Os03g0281500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Resistance protein candidate (Fragment).
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Os03g0281500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Resistance protein candidate (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.09 | 0.428 | 9.9 | 1.46 | 1.22 | 0.714 | 1.7 | -0.474 | -0.0253 | 17.6 | 1012 | 4929 | -- | -- |
| 83.67 | 0.426 | 9.91 | 1.38 | 1.22 | 0.736 | 1.67 | -- | -0.047 | 17.6 | 1012 | 5015 | -- | -- |
| 90.12 | 0.442 | 9.9 | 1.44 | 1.23 | 0.702 | -- | -0.383 | -0.0253 | 17.6 | 1012 | 4944 | -- | -- |
| 90.49 | 0.443 | 9.9 | 1.35 | 1.23 | 0.712 | -- | -- | -0.0411 | 17.6 | 1012 | 4959 | -- | -- |
| 167.98 | 0.604 | 9.87 | 1.4 | -- | 0.752 | -- | -0.284 | -0.0271 | -- | 1011 | 4376 | -- | -- |
| 96.43 | 0.46 | 9.94 | 1.17 | 1.24 | -- | 1.59 | -- | -0.175 | 17.6 | -- | -- | -- | -- |
| 102.63 | 0.474 | 9.93 | 1.16 | 1.25 | -- | -- | -- | -0.169 | 17.6 | -- | -- | -- | -- |
| 168.12 | 0.604 | 9.88 | 1.32 | -- | 0.724 | -- | -- | -0.0556 | -- | 1010 | 4311 | -- | -- |
| 132.24 | 0.536 | 9.95 | -- | 1.21 | 0.602 | -- | -- | -0.243 | 17.7 | 1014 | 4048 | -- | -- |
| 183.22 | 0.632 | 9.91 | 1.12 | -- | -- | -- | -- | -0.199 | -- | -- | -- | -- | -- |
| 138.35 | 0.55 | 9.96 | -- | 1.23 | -- | -- | -- | -0.298 | 17.6 | -- | -- | -- | -- |
| 207.18 | 0.67 | 9.93 | -- | -- | 0.742 | -- | -- | -0.262 | -- | 1014 | 4126 | -- | -- |
| 216.54 | 0.687 | 9.94 | -- | -- | -- | -- | -- | -0.323 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.75 | wind | 5.0 | 90 | > th | dose dependent | rect. | 2 | 6 |
| 2 | 77.87 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 4 | 78.14 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 18 | 78.14 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 32 | 78.18 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 33 | 78.18 | wind | 5.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 37 | 78.32 | wind | 5.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 65 | 81.02 | wind | 5.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 69 | 81.02 | wind | 5.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 79 | 81.16 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 80 | 81.47 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 87 | 82.05 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 93 | 82.46 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 94 | 82.46 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 109 | 82.86 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 110 | 82.89 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 13 | 17 |
| 114 | 82.92 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 125 | 82.94 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 129 | 82.99 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 134 | 83.05 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 139 | 83.09 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 156 | 83.20 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 9 |
| 174 | 83.41 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 187 | 83.44 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 9 |
| 222 | 83.48 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 16 |
| 246 | 83.52 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 252 | 83.52 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 9 |
| 259 | 83.53 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 268 | 83.54 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 19 |
| 280 | 83.56 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 16 |
| 305 | 83.60 | radiation | 1.0 | 1440 | > th | dose independent | sin | 17 | NA |
| 338 | 83.63 | radiation | 1.0 | 1440 | < th | dose independent | sin | 17 | NA |
| 359 | 83.66 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 361 | 83.66 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 376 | 83.67 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 12 |
| 382 | 83.68 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 18 | NA |
| 383 | 83.68 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 386 | 83.69 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 492 | 83.87 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 501 | 83.88 | atmosphere | 1010.0 | 4320 | > th | dose dependent | sin | 2 | NA |
| 502 | 83.88 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 507 | 83.89 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 515 | 83.91 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 558 | 83.99 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 590 | 84.03 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 3 | 8 |
| 603 | 84.05 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 604 | 84.05 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 605 | 84.05 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 629 | 84.07 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 631 | 84.07 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 11 | 3 |
| 634 | 84.08 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 659 | 84.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 766 | 84.19 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 20 | 13 |
| 771 | 84.20 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 820 | 84.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 825 | 84.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 871 | 84.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 884 | 84.31 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 17 | 22 |
| 887 | 84.32 | atmosphere | 1010.0 | 4320 | > th | dose dependent | no | NA | NA |
| 906 | 84.33 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 914 | 84.35 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 915 | 84.35 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 927 | 84.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 933 | 84.36 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 8 | 23 |
| 936 | 84.37 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 964 | 84.39 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 977 | 84.40 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 7 | 5 |
| 988 | 84.41 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 989 | 84.41 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 991 | 84.41 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |