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Os01g0155500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Resistance protein candidate (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0214) R2 : 0.659
β1 : 1.37 (0.0782) R2dD : 0.239 R2D : 0.196
β2 : 1.23 (0.0508) R2dC : 0.441 R2C : 0.424
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.197 (0.0456) R2dN8 : 0.0186 R2N8 : -0.0107
σ : 0.402
deviance : 73.57
__
_____
C
peak time of C : 11.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
67.12 0.385 11.6 1.25 1.21 -0.00987 0.0946 2.79 0.112 11.3 5.1 3930 -- --
71.28 0.393 11.6 1.29 1.22 -0.342 0.0114 -- 0.173 11.3 5.601 4168 -- --
67.14 0.382 11.6 1.25 1.21 -0.0277 -- 2.7 0.111 11.3 5.066 4004 -- --
71.16 0.393 11.6 1.25 1.22 -0.382 -- -- 0.16 11.3 5.6 4176 -- --
153.75 0.578 11.7 1 -- -0.498 -- 2.83 -0.0318 -- 4.488 3738 -- --
73.4 0.402 11.6 1.38 1.23 -- -0.2 -- 0.197 11.3 -- -- -- --
73.57 0.402 11.6 1.37 1.23 -- -- -- 0.197 11.3 -- -- -- --
145.14 0.561 11.6 0.901 -- -0.88 -- -- 0.232 -- 3.3 790 -- --
77.56 0.41 11.6 -- 1.28 -1.12 -- -- -0.177 11.4 7.408 47520 -- --
168.23 0.606 11.6 1.34 -- -- -- -- 0.185 -- -- -- -- --
123.13 0.519 11.6 -- 1.22 -- -- -- 0.0439 11.3 -- -- -- --
172.33 0.611 11.6 -- -- -1.28 -- -- 0.141 -- 3.215 845 -- --
215.59 0.685 11.6 -- -- -- -- -- 0.036 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.06 wind 1.0 270 > th dose independent rect. 20 8
3 62.48 humidity 50.0 270 > th dose independent rect. 15 17
4 62.48 wind 1.0 270 > th dose independent rect. 9 18
5 62.83 wind 9.0 270 < th dose independent rect. 15 17
6 62.85 radiation 30.0 270 < th dose independent rect. 15 17
9 63.08 wind 1.0 270 > th dose independent rect. 8 7
10 63.14 precipitation 0.1 270 < th dose independent rect. 8 7
11 63.14 precipitation 0.1 270 < th dose dependent rect. 8 7
12 63.15 temperature 10.0 270 > th dose independent rect. 8 7
13 63.15 atmosphere 1015.0 270 < th dose independent rect. 8 7
14 63.15 temperature 10.0 270 > th dose independent rect. 15 17
15 63.18 wind 9.0 270 < th dose independent rect. 4 15
18 63.23 temperature 10.0 270 > th dose dependent rect. 2 7
19 63.24 precipitation 0.1 270 < th dose independent rect. 15 17
20 63.24 precipitation 0.1 270 < th dose dependent rect. 15 17
24 63.42 radiation 1.0 30 > th dose independent rect. 11 8
36 63.42 temperature 10.0 30 > th dose dependent rect. 3 8
40 63.46 atmosphere 995.0 270 > th dose independent rect. 8 7
47 63.55 humidity 50.0 270 > th dose independent rect. 8 7
48 63.58 wind 9.0 270 < th dose independent rect. 8 7
55 63.65 radiation 10.0 10 < th dose independent rect. 20 10
56 63.69 humidity 60.0 30 > th dose independent rect. 16 19
61 63.78 precipitation 0.1 270 < th dose independent rect. 19 9
62 63.78 precipitation 0.1 270 < th dose independent rect. 4 15
63 63.78 precipitation 0.1 270 < th dose dependent rect. 19 9
64 63.78 precipitation 0.1 270 < th dose dependent rect. 4 15
70 63.81 humidity 60.0 90 > th dose independent rect. 17 17
75 63.85 atmosphere 995.0 270 > th dose independent rect. 15 17
76 63.85 radiation 40.0 270 < th dose dependent rect. 15 17
85 63.96 temperature 15.0 270 > th dose independent rect. 4 15
94 64.03 temperature 10.0 270 > th dose independent rect. 19 9
95 64.03 temperature 30.0 270 < th dose independent rect. 19 9
96 64.03 humidity 50.0 270 > th dose independent rect. 19 9
97 64.03 atmosphere 995.0 270 > th dose independent rect. 19 9
98 64.03 radiation 1.0 270 < th dose independent rect. 19 9
104 64.03 atmosphere 1015.0 270 < th dose independent rect. 4 15
