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Os06g0334300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Resistance protein candidate (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0212) R2 : 0.285
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -0.843 (0.0647) R2dE : 0.273 R2E : 0.281
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0615 (0.045) R2dN8 : 0.00387 R2N8 : 0.0118
σ : 0.397
deviance : 72.59
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C
peak time of C : --
E
wheather : humidity
threshold : 72.01
memory length : 1220
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
55.06 0.349 10.3 -0.628 0.346 -0.826 0.084 -0.231 -0.0118 3.83 72 1253 -- --
55.1 0.346 10.3 -0.665 0.34 -0.848 0.154 -- -0.0222 4.1 72.7 1230 -- --
55.06 0.346 10.3 -0.627 0.344 -0.829 -- -0.246 -0.0113 3.88 72.05 1245 -- --
55.16 0.346 10.3 -0.666 0.34 -0.847 -- -- -0.0212 4.03 72.65 1232 -- --
61.07 0.364 10.3 -0.619 -- -0.91 -- -0.221 -0.00741 -- 72.01 1221 -- --
79.24 0.417 10.3 -0.499 0.495 -- 0.176 -- 0.0866 2.94 -- -- -- --
79.35 0.417 10.3 -0.503 0.496 -- -- -- 0.0855 2.92 -- -- -- --
61.14 0.364 10.4 -0.668 -- -0.935 -- -- -0.0223 -- 72.21 1216 -- --
66.59 0.38 10.3 -- 0.335 -0.729 -- -- 0.0435 3.73 73 1250 -- --
93.49 0.452 10.3 -0.482 -- -- -- -- 0.0983 -- -- -- -- --
86.01 0.434 10.3 -- 0.486 -- -- -- 0.142 2.91 -- -- -- --
72.59 0.397 10.3 -- -- -0.843 -- -- 0.0615 -- 72.01 1220 -- --
99.61 0.466 10.3 -- -- -- -- -- 0.152 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.28 radiation 40 1440 > th dose dependent sin 13 NA
2 55.29 radiation 40 1440 > th dose dependent rect. 13 20
3 55.43 radiation 20 14400 > th dose dependent rect. 16 2
17 55.50 humidity 70 14400 > th dose independent rect. 19 1
18 55.53 radiation 40 1440 > th dose dependent rect. 13 2
19 55.55 humidity 80 1440 < th dose dependent sin 14 NA
37 55.64 humidity 80 1440 < th dose dependent rect. 15 17
40 55.70 humidity 70 1440 < th dose independent sin 15 NA
42 55.74 humidity 70 14400 > th dose independent rect. 19 12
78 55.93 humidity 70 14400 < th dose independent rect. 18 2
86 55.97 humidity 70 14400 < th dose independent rect. 18 13
95 56.03 humidity 70 1440 > th dose independent sin 15 NA
96 56.03 humidity 70 1440 < th dose independent rect. 12 8
110 56.06 humidity 50 1440 > th dose dependent rect. 12 11
132 56.15 humidity 70 14400 > th dose independent rect. 19 8
137 56.18 humidity 70 14400 > th dose independent rect. 19 6
139 56.18 temperature 25 14400 > th dose dependent rect. 22 2
140 56.19 humidity 70 14400 > th dose independent rect. 19 4
148 56.23 humidity 70 14400 < th dose independent rect. 18 4
159 56.25 temperature 30 14400 < th dose independent rect. 11 1
178 56.27 humidity 70 1440 > th dose independent rect. 12 15
183 56.28 humidity 70 1440 > th dose independent rect. 12 13
189 56.29 humidity 70 1440 > th dose independent rect. 12 11
194 56.30 humidity 70 1440 > th dose independent rect. 12 8
231 56.40 humidity 90 43200 > th dose dependent rect. 9 2
245 56.41 radiation 40 1440 > th dose independent rect. 13 20
278 56.46 humidity 50 1440 > th dose dependent rect. 12 20
289 56.50 radiation 40 1440 > th dose independent rect. 13 2
316 56.53 temperature 30 14400 > th dose independent rect. 11 2
324 56.56 humidity 50 1440 > th dose dependent sin 17 NA
369 56.67 humidity 90 43200 < th dose independent rect. 10 2
417 56.77 wind 5 43200 > th dose independent rect. 11 1
446 56.81 temperature 30 14400 > th dose dependent rect. 15 3
466 56.83 humidity 80 1440 < th dose dependent rect. 16 1
489 56.90 humidity 80 43200 > th dose dependent rect. 12 1
558 56.97 wind 5 43200 < th dose independent rect. 11 1
571 57.00 humidity 90 43200 > th dose independent rect. 9 4
572 57.00 temperature 30 14400 > th dose dependent sin 13 NA
587 57.04 temperature 25 14400 < th dose independent rect. 23 4
588 57.04 temperature 25 14400 > th dose independent rect. 22 5
594 57.06 radiation 40 1440 > th dose independent sin 13 NA
619 57.09 radiation 10 1440 > th dose independent rect. 15 16
624 57.10 temperature 25 14400 > th dose independent rect. 23 3
633 57.11 radiation 1 1440 > th dose dependent rect. 13 5
636 57.12 radiation 30 14400 < th dose independent rect. 15 11
639 57.12 wind 5 43200 < th dose dependent rect. 2 2
647 57.13 radiation 30 14400 < th dose independent rect. 15 8
651 57.13 wind 1 43200 > th dose dependent rect. 2 2
669 57.14 radiation 30 14400 < th dose independent rect. 15 3
703 57.17 temperature 30 14400 < th dose independent rect. 17 10
710 57.18 temperature 30 14400 > th dose independent rect. 17 2
717 57.18 temperature 30 14400 < th dose independent rect. 17 8
733 57.19 temperature 30 14400 < th dose independent rect. 17 2
735 57.19 temperature 30 14400 < th dose independent rect. 17 5
743 57.19 radiation 40 14400 > th dose dependent rect. 14 2
781 57.22 radiation 40 1440 < th dose independent rect. 14 1
804 57.26 temperature 25 14400 > th dose independent rect. 19 11
847 57.30 wind 5 43200 > th dose dependent rect. 11 1
886 57.35 temperature 25 14400 < th dose independent rect. 24 1
895 57.38 radiation 30 14400 > th dose independent rect. 15 2
905 57.38 temperature 25 14400 < th dose independent rect. 20 10
917 57.39 radiation 10 1440 > th dose independent sin 14 NA
970 57.45 temperature 30 14400 < th dose independent rect. 11 8
991 57.46 temperature 30 14400 > th dose independent rect. 11 8