- | -3.01 | -- | -- | 3.38 | -- | 19.34 | 47520 | -- | -- |
| 531.11 | 1.08 | 5.17 | -- | -- | -- | -- | -- | 4.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.09 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 8 | 93.22 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 15 | 93.36 | humidity | 60 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 18 | 93.39 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 45 | 94.38 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 50 | 94.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 54 | 94.95 | humidity | 70 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 57 | 94.97 | humidity | 70 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 73 | 95.32 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 134 | 96.55 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 168 | 97.05 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 171 | 97.09 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 2 |
| 172 | 97.09 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 173 | 97.11 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 179 | 97.16 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 186 | 97.23 | humidity | 60 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 210 | 97.38 | humidity | 60 | 43200 | < th | dose dependent | sin | 7 | NA |
| 240 | 97.50 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 242 | 97.51 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 245 | 97.52 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 17 |
| 253 | 97.57 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 280 | 97.75 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 282 | 97.77 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 288 | 97.80 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 290 | 97.81 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 304 | 97.85 | temperature | 25 | 1440 | < th | dose independent | sin | 14 | NA |
| 312 | 97.90 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 318 | 97.91 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 321 | 97.91 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 324 | 97.91 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 15 |
| 355 | 98.02 | radiation | 10 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 356 | 98.02 | radiation | 10 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 478 | 98.43 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 500 | 98.50 | temperature | 20 | 14400 | < th | dose dependent | sin | 10 | NA |
| 538 | 98.63 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 548 | 98.65 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 556 | 98.68 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 575 | 98.75 | temperature | 25 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 583 | 98.78 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 14 |
| 623 | 98.86 | radiation | 1 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 637 | 98.88 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 655 | 98.94 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 676 | 99.00 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 677 | 99.00 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 731 | 99.09 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 9 |
| 799 | 99.19 | temperature | 25 | 1440 | > th | dose independent | sin | 14 | NA |
| 801 | 99.19 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 12 |
| 811 | 99.21 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 815 | 99.22 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 12 |
| 828 | 99.25 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 9 |
| 842 | 99.28 | radiation | 20 | 43200 | > th | dose dependent | rect. | 15 | 16 |
| 914 | 99.40 | humidity | 60 | 43200 | < th | dose independent | sin | 9 | NA |
| 923 | 99.41 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 23 |
| 954 | 99.47 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 2 |