105 64.03 radiation 1.0 270 < th dose dependent rect. 19 9
116 64.06 wind 9.0 270 < th dose independent rect. 12 23
132 64.09 wind 9.0 4320 < th dose independent rect. 24 6
147 64.17 wind 7.0 90 < th dose independent rect. 17 18
148 64.18 wind 9.0 270 < th dose independent rect. 19 9
151 64.21 radiation 1.0 270 > th dose independent rect. 8 7
176 64.25 temperature 10.0 1440 > th dose independent rect. 21 9
179 64.25 temperature 30.0 1440 < th dose independent rect. 21 9
183 64.25 humidity 50.0 1440 > th dose independent rect. 21 9
189 64.25 atmosphere 995.0 1440 > th dose independent rect. 21 9
190 64.25 radiation 20.0 1440 < th dose independent rect. 21 9
199 64.25 temperature 10.0 1440 > th dose independent rect. 6 15
211 64.28 radiation 1.0 14400 < th dose dependent rect. 19 2
244 64.33 wind 9.0 90 < th dose dependent rect. 17 18
248 64.36 temperature 20.0 270 > th dose independent rect. 3 5
252 64.38 radiation 40.0 270 < th dose independent rect. 2 7
263 64.41 wind 9.0 270 < th dose independent rect. 2 7
264 64.41 temperature 10.0 270 > th dose independent rect. 2 7
266 64.41 humidity 50.0 270 > th dose independent rect. 2 7
267 64.41 atmosphere 995.0 270 > th dose independent rect. 2 7
268 64.41 atmosphere 1015.0 270 < th dose independent rect. 2 7
269 64.41 temperature 10.0 270 > th dose independent rect. 9 17
270 64.42 temperature 10.0 1440 > th dose independent rect. 12 7
275 64.42 temperature 10.0 1440 > th dose independent rect. 19 17
278 64.42 atmosphere 995.0 1440 > th dose independent rect. 19 17
279 64.42 radiation 30.0 10 < th dose independent rect. 16 19
293 64.45 temperature 30.0 270 < th dose independent rect. 15 17
324 64.51 wind 1.0 30 > th dose independent rect. 3 8
326 64.53 atmosphere 995.0 30 > th dose independent rect. 17 18
333 64.56 precipitation 0.1 270 < th dose independent rect. 2 7
335 64.56 precipitation 0.1 270 < th dose dependent rect. 2 7
345 64.58 atmosphere 1015.0 270 < th dose independent rect. 15 17
365 64.60 wind 9.0 90 < th dose dependent rect. 5 15
385 64.65 radiation 20.0 10 < th dose dependent rect. 20 10
388 64.67 humidity 50.0 270 > th dose independent rect. 11 1
390 64.67 temperature 30.0 270 < th dose independent rect. 2 7
392 64.68 wind 1.0 270 > th dose independent rect. 11 1
393 64.68 temperature 10.0 1440 > th dose independent rect. 4 8
396 64.68 atmosphere 995.0 1440 > th dose independent rect. 4 8
397 64.68 temperature 10.0 1440 > th dose independent rect. 12 16
400 64.68 precipitation 0.1 270 < th dose independent rect. 9 17
401 64.68 precipitation 0.1 270 < th dose dependent rect. 9 17
404 64.70 temperature 10.0 1440 > th dose independent rect. 6 6
407 64.70 atmosphere 995.0 1440 > th dose independent rect. 6 6
409 64.70 temperature 10.0 1440 > th dose independent rect. 12 18
414 64.71 temperature 30.0 30 < th dose independent rect. 16 19
415 64.72 temperature 10.0 270 > th dose independent rect. 11 1
416 64.72 atmosphere 995.0 270 > th dose independent rect. 11 1
417 64.72 atmosphere 1015.0 270 < th dose independent rect. 11 1
418 64.72 precipitation 0.1 270 < th dose independent rect. 11 1
422 64.72 temperature 10.0 270 > th dose independent rect. 12 23
423 64.72 precipitation 0.1 270 < th dose dependent rect. 11 1
434 64.75 wind 9.0 270 < th dose dependent rect. 15 5
442 64.78 radiation 1.0 270 > th dose independent rect. 11 1
448 64.78 temperature 10.0 270 > th dose dependent rect. 20 7
450 64.79 temperature 10.0 10 > th dose independent rect. 11 5
452 64.79 atmosphere 1015.0 10 < th dose independent rect. 11 5
