Os05g0317900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Resistance protein candidate (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os05g0317900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Resistance protein candidate (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 298.83 | 0.812 | 9.53 | 0.289 | 1.27 | -5.23 | 2.28 | 1.03 | 0.293 | 6.46 | 2.069 | 82 | 8.1 | -- |
| 301.05 | 0.808 | 9.54 | 0.334 | 1.2 | -5.4 | 2.51 | -- | 0.312 | 5.88 | 2.382 | 78 | 8.09 | -- |
| 310.67 | 0.821 | 9.52 | 0.359 | 1.26 | -5.25 | -- | 0.769 | 0.305 | 6.31 | 2.463 | 81 | 8.04 | -- |
| 308.84 | 0.818 | 9.52 | 0.345 | 1.23 | -5.04 | -- | -- | 0.341 | 7 | 1.892 | 66 | 7.93 | -- |
| 341.81 | 0.861 | 9.55 | 0.348 | -- | -5.55 | -- | 0.732 | 0.393 | -- | 2.021 | 51 | 8.5 | -- |
| 544.19 | 1.09 | 9.37 | 0.56 | 5.85 | -- | -0.587 | -- | 0.508 | 10.8 | -- | -- | -- | -- |
| 545.62 | 1.09 | 9.37 | 0.536 | 5.85 | -- | -- | -- | 0.506 | 10.8 | -- | -- | -- | -- |
| 342.36 | 0.862 | 9.54 | 0.356 | -- | -5.6 | -- | -- | 0.374 | -- | 2.52 | 66 | 8.76 | -- |
| 311.92 | 0.823 | 9.53 | -- | 1.22 | -5.06 | -- | -- | 0.305 | 6.96 | 1.824 | 66 | 7.94 | -- |
| 2661.39 | 2.41 | 9.52 | 0.419 | -- | -- | -- | -- | 0.472 | -- | -- | -- | -- | -- |
| 553.19 | 1.1 | 9.39 | -- | 5.85 | -- | -- | -- | 0.446 | 10.7 | -- | -- | -- | -- |
| 345.32 | 0.865 | 9.55 | -- | -- | -5.61 | -- | -- | 0.33 | -- | 2.424 | 66 | 8.78 | -- |
| 2666.02 | 2.41 | 9.53 | -- | -- | -- | -- | -- | 0.425 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 299.91 | radiation | 1.0 | 90 | < th | dose independent | sin | 14 | NA |
| 3 | 308.87 | radiation | 1.0 | 90 | > th | dose independent | sin | 14 | NA |
| 4 | 310.04 | radiation | 1.0 | 90 | < th | dose dependent | sin | 14 | NA |
| 10 | 319.78 | radiation | 1.0 | 90 | > th | dose independent | rect. | 14 | 16 |
| 18 | 330.68 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 19 | 330.76 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 27 | 335.94 | radiation | 1.0 | 90 | < th | dose independent | rect. | 16 | 11 |
| 34 | 341.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 36 | 341.25 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 17 |
| 41 | 341.87 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 44 | 342.85 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 50 | 345.66 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 58 | 348.79 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 62 | 349.58 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 17 |
| 69 | 350.38 | radiation | 1.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 70 | 350.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 71 | 351.16 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 77 | 353.73 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 86 | 356.09 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 89 | 356.33 | radiation | 1.0 | 90 | > th | dose independent | rect. | 14 | 5 |
| 108 | 358.68 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 111 | 358.86 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 14 | 17 |
| 113 | 359.30 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 121 | 360.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 14 |
| 122 | 360.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 14 |
| 123 | 360.40 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 7 |
| 126 | 360.97 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 14 | 17 |
| 172 | 364.20 | humidity | 60.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 188 | 364.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 193 | 365.35 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 197 | 365.66 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 15 |
| 233 | 369.43 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 21 |
| 297 | 373.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 298 | 373.74 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 299 | 373.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 14 |
| 300 | 373.74 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 14 |
| 304 | 373.90 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 4 |
| 318 | 374.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 14 |
| 322 | 375.10 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 348 | 376.59 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 351 | 376.64 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 362 | 377.31 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 364 | 377.37 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 366 | 377.39 | temperature | 10.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 368 | 377.39 | radiation | 20.0 | 90 | < th | dose independent | rect. | 18 | 9 |
| 374 | 377.42 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 381 | 377.80 | wind | 9.0 | 90 | < th | dose independent | rect. | 18 | 9 |
| 394 | 378.23 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 12 |
| 418 | 379.28 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 423 | 379.61 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 10 |
| 424 | 379.66 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 432 | 379.93 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 438 | 380.27 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 10 |
| 443 | 380.39 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 3 |
| 444 | 380.39 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 3 |
| 446 | 380.49 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 3 |
| 447 | 380.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 18 |
| 448 | 380.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 453 | 380.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 455 | 380.71 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 3 |
| 457 | 380.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 470 | 381.17 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 483 | 381.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 505 | 381.88 | humidity | 90.0 | 90 | < th | dose independent | rect. | 14 | 4 |
| 532 | 382.61 | humidity | 90.0 | 10 | < th | dose independent | rect. | 14 | 5 |
| 538 | 382.65 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 542 | 382.77 | wind | 5.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 553 | 382.96 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 557 | 383.02 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 573 | 383.15 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 590 | 383.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 597 | 383.44 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 598 | 383.45 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 18 | 9 |
| 599 | 383.45 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 18 | 9 |
| 605 | 383.50 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 21 |
| 606 | 383.52 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 629 | 383.77 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 636 | 383.81 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 638 | 383.85 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 642 | 383.87 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 643 | 383.87 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 652 | 383.90 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 724 | 384.26 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 726 | 384.26 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 825 | 384.97 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 851 | 385.18 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 13 | 3 |
| 883 | 385.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 5 |
| 884 | 385.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 900 | 385.72 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 901 | 385.73 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 915 | 386.00 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 946 | 386.52 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 950 | 386.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 951 | 386.58 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 15 |
| 964 | 386.73 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 971 | 386.79 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 981 | 386.84 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 999 | 387.01 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 5 |