Os04g0619600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Resistance protein candidate (Fragment).
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Os04g0619600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Resistance protein candidate (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.3 | 0.287 | 7.83 | 0.825 | 0.891 | 0.871 | -0.384 | 0.0193 | -0.0416 | 20.8 | 23.34 | 839 | -- | -- |
| 37.29 | 0.284 | 7.83 | 0.828 | 0.89 | 0.879 | -0.392 | -- | -0.0441 | 20.8 | 23.14 | 835 | -- | -- |
| 37.69 | 0.286 | 7.84 | 0.801 | 0.894 | 0.932 | -- | 0.284 | -0.0532 | 20.9 | 23.04 | 817 | -- | -- |
| 37.75 | 0.286 | 7.83 | 0.847 | 0.88 | 0.882 | -- | -- | -0.0413 | 20.9 | 23.23 | 926 | -- | -- |
| 75.39 | 0.404 | 7.83 | 0.78 | -- | 1.17 | -- | 0.955 | -0.0579 | -- | 22.52 | 1523 | -- | -- |
| 47.05 | 0.322 | 7.86 | 0.592 | 0.81 | -- | -0.405 | -- | -0.188 | 20.6 | -- | -- | -- | -- |
| 47.55 | 0.323 | 7.86 | 0.604 | 0.809 | -- | -- | -- | -0.189 | 20.7 | -- | -- | -- | -- |
| 74.78 | 0.403 | 7.81 | 0.878 | -- | 0.992 | -- | -- | -0.0448 | -- | 22.58 | 1512 | -- | -- |
| 53.98 | 0.342 | 7.87 | -- | 0.832 | 0.457 | -- | -- | -0.194 | 20.7 | 23.85 | 552 | -- | -- |
| 84.47 | 0.429 | 7.84 | 0.602 | -- | -- | -- | -- | -0.196 | -- | -- | -- | -- | -- |
| 57.17 | 0.354 | 7.88 | -- | 0.807 | -- | -- | -- | -0.256 | 20.7 | -- | -- | -- | -- |
| 89.94 | 0.443 | 7.84 | -- | -- | 0.494 | -- | -- | -0.199 | -- | 23.85 | 552 | -- | -- |
| 94.03 | 0.453 | 7.86 | -- | -- | -- | -- | -- | -0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.58 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 2 | 34.71 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 9 | 35.09 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 2 | 5 |
| 29 | 35.53 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 35 | 35.56 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 10 |
| 45 | 35.69 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 72 | 36.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 83 | 36.12 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 84 | 36.12 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 24 | 3 |
| 90 | 36.14 | wind | 1.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 129 | 36.28 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 140 | 36.31 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 157 | 36.34 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 20 | 17 |
| 168 | 36.37 | wind | 3.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 183 | 36.40 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 184 | 36.40 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 186 | 36.40 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 191 | 36.42 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 196 | 36.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 197 | 36.44 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 202 | 36.45 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 208 | 36.45 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 212 | 36.46 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 220 | 36.47 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 251 | 36.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 253 | 36.52 | wind | 3.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 265 | 36.54 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 275 | 36.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 276 | 36.55 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 282 | 36.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 290 | 36.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 292 | 36.57 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 298 | 36.58 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 306 | 36.58 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 17 | 14 |
| 318 | 36.59 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 322 | 36.60 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 12 |
| 324 | 36.60 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 3 |
| 332 | 36.61 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 10 |
| 339 | 36.61 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 429 | 36.68 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 442 | 36.69 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 466 | 36.71 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 482 | 36.72 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 483 | 36.72 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 511 | 36.74 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 514 | 36.74 | humidity | 90.0 | 43200 | < th | dose dependent | sin | 13 | NA |
| 577 | 36.78 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 584 | 36.79 | humidity | 50.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 617 | 36.81 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 665 | 36.85 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 706 | 36.87 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 739 | 36.88 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 16 |
| 758 | 36.90 | humidity | 80.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 765 | 36.90 | temperature | 10.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 782 | 36.91 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 842 | 36.94 | humidity | 80.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 930 | 36.99 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 958 | 37.01 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 993 | 37.03 | wind | 1.0 | 43200 | < th | dose independent | rect. | 12 | 1 |