BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0162500 Os05g0162500|AK067124
(126 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0162500 Protein kinase-like domain containing protein 259 3e-70
Os06g0334300 Similar to Resistance protein candidate (Fragm... 134 1e-32
Os03g0281500 Similar to Resistance protein candidate (Fragm... 101 2e-22
Os01g0155500 Similar to Resistance protein candidate (Fragm... 94 2e-20
Os03g0124200 Similar to Pto-like protein kinase F 92 1e-19
Os03g0759600 87 2e-18
Os10g0534500 Similar to Resistance protein candidate (Fragm... 84 3e-17
Os01g0769700 Similar to Resistance protein candidate (Fragm... 83 5e-17
Os05g0280700 Similar to Resistance protein candidate (Fragm... 82 8e-17
Os03g0333200 Similar to Resistance protein candidate (Fragm... 79 7e-16
Os05g0318600 Similar to Protein kinase (Pto kinase) (Serine... 79 7e-16
Os04g0619600 Similar to Resistance protein candidate (Fragm... 72 8e-14
Os01g0253000 Similar to LpimPth3 71 2e-13
Os07g0147600 Protein kinase-like domain containing protein 65 1e-11
Os05g0317900 Similar to Resistance protein candidate (Fragm... 65 1e-11
>Os05g0162500 Protein kinase-like domain containing protein
Length = 126
Score = 259 bits (662), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MDSTFRKLKLVLALVGIIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLE 60
MDSTFRKLKLVLALVGIIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLE
Sbjct: 1 MDSTFRKLKLVLALVGIIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLE 60
Query: 61 FVLQLQEAGPDMSNIDSMNQISELPSNAQRISSLEISTADESRTAMDYSQMSTSNAFSQL 120
FVLQLQEAGPDMSNIDSMNQISELPSNAQRISSLEISTADESRTAMDYSQMSTSNAFSQL
Sbjct: 61 FVLQLQEAGPDMSNIDSMNQISELPSNAQRISSLEISTADESRTAMDYSQMSTSNAFSQL 120
Query: 121 INTEGR 126
INTEGR
Sbjct: 121 INTEGR 126
>Os06g0334300 Similar to Resistance protein candidate (Fragment)
Length = 859
Score = 134 bits (338), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 89/117 (76%), Gaps = 7/117 (5%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEA-GPDMSNI 75
I+D+R++G+IRP+SLRK+GETVEKCLA+YGVERP+MGDVLWNLE+VLQLQ+A +S++
Sbjct: 743 IVDQRVSGSIRPDSLRKFGETVEKCLADYGVERPSMGDVLWNLEYVLQLQDADSSTVSDV 802
Query: 76 DSMNQISELPSNAQRISSLE---ISTADESRTA---MDYSQMSTSNAFSQLINTEGR 126
+SMN+I ELPS Q I +LE ++ A+ + D S +S S FSQLI EGR
Sbjct: 803 NSMNRIVELPSQVQNIGALESISVTMAEAGASHEPDHDLSDVSMSRVFSQLIKAEGR 859
>Os03g0281500 Similar to Resistance protein candidate (Fragment)
Length = 839
Score = 101 bits (251), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/110 (48%), Positives = 70/110 (63%), Gaps = 13/110 (11%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
I+D++IAGTIRP+SL+K+ +T EKCLAEYGVERP+MGDVLW LE+ LQLQ A PD S
Sbjct: 737 IVDQKIAGTIRPDSLKKFADTAEKCLAEYGVERPSMGDVLWCLEYALQLQVASPDSS--- 793
Query: 77 SMNQISELPSNAQRISSLEISTADESRTAM--DYSQMSTSNAFSQLINTE 124
+ QR SS+ D + +A D MS FS+++ +E
Sbjct: 794 --------VTTLQRSSSISSVVTDATVSANLGDLDGMSMKRVFSKMLKSE 835
>Os01g0155500 Similar to Resistance protein candidate (Fragment)
Length = 894
Score = 94.4 bits (233), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 11/121 (9%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEA-GPDMSNI 75
I+D+RIAGT+RP +LRKYGETV +CLA+ G +RP M DV+W+L+FV +LQE G D S++
Sbjct: 774 IVDRRIAGTVRPAALRKYGETVARCLADRGADRPAMEDVVWSLQFVARLQEVDGLDASDV 833
Query: 76 DSMNQISEL-PSNAQRISSLEISTADESRT---------AMDYSQMSTSNAFSQLINTEG 125
S+N + +L P + ++ RT DY+ S F Q++N G
Sbjct: 834 SSLNMVHQLMPPTSLHARQRSAGESETGRTDADEDSSVVDDDYTDASMRGIFWQMVNVRG 893
Query: 126 R 126
R
Sbjct: 894 R 894
>Os03g0124200 Similar to Pto-like protein kinase F
Length = 848
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Query: 14 LVGIIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMS 73
L I D RIAG + SLRK+ ET EKCLA+YG++RP+MGDVLWNLE+ LQLQE +
Sbjct: 735 LAKITDPRIAGQVNGNSLRKFAETAEKCLADYGLDRPSMGDVLWNLEYCLQLQETHVNRD 794
Query: 74 NI-DSMNQISELPSNAQRISSLEISTADESRTAMDYSQMSTSNAFSQLINTEGR 126
DS ++ P++ + ST+ ++ S ++ S AFSQL + +GR
Sbjct: 795 AFEDSGAVATQFPADVVVPRWVPSSTSFLMDDSVTDSGIANSKAFSQLSSGDGR 848
>Os03g0759600
Length = 843
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 54/84 (64%), Gaps = 10/84 (11%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
IID I+G IRP+SL + E EKCLA+YGV+RP+MGDVLW LEF LQLQE G
Sbjct: 754 IIDPHISGQIRPDSLEIFAEAAEKCLADYGVDRPSMGDVLWKLEFALQLQEKG------- 806
Query: 77 SMNQISELPSNAQRISSLEISTAD 100
I + SN + SLE+++ D
Sbjct: 807 ---DIVDGTSNQFPMKSLEVTSGD 827
>Os10g0534500 Similar to Resistance protein candidate (Fragment)
Length = 844
Score = 83.6 bits (205), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/119 (40%), Positives = 76/119 (63%), Gaps = 9/119 (7%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDM-SNI 75
I+D +AG SLRK+ ET +CLA+YG +RP+MGDV+WNLE+ LQLQE+ P + +
Sbjct: 726 IVDPAVAGDASTNSLRKFAETAGRCLADYGEQRPSMGDVVWNLEYCLQLQESQPSTETAL 785
Query: 76 DSMNQISELPSN---AQRISSL-EISTADESRTAMDYSQ----MSTSNAFSQLINTEGR 126
D + + LP + A+R++ L ++AD + M +S+ +T N FSQ+++ +GR
Sbjct: 786 DLDDSGAHLPRDIVVARRVAPLAPDASADAAGDDMSWSETASFTATGNVFSQIMSRDGR 844
>Os01g0769700 Similar to Resistance protein candidate (Fragment)
Length = 896
Score = 82.8 bits (203), Expect = 5e-17, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
I+D + G I P+ +K+ ET EKC+++ G++RP+MGDVLWNLEF LQ+QE+ D +I
Sbjct: 772 IVDPHLKGKIAPQCFKKFAETAEKCVSDEGIDRPSMGDVLWNLEFALQMQESAEDSGSIG 831
Query: 77 SMNQISELP---------------SNAQRISSLEISTADESRTAMDYSQMSTSNAFSQLI 121
P S+ ++ IS D+S ++D ++ S FSQ++
Sbjct: 832 CGMSDEGTPLVMPGKKDPNDPSIESSTTTTTTTSISMGDQSVASIDSDGLTPSAVFSQIM 891
Query: 122 NTEGR 126
N +GR
Sbjct: 892 NPKGR 896
>Os05g0280700 Similar to Resistance protein candidate (Fragment)
Length = 869
Score = 82.0 bits (201), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 14 LVGIIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQE----AG 69
L IID + G I P+ L+K+ ET EKCLA++GV+RP+MGDVLWNLEF LQ+QE G
Sbjct: 756 LHDIIDPLLNGKIAPDCLKKFAETAEKCLADHGVDRPSMGDVLWNLEFALQMQETFENGG 815
Query: 70 PDMSNIDSMNQISELPSNAQRISSLEISTADESRTAMDYSQMSTSNAFSQLINTEGR 126
+ + + +++ ++ +S E MD ++ S FSQL+ GR
Sbjct: 816 KTEGADSTSDSTTTSVADSMAANAAALSLISED---MDEEDIANSVVFSQLVRPTGR 869
>Os03g0333200 Similar to Resistance protein candidate (Fragment)
Length = 893
Score = 79.3 bits (194), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
