BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0619300 Os04g0619300|AK065137
(455 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0619300 Cyclin-like F-box domain containing protein 907 0.0
Os02g0748300 Similar to VMP3 protein 390 e-109
Os03g0171600 Cyclin-like F-box domain containing protein 376 e-104
Os11g0602800 Galactose oxidase, central domain containing p... 364 e-101
Os05g0267001 Galactose oxidase, central domain containing p... 113 2e-25
Os11g0194000 108 8e-24
Os10g0409900 Cyclin-like F-box domain containing protein 102 4e-22
Os02g0504900 Cyclin-like F-box domain containing protein 100 3e-21
Os03g0167800 Cyclin-like F-box domain containing protein 95 1e-19
Os04g0380300 Cyclin-like F-box domain containing protein 92 1e-18
Os02g0574900 Cyclin-like F-box domain containing protein 87 2e-17
Os10g0388200 Cyclin-like F-box domain containing protein 84 2e-16
Os10g0363600 Cyclin-like F-box domain containing protein 83 5e-16
Os02g0202900 Cyclin-like F-box domain containing protein 81 1e-15
Os06g0594400 Cyclin-like F-box domain containing protein 81 2e-15
Os07g0153400 Cyclin-like F-box domain containing protein 68 2e-11
>Os04g0619300 Cyclin-like F-box domain containing protein
Length = 455
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/455 (96%), Positives = 440/455 (96%)
Query: 1 MEDLQDCDCKSLVAVPGSVVLHLFRLFNQQDNSWQKYTLAYFLLVRNEYFSRDSRKHSDG 60
MEDLQDCDCKSLVAVPGSVVLHLFRLFNQQDNSWQKYTLAYFLLVRNEYFSRDSRKHSDG
Sbjct: 1 MEDLQDCDCKSLVAVPGSVVLHLFRLFNQQDNSWQKYTLAYFLLVRNEYFSRDSRKHSDG 60
Query: 61 KNQXXXXXXXXXXXXXXXYADLDSKELELKLQKPVVKTQSKGDSSASGSNDCFFPGLHDD 120
KNQ YADLDSKELELKLQKPVVKTQSKGDSSASGSNDCFFPGLHDD
Sbjct: 61 KNQLLDCCDDSELDLDVLYADLDSKELELKLQKPVVKTQSKGDSSASGSNDCFFPGLHDD 120
Query: 121 LAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYLACSLMPWEAFD 180
LAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYLACSLMPWEAFD
Sbjct: 121 LAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYLACSLMPWEAFD 180
Query: 181 PSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFGREYTGLAIWMYNLLARGWSRCTPM 240
PSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFGREYTGLAIWMYNLLARGWSRCTPM
Sbjct: 181 PSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFGREYTGLAIWMYNLLARGWSRCTPM 240
Query: 241 NLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYNSETGHWETLPDMNLPRRLSSGFFM 300
NLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYNSETGHWETLPDMNLPRRLSSGFFM
Sbjct: 241 NLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYNSETGHWETLPDMNLPRRLSSGFFM 300
Query: 301 DGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHDMYPGGTSASQSPPLVAVVNNQLYAA 360
DGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHDMYPGGTSASQSPPLVAVVNNQLYAA
Sbjct: 301 DGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHDMYPGGTSASQSPPLVAVVNNQLYAA 360
Query: 361 DQATNVVKKYDKGNNTWNIVKPLPVRADSSNGWGLAFKACGDRLLVIGGHRVPRGEVILL 420
DQATNVVKKYDKGNNTWNIVKPLPVRADSSNGWGLAFKACGDRLLVIGGHRVPRGEVILL
Sbjct: 361 DQATNVVKKYDKGNNTWNIVKPLPVRADSSNGWGLAFKACGDRLLVIGGHRVPRGEVILL 420
Query: 421 HSWCPEDGNGGADWEVLSVKERAGVFVYNCAIMGC 455
HSWCPEDGNGGADWEVLSVKERAGVFVYNCAIMGC
Sbjct: 421 HSWCPEDGNGGADWEVLSVKERAGVFVYNCAIMGC 455
>Os02g0748300 Similar to VMP3 protein
Length = 426
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/355 (55%), Positives = 245/355 (69%), Gaps = 10/355 (2%)
Query: 108 GSNDCFFP-------GLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKY 160
GSND F + D + CLA SRSDY S++ +N+ F+ L+ SG LY+ RR+
Sbjct: 75 GSNDQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERRQL 134
Query: 161 GIVEHWVYLACSLMPWEAFDPSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFGREYT 220
GI EHWVY +C++ WEA+DP R RWM LP+MP +ECF C+DKESLAVGT+LLVFG+E
Sbjct: 135 GIAEHWVYFSCNVQEWEAYDPYRSRWMTLPKMPHNECFMCSDKESLAVGTELLVFGKEIL 194
Query: 221 GLAIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYNSETG 280
+ Y++L WS MN PRCLF S SFGE AIVAGG D G+VL+SAELYNSET
Sbjct: 195 SHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVLRSAELYNSETK 254
Query: 281 HWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHDMYPGG 340
W TLP MN RR+ SG FM+GKFYVIGG++S + LTCGEEY+LE TWR I +M G
Sbjct: 255 RWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTWRVIENMSEGL 314
Query: 341 TSASQSPPLVAVVNNQLYAADQATNVVKKYDKGNNTWNIVKPLPVRADSSNGWGLAFKAC 400
AS +PPLVAVV N+LYAA A +V+KY+ +NTW + LP R ++ NGWG+AF+ C
Sbjct: 315 NGASGAPPLVAVVENELYAAQYAGKLVRKYNIKDNTWTTLGELPERPEAVNGWGIAFRGC 374
Query: 401 GDRLLVIGGHRVPRGEVILLHSWCPEDGNGGADWEVLSVKERAGVFVYNCAIMGC 455
G+RLLVIGG RV G +I LHSW P +G W ++ K +G FVYNCA+MGC
Sbjct: 375 GERLLVIGGPRVMGGGMIELHSWIPREGP--LRWNMIGSKP-SGNFVYNCAVMGC 426
>Os03g0171600 Cyclin-like F-box domain containing protein
Length = 431
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/356 (51%), Positives = 243/356 (68%), Gaps = 6/356 (1%)
Query: 100 SKGDSSASGSNDCFFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRK 159
+ G G+ + DL +CL SRSDY S++ LNK F L+ +G +YRLRR+
Sbjct: 82 ASGGGEEHGNGSSLIGAIGRDLTINCLLRLSRSDYGSVASLNKDFRSLVRNGEIYRLRRQ 141
Query: 160 YGIVEHWVYLACSLMPWEAFDPSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFGREY 219
G+ EHWVY +C+++ W+A+DP R+RW+++P+MP DECF C+DKESLAVGT+LLVF +
Sbjct: 142 SGVAEHWVYFSCNVLEWDAYDPYRERWIQVPKMPPDECFMCSDKESLAVGTELLVFAMAH 201
Query: 220 TGLAIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYNSET 279
