Os01g0769700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Resistance protein candidate (Fragment).
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Os01g0769700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Resistance protein candidate (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 364.29 | 0.897 | 8.91 | -2.87 | 1.86 | 1.8 | -1.92 | 0.0175 | -0.872 | 13.4 | 70.37 | 1253 | -- | -- |
| 360.53 | 0.884 | 8.91 | -2.8 | 1.89 | 1.89 | -2.07 | -- | -0.853 | 13.4 | 72 | 1255 | -- | -- |
| 375.14 | 0.902 | 8.91 | -2.85 | 1.83 | 1.85 | -- | 0.67 | -0.875 | 13.3 | 72.2 | 1264 | -- | -- |
| 376.26 | 0.903 | 8.91 | -2.91 | 1.85 | 1.91 | -- | -- | -0.884 | 13.3 | 72.08 | 1263 | -- | -- |
| 489.74 | 1.04 | 8.89 | -2.73 | -- | 1.16 | -- | -1.69 | -0.667 | -- | 73 | 1615 | -- | -- |
| 481.57 | 1.03 | 8.86 | -2.46 | 1.47 | -- | -2.32 | -- | -0.621 | 13.5 | -- | -- | -- | -- |
| 503.08 | 1.05 | 8.86 | -2.54 | 1.47 | -- | -- | -- | -0.635 | 13.3 | -- | -- | -- | -- |
| 481.99 | 1.02 | 8.94 | -2.93 | -- | 2.23 | -- | -- | -0.907 | -- | 72.15 | 1619 | -- | -- |
| 597.99 | 1.14 | 8.89 | -- | 1.9 | 1.69 | -- | -- | -0.642 | 13.3 | 74.93 | 2672 | -- | -- |
| 636.45 | 1.18 | 8.88 | -2.6 | -- | -- | -- | -- | -0.666 | -- | -- | -- | -- | -- |
| 672.95 | 1.21 | 8.8 | -- | 1.52 | -- | -- | -- | -0.352 | 13.4 | -- | -- | -- | -- |
| 637.3 | 1.18 | 8.94 | -- | -- | 2.49 | -- | -- | -0.963 | -- | 66 | 29277 | -- | -- |
| 814.28 | 1.33 | 8.82 | -- | -- | -- | -- | -- | -0.378 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 360.34 | humidity | 70 | 1440 | < th | dose independent | sin | 14 | NA |
| 3 | 360.51 | radiation | 40 | 1440 | > th | dose dependent | sin | 13 | NA |
| 4 | 361.02 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 16 |
| 7 | 361.27 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 19 | 361.89 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 22 | 362.84 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 23 | 362.86 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 36 | 363.43 | radiation | 40 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 37 | 363.51 | radiation | 40 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 38 | 363.62 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 73 | 363.72 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 74 | 363.85 | humidity | 70 | 1440 | > th | dose independent | sin | 14 | NA |
| 76 | 363.92 | radiation | 40 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 97 | 364.56 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 98 | 364.61 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 103 | 364.68 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 124 | 365.38 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 126 | 365.71 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 128 | 365.82 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 135 | 365.82 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 152 | 365.93 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 153 | 365.93 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 154 | 365.95 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 158 | 366.07 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 159 | 366.08 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 162 | 366.11 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 163 | 366.11 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 12 |
| 164 | 366.11 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 14 |
| 178 | 367.31 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 9 |
| 183 | 367.49 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 7 |
| 187 | 367.58 | humidity | 60 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 206 | 367.63 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 207 | 367.64 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 208 | 367.65 | humidity | 80 | 1440 | < th | dose dependent | sin | 18 | NA |
| 210 | 367.72 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 223 | 367.75 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 15 |
| 227 | 367.77 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 228 | 367.79 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 229 | 367.80 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 264 | 368.00 | humidity | 60 | 1440 | > th | dose independent | rect. | 12 | 20 |
| 265 | 368.00 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 266 | 368.02 | humidity | 60 | 1440 | > th | dose independent | rect. | 12 | 9 |
| 280 | 368.07 | humidity | 60 | 1440 | > th | dose independent | rect. | 12 | 16 |
| 296 | 368.12 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 6 |
| 326 | 368.32 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 339 | 368.43 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 14 |
| 340 | 368.44 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 346 | 368.45 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 347 | 368.45 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 400 | 368.67 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 437 | 368.93 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 20 |
| 449 | 368.99 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 465 | 369.09 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 516 | 369.23 | temperature | 30 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 582 | 369.42 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 605 | 369.64 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 644 | 370.07 | humidity | 60 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 696 | 370.44 | temperature | 30 | 14400 | > th | dose dependent | sin | 13 | NA |
| 698 | 370.44 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 745 | 370.85 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 746 | 370.85 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 804 | 370.89 | radiation | 40 | 1440 | > th | dose independent | sin | 13 | NA |
| 868 | 371.32 | humidity | 50 | 1440 | > th | dose dependent | sin | 23 | NA |
| 886 | 371.37 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 17 |
| 887 | 371.37 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 891 | 371.38 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 893 | 371.38 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 895 | 371.38 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 896 | 371.38 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 903 | 371.39 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 923 | 371.41 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 953 | 371.49 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 1 |