I+D + G I P+ +K+ ET EKC+++ G++RP+MGDVLWNLEF LQ+QE+ + ++
Sbjct: 769 IVDPHLKGKIAPQCFKKFAETAEKCVSDQGIDRPSMGDVLWNLEFALQMQESAEESGSLG 828
Query: 77 SMNQISELP---------------SNAQRISSLEISTADESRTAMDYSQMSTSNAFSQLI 121
P S+ ++ IS ++S ++D ++ S FSQ++
Sbjct: 829 CGMSDDSTPLVIVGKKDPNDPSIESSTTTTTTTSISMGEQSVASIDSDGLTPSAVFSQIM 888
Query: 122 NTEGR 126
N +GR
Sbjct: 889 NPKGR 893
>Os05g0318600 Similar to Protein kinase (Pto kinase) (Serine/threonine protein
kinase Pto)
Length = 253
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
IID + G I P+ RK+ ET E+C+A+Y + RP+MGDVLWNLE LQLQE+ +
Sbjct: 155 IIDPHLQGEITPQCFRKFTETAEQCVADYSMNRPSMGDVLWNLEVALQLQESAEENCEET 214
Query: 77 SMNQISELPSNAQRISSLEISTADESRTAMDYSQMSTSNAFSQLINTEGR 126
++N +S S L SR+ M S FS++++ +GR
Sbjct: 215 ALNVLS---------SPLTTRLQPSSRSTMSIS--GQKAVFSEMMHPDGR 253
>Os04g0619600 Similar to Resistance protein candidate (Fragment)
Length = 844
Score = 72.0 bits (175), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 13 ALVGIIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEA 68
+L I+D R+ G ESL+K+GE EKCLA+ G RP+MG+VLW+LE+VLQL EA
Sbjct: 741 SLDAIVDPRLDGDFSSESLKKFGEIAEKCLADDGRSRPSMGEVLWHLEYVLQLHEA 796
>Os01g0253000 Similar to LpimPth3
Length = 437
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 13 ALVGIIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDM 72
AL ++D I I PE L K+ +T EKCL+E G ERPTMGDVLWNLE + Q+A
Sbjct: 311 ALPDVVDPAIRDQIAPECLAKFADTAEKCLSENGTERPTMGDVLWNLESAMHFQDAFDAA 370
Query: 73 SN--IDSMNQISELPSNAQRISSLEISTADESRTAMDYSQ-----------MSTSNAFSQ 119
+ + +++ + S+ S+ I+T S T+ + ++ FSQ
Sbjct: 371 AGRPVPALDAAAGSSSHLDDGSTASINTLATSSTSHPHEPCVDVVLEPDDVVAERATFSQ 430
Query: 120 LINTEGR 126
L+ GR
Sbjct: 431 LVQPTGR 437
>Os07g0147600 Protein kinase-like domain containing protein
Length = 849
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
IID R+ G ES+RK+ E EKCLA+ G RP++G+VLW+LE LQL + +N D
Sbjct: 745 IIDPRLEGNYTLESIRKFSEIAEKCLADEGRSRPSIGEVLWHLESALQLHQGLLQSANTD 804
Query: 77 SMNQ 80
++Q
Sbjct: 805 DLSQ 808
>Os05g0317900 Similar to Resistance protein candidate (Fragment)
Length = 846
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 13/114 (11%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
IID + G I P LR + + ++C+A+ ++RP M DVLW+LE L+LQE N +
Sbjct: 742 IIDPHLHGEISPPCLRMFADCAKQCVADRSIDRPLMSDVLWSLEAALKLQE------NAE 795
Query: 77 SMNQISELPSNAQRISSL-EISTADESRTAMDYSQMSTSNA---FSQLINTEGR 126
+ + SE ++++R L I D+ T YS MS + FS +++ +GR
Sbjct: 796 NNKKFSEATTSSKRTPDLITIMGTDKPST---YSTMSITGQKIIFSDMMHPQGR 846
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.129 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,546,653
Number of extensions: 123411
Number of successful extensions: 625
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 619
Number of HSP's successfully gapped: 15
Length of query: 126
Length of database: 17,035,801
Length adjustment: 89
Effective length of query: 37
Effective length of database: 12,388,755
Effective search space: 458383935
Effective search space used: 458383935
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 149 (62.0 bits)