++ Y++L W+R PM PRCLF S S G A VAGG D +G++L SAE+Y+SET
Sbjct: 202 I---VFRYSILTNSWTRADPMISPRCLFGSTSVGAKAYVAGGTDSSGRILSSAEMYDSET 258
Query: 280 GHWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHDMYPG 339
W LP MN R++ SG FMDGKFYV+GGV+S LTCGEEY+L+ R+WR I +M G
Sbjct: 259 HSWTPLPSMNRARKMCSGVFMDGKFYVVGGVASNNKVLTCGEEYDLKRRSWRVIENMSEG 318
Query: 340 GTSASQSPPLVAVVNNQLYAADQATNVVKKYDKGNNTWNIVKPLPVRADSSNGWGLAFKA 399
+ +PPL+AVVNN+LYAAD + VKKYDK NN W + LP R+ S NGWGLAF+A
Sbjct: 319 LNGVTGAPPLIAVVNNELYAADYSEKDVKKYDKQNNKWITLGKLPERSVSMNGWGLAFRA 378
Query: 400 CGDRLLVIGGHRVPRGEVILLHSWCPEDGNGGADWEVLSVKERAGVFVYNCAIMGC 455
CGDRL+VIGG R G I L+SW P++ W +++ + +G FVYNCA+MGC
Sbjct: 379 CGDRLIVIGGPRTSIGGTIELNSWTPDERP--PVWNLIA-RRPSGNFVYNCAVMGC 431
>Os11g0602800 Galactose oxidase, central domain containing protein
Length = 432
Score = 364 bits (934), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/354 (51%), Positives = 232/354 (65%), Gaps = 5/354 (1%)
Query: 103 DSSASGSNDCFFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGI 162
D + + + +LA CL RS Y ++CLN+ F L+ SG LYRLRR+ I
Sbjct: 83 DQNGEANTSELIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARI 142
Query: 163 VEHWVYLACSLMPWEAFDPSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFGREYTGL 222
VEH +Y +C+++ W+ FDP R+RW +P MP ECF+ ADKESLAVGT +LVFG++
Sbjct: 143 VEHMIYCSCNVLEWDGFDPCRQRWFNIPSMPPIECFTLADKESLAVGTNILVFGKKVEAH 202
Query: 223 AIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYNSETGHW 282
+ Y+LL+ W+ MN PRCLF S SFGE AIVAGG NG L SAELY+SE W
Sbjct: 203 VVLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAGGIGDNG-TLSSAELYDSEAKTW 261
Query: 283 ETLPDMNLPRRLSSGFFMDGKFYVIGG-VSSQRDSLTCGEEYNLETRTWRRIHDMYPGGT 341
TLP MN R++ SGFFMDGKFYVIGG + + L CGEE++LE TWR I DM G
Sbjct: 262 TTLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEILNCGEEFDLEKGTWRLIPDMASGLN 321
Query: 342 SASQSPPLVAVVNNQLYAADQATNVVKKYDKGNNTWNIVKPLPVRADSSNGWGLAFKACG 401
S +PPLVAVVNN+LYAAD A V++YDK NN W + LP + S NGWGLAF+ CG
Sbjct: 322 GGSGAPPLVAVVNNELYAADYAEKEVRRYDKVNNAWITLGSLPEKYTSVNGWGLAFRGCG 381
Query: 402 DRLLVIGGHRVPRGEVILLHSWCPEDGNGGADWEVLSVKERAGVFVYNCAIMGC 455
D+L+VIGG P G VI + SW P NG DW+++ + R+G FVYNCA+MGC
Sbjct: 382 DKLIVIGGMSAPGGGVIEICSWIPN--NGQPDWKIIGSR-RSGSFVYNCAVMGC 432
>Os05g0267001 Galactose oxidase, central domain containing protein
Length = 93
Score = 113 bits (283), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/60 (90%), Positives = 55/60 (91%), Gaps = 1/60 (1%)
Query: 246 LFASGSFGEIAIVAGGCDKNGQVLKSAELYNSETGHWETLPDMNLPRRLSSGFFMDGKFY 305
LFASGSF EIAIVAGGCDKNGQVLKSAELYNSETGHWETL DMNL RRLSS FF+DG FY
Sbjct: 27 LFASGSFDEIAIVAGGCDKNGQVLKSAELYNSETGHWETLADMNLARRLSSSFFLDG-FY 85
