Os03g0333200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Resistance protein candidate (Fragment).
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Os03g0333200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Resistance protein candidate (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.95 | 0.248 | 11.5 | 0.48 | 0.671 | -0.644 | -0.00345 | 0.0417 | 0.149 | 1.59 | 79.83 | 1426 | -- | -- |
| 27.94 | 0.246 | 11.5 | 0.478 | 0.686 | -0.637 | -0.00524 | -- | 0.148 | 1.61 | 79.62 | 1396 | -- | -- |
| 27.94 | 0.246 | 11.5 | 0.486 | 0.692 | -0.639 | -- | 0.0475 | 0.148 | 1.62 | 79.99 | 1379 | -- | -- |
| 27.93 | 0.246 | 11.5 | 0.479 | 0.694 | -0.633 | -- | -- | 0.149 | 1.61 | 79.49 | 1379 | -- | -- |
| 39.19 | 0.293 | 11.5 | 0.492 | -- | -0.427 | -- | -0.217 | 0.131 | -- | 79.99 | 1379 | -- | -- |
| 32.86 | 0.269 | 11.5 | 0.457 | 0.667 | -- | -0.0714 | -- | 0.111 | 1.51 | -- | -- | -- | -- |
| 32.88 | 0.269 | 11.5 | 0.459 | 0.667 | -- | -- | -- | 0.111 | 1.5 | -- | -- | -- | -- |
| 39.5 | 0.294 | 11.5 | 0.499 | -- | -0.427 | -- | -- | 0.133 | -- | 79.99 | 1379 | -- | -- |
| 33.87 | 0.271 | 11.5 | -- | 0.662 | -0.616 | -- | -- | 0.094 | 1.58 | 80.68 | 1464 | -- | -- |
| 60.13 | 0.362 | 11.5 | 0.486 | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
| 38.43 | 0.29 | 11.5 | -- | 0.675 | -- | -- | -- | 0.0602 | 1.52 | -- | -- | -- | -- |
| 46.07 | 0.317 | 11.5 | -- | -- | -0.423 | -- | -- | 0.0772 | -- | 79.99 | 1379 | -- | -- |
| 66.34 | 0.38 | 11.5 | -- | -- | -- | -- | -- | 0.0718 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.19 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 2 | 27.33 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 5 | 27.60 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 6 | 27.68 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 22 | 22 |
| 10 | 27.79 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 22 |
| 12 | 27.83 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 14 | 27.84 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 15 | 27.85 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 19 | 27.87 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 22 | 19 |
| 22 | 27.87 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 34 | 27.91 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 43 | 27.93 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 47 | 27.95 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 58 | 27.96 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 22 |
| 68 | 27.98 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 80 | 27.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 91 | 28.01 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 10 |
| 107 | 28.02 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 136 | 28.06 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 143 | 28.07 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 144 | 28.08 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 148 | 28.08 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 155 | 28.09 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 18 | 6 |
| 170 | 28.11 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 192 | 28.14 | humidity | 80.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 194 | 28.14 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 205 | 28.15 | humidity | 80.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 333 | 28.30 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 349 | 28.32 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 380 | 28.37 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 420 | 28.43 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 527 | 28.60 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 535 | 28.60 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 24 | 21 |
| 536 | 28.60 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 18 | 22 |
| 594 | 28.67 | humidity | 70.0 | 1440 | > th | dose dependent | no | NA | NA |
| 602 | 28.68 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 661 | 28.75 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 673 | 28.77 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 697 | 28.79 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 716 | 28.81 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 755 | 28.85 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 756 | 28.85 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 801 | 28.88 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 1 | 15 |
| 810 | 28.89 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 18 | 6 |
| 823 | 28.90 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 18 | 4 |
| 914 | 28.97 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 916 | 28.97 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 10 |
| 939 | 28.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 947 | 29.00 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 983 | 29.02 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 9 | 16 |