Os10g0534500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Resistance protein candidate (Fragment).
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Os10g0534500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Resistance protein candidate (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.97 | 0.373 | 10 | 0.154 | 1.38 | -0.674 | 0.24 | 0.695 | -0.055 | 16.4 | 77.02 | 15542 | -- | -- |
| 63.81 | 0.372 | 10 | 0.313 | 1.37 | -0.656 | 0.268 | -- | 0.00953 | 16.4 | 79.06 | 15605 | -- | -- |
| 62.83 | 0.369 | 10 | 0.114 | 1.38 | -0.711 | -- | 0.683 | -0.0647 | 16.4 | 82.01 | 15615 | -- | -- |
| 63.72 | 0.372 | 10 | 0.311 | 1.38 | -0.644 | -- | -- | -0.0168 | 16.4 | 81.9 | 15790 | -- | -- |
| 136.72 | 0.548 | 10 | 0.376 | -- | -0.765 | -- | -0.294 | -0.0157 | -- | 82.01 | 15615 | -- | -- |
| 73.95 | 0.403 | 9.98 | 0.311 | 1.34 | -- | 0.278 | -- | 0.138 | 16.5 | -- | -- | -- | -- |
| 74.16 | 0.403 | 9.98 | 0.314 | 1.35 | -- | -- | -- | 0.14 | 16.5 | -- | -- | -- | -- |
| 129.72 | 0.533 | 9.99 | 0.312 | -- | -0.809 | -- | -- | 0.0222 | -- | 74.54 | 13377 | -- | -- |
| 66.13 | 0.379 | 10 | -- | 1.39 | -0.64 | -- | -- | -0.0439 | 16.4 | 82.74 | 15788 | -- | -- |
| 171.04 | 0.611 | 9.97 | 0.261 | -- | -- | -- | -- | 0.104 | -- | -- | -- | -- | -- |
| 76.75 | 0.41 | 9.98 | -- | 1.34 | -- | -- | -- | 0.105 | 16.5 | -- | -- | -- | -- |
| 132.28 | 0.537 | 9.99 | -- | -- | -0.8 | -- | -- | -0.0116 | -- | 74.54 | 13377 | -- | -- |
| 172.84 | 0.614 | 9.97 | -- | -- | -- | -- | -- | 0.0752 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.60 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 2 | 60.76 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 60.78 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 4 | 60.78 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 5 |
| 10 | 60.96 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 58 | 61.84 | humidity | 90 | 4320 | > th | dose independent | rect. | 6 | 12 |
| 61 | 61.85 | humidity | 90 | 4320 | < th | dose independent | rect. | 6 | 12 |
| 90 | 62.05 | humidity | 90 | 14400 | > th | dose independent | sin | 4 | NA |
| 130 | 62.28 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 21 |
| 138 | 62.30 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 22 |
| 150 | 62.33 | humidity | 90 | 14400 | < th | dose independent | sin | 4 | NA |
| 159 | 62.35 | humidity | 90 | 14400 | > th | dose independent | rect. | 13 | 21 |
| 177 | 62.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 183 | 62.39 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 193 | 62.40 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 22 |
| 197 | 62.41 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 16 |
| 207 | 62.41 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 235 | 62.43 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 257 | 62.44 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 20 |
| 302 | 62.49 | humidity | 90 | 14400 | > th | dose dependent | sin | 2 | NA |
| 370 | 62.58 | humidity | 90 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 418 | 62.63 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 20 |
| 422 | 62.64 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 17 |
| 471 | 62.67 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 23 |
| 481 | 62.69 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 511 | 62.71 | humidity | 90 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 555 | 62.74 | radiation | 30 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 677 | 62.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 778 | 62.96 | humidity | 80 | 14400 | > th | dose dependent | rect. | 14 | 22 |
| 828 | 63.01 | humidity | 80 | 14400 | > th | dose dependent | no | NA | NA |
| 842 | 63.02 | humidity | 90 | 14400 | > th | dose independent | rect. | 14 | 11 |
| 904 | 63.05 | humidity | 80 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 907 | 63.06 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 930 | 63.08 | humidity | 90 | 14400 | > th | dose independent | sin | 16 | NA |
| 948 | 63.09 | humidity | 80 | 4320 | > th | dose dependent | rect. | 10 | 1 |