>Os11g0194000
Length = 93
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 235 SRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYNSETGHWETLPDMNLPRRL 294
+RC + P L GSFGEIAIVAGGCDKNGQVLKSAELYNSETGHWETLPDMNL RRL
Sbjct: 2 ARCMQVG-PVWLDGQGSFGEIAIVAGGCDKNGQVLKSAELYNSETGHWETLPDMNLARRL 60
Query: 295 SSGFFMD 301
SSGFF+D
Sbjct: 61 SSGFFLD 67
>Os10g0409900 Cyclin-like F-box domain containing protein
Length = 442
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 128/293 (43%), Gaps = 21/293 (7%)
Query: 97 KTQSKGD-SSASGSNDCFFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYR 155
K +S+G S + PGL DDLA CL R ++P+L + K++N L++ Y Y
Sbjct: 65 KCKSRGSRKERSRTQAPLLPGLPDDLAIACLIRVPRVEHPNLRIVCKRWNRLLSGNYYYS 124
Query: 156 LRRKYGIVEHWVYL----ACSLMPWEAFDPSRKRWMRLPRMPCDECFSCADKESLAVGTQ 211
LR++ G+ E WVY+ + W AFDP + W LP +P + + ++ G
Sbjct: 125 LRKRNGMAEEWVYVFKRDREGKISWHAFDPLHQLWKSLPPVPAEYSEALGFGCAVLSGCY 184
Query: 212 LLVFGRE----YTGLAIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGG-CDKNG 266
L +FG + + + YN W R M R F S VAGG C+
Sbjct: 185 LYLFGGKDPLRGSMRRVVFYNARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQ 244
Query: 267 QVLKSAELYNSETGHWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDSLTCGEEYNLE 326
+ L SAE+Y+ W + +MN G DGK++ + G+ S R E Y
Sbjct: 245 RTLPSAEVYDPNRNRWACVAEMNNGMVPFIGVVYDGKWF-LKGLDSHRQ--VTSEVYLPS 301
Query: 327 TRTWRRIHD-MYPGGTSASQSPPLVAVVNNQLYAADQATNV-VKKYDKGNNTW 377
+ W I D M G + S N +LY++D ++ YD TW
Sbjct: 302 SNLWSTIDDEMVTGWRNPS------ITFNGKLYSSDCRDGCKLRVYDPNTGTW 348
>Os02g0504900 Cyclin-like F-box domain containing protein
Length = 385
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 31/321 (9%)
Query: 89 LKLQKPVVKTQSKGDSSASGSNDCF---FPGLHDDLAQDCLAWASRSDYPSLSCLNKKFN 145
++L+ P S+G G +D + PGL +DLA+ CLA RS +P + ++K++
Sbjct: 22 MQLKAPTRAKYSQGFMPI-GESDAYCALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWM 80
Query: 146 LLINSGYLYRLRRKYGIVEHWVYLACSLM-----PWEAFDPSRKRWMRLPRMP--CDECF 198
+ S +R++ G +E WVY+ + WE S ++ LP MP F
Sbjct: 81 SFLESKEFIAVRKEVGKLEEWVYVLTADAGSKGSHWEVLGCSGQKHSPLPPMPGPTKAGF 140
Query: 199 SCA--DKESLAVGTQLLVFGREYTGLAIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIA 256
D + + G+E ++ Y+ W + MN+ RC FA +
Sbjct: 141 GVVVLDGKLFVIAGYAADHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMI 200
Query: 257 IVAGGCDKNGQVLKSAELYNSETGHWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDS 316
VAGG NG L S E+Y++E W + + PR +GK YV+GG R
Sbjct: 201 YVAGGFGPNGDSLSSVEVYDAEQNKWTLIESLRRPRWGCFACSFEGKLYVMGG----RSR 256
Query: 317 LTCG-----EEYNLETRTWRRIHDMYPGGTSASQSPPLVAVVNNQLYAAD-QATNVVKKY 370
T G + YN +W + + T+ AV++ +L+ + + + +