453 64.79 precipitation 0.1 10 < th dose independent rect. 11 5
460 64.79 wind 9.0 10 < th dose independent rect. 6 14
461 64.79 temperature 10.0 30 > th dose independent rect. 17 18
464 64.79 precipitation 0.1 10 < th dose dependent rect. 11 5
467 64.80 humidity 50.0 270 > th dose independent rect. 3 16
475 64.81 radiation 10.0 30 < th dose dependent rect. 6 14
498 64.85 temperature 15.0 30 > th dose dependent rect. 5 6
500 64.86 wind 7.0 270 < th dose independent rect. 15 5
505 64.87 atmosphere 995.0 10 > th dose independent rect. 6 14
532 64.92 humidity 50.0 30 > th dose independent rect. 11 5
560 64.94 atmosphere 995.0 270 > th dose independent rect. 3 17
572 64.96 temperature 10.0 90 > th dose independent rect. 11 16
587 65.00 wind 1.0 10 > th dose independent rect. 11 5
590 65.00 atmosphere 995.0 270 > th dose independent rect. 9 17
611 65.02 radiation 1.0 30 < th dose dependent rect. 16 4
614 65.03 atmosphere 995.0 90 > th dose independent rect. 5 15
618 65.03 humidity 50.0 270 > th dose dependent rect. 3 6
622 65.04 atmosphere 1015.0 10 < th dose independent rect. 16 19
627 65.05 temperature 30.0 90 < th dose independent rect. 17 16
685 65.11 precipitation 0.1 270 < th dose independent rect. 12 23
689 65.11 precipitation 0.1 270 < th dose dependent rect. 12 23
690 65.12 wind 9.0 30 < th dose independent rect. 11 6
692 65.12 precipitation 0.1 10 < th dose independent rect. 6 14
695 65.12 precipitation 0.1 10 < th dose dependent rect. 6 14
701 65.13 radiation 40.0 10 < th dose dependent rect. 16 19
713 65.15 atmosphere 995.0 10 > th dose independent rect. 11 5
773 65.22 temperature 10.0 10 > th dose independent rect. 20 10
774 65.22 temperature 30.0 10 < th dose independent rect. 20 10
775 65.22 humidity 50.0 10 > th dose independent rect. 20 10
778 65.22 atmosphere 995.0 10 > th dose independent rect. 20 10
782 65.22 temperature 10.0 10 > th dose independent rect. 6 14
784 65.22 atmosphere 1015.0 10 < th dose independent rect. 6 14
787 65.23 radiation 40.0 270 < th dose independent rect. 14 6
788 65.23 precipitation 0.1 10 < th dose independent rect. 11 16
791 65.23 precipitation 0.1 10 < th dose dependent rect. 11 16
799 65.24 wind 9.0 90 < th dose dependent rect. 5 17
804 65.25 precipitation 0.1 270 < th dose independent rect. 20 19
808 65.25 precipitation 0.1 270 < th dose dependent rect. 20 19
814 65.27 wind 9.0 270 < th dose independent rect. 11 1
815 65.27 radiation 1.0 270 > th dose independent rect. 15 17
817 65.28 precipitation 0.1 270 < th dose independent rect. 15 5
821 65.28 atmosphere 1015.0 270 < th dose dependent rect. 15 5
822 65.28 precipitation 0.1 270 < th dose dependent rect. 15 5
853 65.31 precipitation 0.1 10 < th dose independent rect. 20 10
855 65.31 wind 9.0 270 < th dose independent rect. 9 17
859 65.31 precipitation 0.1 10 < th dose dependent rect. 20 10
861 65.32 humidity 50.0 270 > th dose independent rect. 15 5
863 65.32 wind 9.0 10 < th dose independent rect. 20 10
883 65.35 wind 9.0 270 < th dose independent rect. 14 8
901 65.36 wind 9.0 90 < th dose dependent rect. 5 6
910 65.38 wind 1.0 270 > th dose independent rect. 20 19
922 65.39 precipitation 0.1 270 < th dose independent rect. 22 16
926 65.39 precipitation 0.1 270 < th dose dependent rect. 22 16
957 65.42 wind 9.0 270 < th dose dependent rect. 3 6
963 65.44 temperature 10.0 270 > th dose independent rect. 15 5
964 65.44 atmosphere 1015.0 270 < th dose independent rect. 15 5
971 65.44 temperature 10.0 270 > th dose independent rect. 20 19
983 65.46 temperature 15.0 90 > th dose independent rect. 5 6