Sbjct: 257 FTIGNTRFVDVYNPNDNSWGEVKNGCVMVTAH-------AVLDKKLFCIEWKNQRSLAVF 309
Query: 371 DKGNNTWNIVKPLPVRADSSN 391
+ +N+W V P+P+ SS
Sbjct: 310 NPADNSWQKV-PVPLTGSSST 329
>Os03g0167800 Cyclin-like F-box domain containing protein
Length = 438
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 129/294 (43%), Gaps = 23/294 (7%)
Query: 100 SKGDSSASGSNDC-----FFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLY 154
+K S +S C PGL DDLA CL R ++ +L + K++N L++ Y Y
Sbjct: 60 NKRKSRSSHKERCRTQAPLLPGLPDDLAITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYY 119
Query: 155 RLRRKYGIVEHWVYLAC----SLMPWEAFDPSRKRWMRLPRMPCDECFSCADKESLAVGT 210
LR+K G+ E WV++ + W AFDP + W LP +P + + ++ G
Sbjct: 120 SLRKKLGMAEEWVFVFKRDRDRKISWHAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGC 179
Query: 211 QLLVFGRE----YTGLAIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGG-CDKN 265
L +FG + + + YN W R M R F S VAGG C+
Sbjct: 180 YLYLFGGKDPVRGSMRRVVFYNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGI 239
Query: 266 GQVLKSAELYNSETGHWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDSLTCGEEYNL 325
+ L+SAE Y+ W + +M+ G DGK++ + G+ S R ++ E Y
Sbjct: 240 QRTLRSAEFYDPNRNRWSYISEMSTGMVPFIGVVYDGKWF-LKGLDSHRQVVS--EVYMP 296
Query: 326 ETRTWRRIHDMYPGGTSASQSPPLVAVVNNQLYAADQATNV-VKKYDKGNNTWN 378
+ W D G ++P + N +LY+A+ ++ YD+ +W
Sbjct: 297 TSNVWSVTADEMVTGW---RNPSI--CFNGRLYSAECRDGCKLRVYDRDTRSWT 345
>Os04g0380300 Cyclin-like F-box domain containing protein
Length = 375
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 152/358 (42%), Gaps = 38/358 (10%)
Query: 98 TQSKGDSSASGSNDCFFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLR 157
T+++GDS + PGL +DLA+ CLA RS +P + ++K + I S +R
Sbjct: 28 TRTQGDSYGA-----LIPGLPEDLAKVCLALVPRSYFPVMGAVSKSWMSFIGSKEFIAVR 82
Query: 158 RKYGIVEHWVYLACS----LMP-WEAFDPSRKRWMRLPRMP--CDECFSCA--DKESLAV 208
++ G +E +Y + P WE ++ LP MP FS D + L +
Sbjct: 83 KEVGRLEERIYALITGDGGKGPYWEVLGSLEQQNRMLPPMPGLTKAGFSVVVLDGKLLVM 142
Query: 209 GTQLLVFGREYTGLAIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQV 268
+ +G+E ++ Y+ W+ MN+ R FA VAGG +G
Sbjct: 143 AGYGVDYGKECVSDEVYQYDARLNRWAALAKMNVARRDFACAEVNGAVYVAGGFGSDGDG 202
Query: 269 LKSAELYNSETGHWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDSLTCG-----EEY 323
L S E+Y+ + W + + PR S +GK Y++GG R S T G + Y
Sbjct: 203 LSSVEVYDPQRNKWTIIESLRRPRWGSFACSFNGKLYIMGG----RSSFTIGNSRFIDVY 258
Query: 324 NLETRTWRRIHDMYPGGTSASQSPPLVAVVNNQLYAAD-QATNVVKKYDKGNNTWNIVKP 382
+ +W I TS AV+N +L+ + + + ++ +++W + P
Sbjct: 259 DPILHSWTEIKKGCVMVTSH-------AVINKRLFCIEWKNQRSLAIFNPSDSSWQKI-P 310
Query: 383 LPVRADSSNGWGLAFKACGDRLLVIGGHRVPRGEVILLHSWCPEDGNGGADWEVLSVK 440
+P+ S+ + L +LL+ P + ++ P G++W ++K
Sbjct: 311 VPLTGSSATLFSLG--VLDGKLLLFSQEEEPGYQTLMYDPTAP----AGSEWHTSTLK 362
>Os02g0574900 Cyclin-like F-box domain containing protein
Length = 460
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 141/346 (40%), Gaps = 73/346 (21%)
Query: 113 FFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYLACS 172
P L D+L+ LA R Y L +++ + I S L +LRR+ G+ E W+Y+
Sbjct: 42 IIPTLPDELSFQILARLPRLYYLKLKLVSQAWKAAITSSELSQLRRELGLTEEWLYVLTK 101
Query: 173 LMPWE----AFDPSRKRWMRLPRMP--CDECFSCADKESL------AVGTQLLV------ 214
L P + A DP ++W RLP MP E S +S VG+ + +
Sbjct: 102 LEPNKLDCYALDPLFRKWQRLPPMPSFVSEEESTGRTQSSWFQTWNVVGSSIRIADFIKG 161
Query: 215 -FGREY-----------TGLA------------------IWMYNLLARGWSRCTPMNLPR 244
F R Y G+A ++ YN W +PM R
Sbjct: 162 WFRRRYGLDQMPFCGCSVGVADGCLYVFGGFSRAVALNCVFRYNPCLNVWQEVSPMISGR 221
Query: 245 CLFASGSFGEIAIVAGGCD--KNGQV-LKSAELYNSETGHWETLPDMNLPRR--LSSGFF 299
+ V GG +NG + L+S E+++ +TG W LP+M + L + F
Sbjct: 222 AFSKAALLQSKLYVVGGVSRGRNGLLPLRSGEVFDPKTGIWSELPEMPFMKAQVLPTAFL 281
Query: 300 MDGKFYVIGGVSSQRDSLTC--------------GEEYNLETRTWRRIHDMYPGGTSASQ 345
D + G++S + L GE Y+ E +W + D G A Q
Sbjct: 282 ADVLKPIATGMASYKGKLYVPQSLYSWPFFFDIGGEIYDPELNSWETMADGLGDGWPARQ 341
Query: 346 S-PPLVAVVNNQLYAADQATNV----VKKYDKGNNTWNIVKP-LPV 385
+ L VVN +LY + ++++ +K+YD +TW + P +PV
Sbjct: 342 AGTKLGIVVNEELYTLEPSSSLDSGQIKRYDSEQDTWKTIVPQVPV 387
>Os10g0388200 Cyclin-like F-box domain containing protein
Length = 347
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 129/314 (41%), Gaps = 44/314 (14%)
Query: 116 GLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYLACSLM- 174
GL +++A CLA +P L + + + +G L ++R + E L C L
Sbjct: 8 GLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATED---LLCVLAF 64
Query: 175 ----PWEAFDPSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFG-------------- 216
W+ +DP R +W+ LP MP + + A +V +L V G
Sbjct: 65 EPENMWQLYDPLRDKWITLPVMP-SQIRNIARFGVASVAGKLYVIGGGSDRVDPLTGDHD 123
Query: 217 REYTGLAIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYN 276
R + +W Y+ L R W + PM + R +FA + IVAGG + + AE+YN
Sbjct: 124 RIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAEIYN 183
Query: 277 SETGHWETLPDMNLPRRLS-SGFFMDGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHD 335
E WE LPD+ + SG + GK +V+ L G + +E +W
Sbjct: 184 PEADTWEPLPDLRQAHSSACSGLVIKGKMHVLHKGLPTVQILEDGNAWAVEDYSWL---- 239
Query: 336 MYPGGTSASQSPPLVAVVNNQLYAADQATNVVKKYDKGNNTWNIVKPLPVRADSSNGWGL 395
Q P +A+V +LY +N +G N + + S G+G+
Sbjct: 240 ---------QGP--MAMVRGELYV---LSNSCIMKQRGVNFPDKMVSCASEFQSRIGFGM 285
Query: 396 AFKACGDRLLVIGG 409
GD + ++GG
Sbjct: 286 I--GLGDNIYLVGG 297
>Os10g0363600 Cyclin-like F-box domain containing protein
Length = 475
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 134/337 (39%), Gaps = 70/337 (20%)
Query: 113 FFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYLAC- 171
PGL D+++ LA R Y + +++ + I LYR+R++ G+ E W+Y+
Sbjct: 45 LIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTK 104
Query: 172 ---SLMPWEAFDPSRKRWMRLPRMP----CDECFS------------------------C 200
+ W AFDP +W RLP MP EC
Sbjct: 105 SDDGKLVWNAFDPVCGQWQRLPLMPGISHGGECKRGIPGLWLGDLLSAGIRVSDVIRGWL 164
Query: 201 ADKESL--------AVGTQ---LLVFGREYTGLA---IWMYNLLARGWSRCTPMNLPRCL 246
++SL A+GT + V G G A +W Y+ W + M+ R
Sbjct: 165 GQRDSLDRLPFCGCAIGTVNGCIYVLGGFSRGSAMKCVWRYDPFVNAWQEVSSMSTGRAF 224
Query: 247 FASGSFGEIAIVAGGCD--KNGQV-LKSAELYNSETGHWETLPDMNLPR--RLSSGFFMD 301
+ V GG KNG L+SAE+++ TG W +PD+ + L + F +
Sbjct: 225 CKASLLNNKLYVVGGVSKGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSKAQALPTAFLAE 284
Query: 302 -------------GKFYVIGGVSSQRDSLTCGEE-YNLETRTWRRIHDMYPGGTSASQS- 346
GK YV + S + G E ++ ET +W + G A Q+
Sbjct: 285 LLKPIATGMTSFGGKLYVPQSLYSWPFFVDVGGEIFDPETNSWAEMPVGMGEGWPARQAG 344
Query: 347 PPLVAVVNNQLYAADQATNV----VKKYDKGNNTWNI 379
L AV++ LYA + +T+ +K YD + W +
Sbjct: 345 TKLSAVIDGDLYALEPSTSSDRGKIKIYDPQEDAWKV 381
>Os02g0202900 Cyclin-like F-box domain containing protein
Length = 436
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 116/283 (40%), Gaps = 26/283 (9%)
Query: 113 FFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYLAC- 171
PGL DDLA CL R D+ L + ++++ L+ Y Y LRR+ G+ E WVY
Sbjct: 76 LIPGLPDDLAVACLIRVPRGDHWKLRLVCRRWSRLLAGNYFYGLRRRLGLAEQWVYAVKR 135
Query: 172 ---SLMPWEAFDPSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFG----REYTGLAI 224
+ W+ DP+R W LP +P + + ++ G L + G R +
Sbjct: 136 DGEGRVSWDVLDPARLAWRALPPVPGEYAGAAGFGCAVLGGCHLYLLGGSDPRRGPMRRV 195
Query: 225 WMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVA-----GGCDKNGQVLKSAELYNSET 279
Y+ + W R M R F G VA G G L+S E+++
Sbjct: 196 VFYSARSNRWHRAPDMLRRRHGFGCCVMGNRLYVAGGEGCGVGGGGGGGLRSVEVFDPAK 255
Query: 280 GHWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHD---M 336
W + DM G++YV G+ +QR ++ + Y+ E W H+ M
Sbjct: 256 NRWSFVSDMAASLMPFVSAVHGGRWYV-KGLGAQRQVMS--QVYSPEADAWSAAHELDAM 312
Query: 337 YPGGTSASQSPPLVAVVNNQLYAADQATNV-VKKYDKGNNTWN 378
G S S S + +LYAAD ++ YD+ W+
Sbjct: 313 VTGWRSPSAS------LGGRLYAADCKDGCRLRAYDEAAGAWS 349
>Os06g0594400 Cyclin-like F-box domain containing protein
Length = 381
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 142/371 (38%), Gaps = 60/371 (16%)
Query: 113 FFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYL--- 169
PGL +++A++CL P++ +++++ + S RLR+ G+ + L
Sbjct: 6 LIPGLPEEVARECLIRVGFDQLPAVRRISRQWKAEVESPAYNRLRKAEGLARPALALVQA 65
Query: 170 ---------------ACSLMPWEAF-----DPSRKRWMRLPRMPCDE------CFSCADK 203
+ +P ++ DP+ RW LP + C A
Sbjct: 66 RRELAEAGPAADKQSSAGGVPGNSYRMVLLDPAEGRWTPLPEVGGASGSLPLFCQVAAVD 125
Query: 204 ESLAVGTQLLVFG-----REYTGLAIWMYNLLARGWSRCTPMNLPR-CLFASGSFGEIAI 257
+ +L+V G ++ +Y+ L W R M PR FA + G
Sbjct: 126 GGVEGRKRLVVVGGWDPETWAPTDSVLVYDFLTGAWRRGAAMPGPRRSFFACAAVGGKVF 185
Query: 258 VAGGCDKNGQVLKSAELYNSETGHWETLPDMNLPRRLSSGFFMDGKFYVIGG--VSSQRD 315
VAGG D+ L+SA Y+ + W LPDM R G +DGKF V+GG +Q
Sbjct: 186 VAGGHDEEKNALRSALAYDPDADAWAALPDMAEERDEPRGLCVDGKFLVVGGYPTPAQGR 245
Query: 316 SLTCGEEYNLETRTWRRIHDMYPGGTSASQSPPLVAVVNNQLYAADQATNVVK--KYDKG 373
+ E ++ T TW + + + + ++ +++Y V +
Sbjct: 246 FVGSAEWFDPATSTWSAVQEGFVDDGACPRTCSAAPEAGDRMYMLRDGHLVARHGAISSA 305
Query: 374 NNTWNIVKPLPVRADSSNGWGLAFKACGDRLLVIGGHRVPRGEVILLHSWCPEDGNGGAD 433
W V P+P A ++ + +P G V+++ S C G D
Sbjct: 306 PAAWRPVAPVPEDARTAAAVSV----------------IPDGRVVVIGSDC-----HGGD 344
Query: 434 WEVLSVKERAG 444
V +++E AG
Sbjct: 345 QTVYTLREEAG 355
>Os07g0153400 Cyclin-like F-box domain containing protein
Length = 406
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 121/293 (41%), Gaps = 27/293 (9%)
Query: 113 FFPGLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKY-----GIVEHWV 167
PGL DD A +CL + + + ++++ L+ + ++RK ++
Sbjct: 53 LIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFTLA 112
Query: 168 YLACS-LMPWEAFDPSRKRWMRLPRMPCDE-----CFSCADKESLAVGTQLLVFGREYTG 221
+ C+ + W+ D + W +P MPC + F C ++ LLV G +
Sbjct: 113 FHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCV---AIPSDGTLLVCGGLVSD 169
Query: 222 L-----AIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYN 276
+ + Y++ W+ T M R FA G VAGG + L SAE+ +
Sbjct: 170 MDCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQFELNSAEVLD 229
Query: 277 SETGHWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHDM 336
G W+ + M + S + G+ YV G + S G+ Y+ + W ++
Sbjct: 230 PVKGVWQPVASMGMNMASSDSAVISGRLYVTEGCAWPFFSSPRGQVYDPKIDRW----EV 285
Query: 337 YPGGTSASQSPPLVAVVNNQLYAADQATNV-VKKYDKGNNTWNIVK--PLPVR 386
P G + L V++ L+ + + VK YD ++W+ VK P+P R
Sbjct: 286 MPVGMREGWT-GLSVVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPER 337
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,124,385
Number of extensions: 749257
Number of successful extensions: 1818
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 1786
Number of HSP's successfully gapped: 16
Length of query: 455
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 351
Effective length of database: 11,605,545
Effective search space: 4073546295
Effective search space used: 4073546295
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)