BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0616300 Os04g0616300|J013049G05
(96 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0616300 Protein kinase domain containing protein 202 4e-53
Os04g0616700 Protein kinase-like domain containing protein 113 3e-26
Os04g0616400 Similar to Receptor-like serine/threonine kinase 105 9e-24
Os04g0291900 Protein kinase-like domain containing protein 96 8e-21
Os05g0263100 95 1e-20
Os08g0203400 Protein kinase-like domain containing protein 94 2e-20
Os04g0616200 Protein kinase-like domain containing protein 93 4e-20
Os08g0203300 Protein kinase-like domain containing protein 92 9e-20
Os08g0203700 Protein kinase-like domain containing protein 92 1e-19
Os05g0256100 Serine/threonine protein kinase domain contain... 90 4e-19
Os05g0258400 Protein kinase-like domain containing protein 89 8e-19
Os08g0201700 Protein kinase-like domain containing protein 87 4e-18
Os10g0483400 Protein kinase-like domain containing protein 65 9e-12
Os11g0470200 Protein kinase-like domain containing protein 65 1e-11
Os03g0717000 Similar to TMK protein precursor 64 2e-11
>Os04g0616300 Protein kinase domain containing protein
Length = 96
Score = 202 bits (514), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%)
Query: 1 QEDACQHESCWYIVSTFHLFHLYVYNHIYVNGIFGYPLSSGYLAPEYAMRGHMTEKVDVF 60
QEDACQHESCWYIVSTFHLFHLYVYNHIYVNGIFGYPLSSGYLAPEYAMRGHMTEKVDVF
Sbjct: 1 QEDACQHESCWYIVSTFHLFHLYVYNHIYVNGIFGYPLSSGYLAPEYAMRGHMTEKVDVF 60
Query: 61 AFGVVLLETLAGRPNYDDTLEEDKIYIFEWVSSVAQ 96
AFGVVLLETLAGRPNYDDTLEEDKIYIFEWVSSVAQ
Sbjct: 61 AFGVVLLETLAGRPNYDDTLEEDKIYIFEWVSSVAQ 96
>Os04g0616700 Protein kinase-like domain containing protein
Length = 953
Score = 113 bits (283), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/51 (98%), Positives = 50/51 (98%)
Query: 41 GYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGRPNYDDTLEEDKIYIFEWV 91
GYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGRPNYDD LEEDKIYIFEWV
Sbjct: 846 GYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGRPNYDDVLEEDKIYIFEWV 896
>Os04g0616400 Similar to Receptor-like serine/threonine kinase
Length = 357
Score = 105 bits (261), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 59/82 (71%), Gaps = 10/82 (12%)
Query: 14 VSTFHLFHLYVYNHIYVN----GIFGYPLSSGYLAPEYAMRGHMTEKVDVFAFGVVLLET 69
+S F L LY +V+ G FGY LAPEYAMRG +TEKVDVFAFGVVLLET
Sbjct: 171 ISDFGLAKLYDDKKTHVSTKVAGTFGY------LAPEYAMRGRLTEKVDVFAFGVVLLET 224
Query: 70 LAGRPNYDDTLEEDKIYIFEWV 91
LAGRPNYDD LEEDKIYIFEW
Sbjct: 225 LAGRPNYDDALEEDKIYIFEWA 246
>Os04g0291900 Protein kinase-like domain containing protein
Length = 1146
Score = 95.5 bits (236), Expect = 8e-21, Method: Composition-based stats.
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 14 VSTFHLFHLYVYNHIYVNGIFGYPLSSGYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGR 73
+S F L LY +V+ L GYLAPEYAMRGH++EK DVFAFGVV+LET+AGR
Sbjct: 815 ISDFGLAKLYDEKQTHVSTRIAGTL--GYLAPEYAMRGHLSEKADVFAFGVVMLETVAGR 872
Query: 74 PNYDDTLEEDKIYIFEW 90
PN +++LEE+KIY+ EW
Sbjct: 873 PNTNNSLEENKIYLLEW 889
>Os05g0263100
Length = 870
Score = 94.7 bits (234), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 14 VSTFHLFHLYVYNHIYVNGIFGYPLSSGYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGR 73
+S F L LY N +V+ L GYLAPEYAMRGH++EK D+FAFGVV+LET+AGR
Sbjct: 709 ISDFGLAKLYDENQTHVSTRIAGTL--GYLAPEYAMRGHLSEKADIFAFGVVMLETVAGR 766
Query: 74 PNYDDTLEEDKIYIFEW 90
PN D++LEE KI + EW
Sbjct: 767 PNTDNSLEESKICLLEW 783
>Os08g0203400 Protein kinase-like domain containing protein
Length = 1024
Score = 94.0 bits (232), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/84 (58%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
Query: 14 VSTFHLFHLYVYNHIYVN-GIFGYPLSSGYLAPEYAMRGHMTEKVDVFAFGVVLLETLAG 72
+S F L LY +V+ GI G + GYLAPEYAMR H+TEKVDVFAFGVV LE +AG
Sbjct: 831 ISDFGLAKLYDEKKTHVSTGIAG---TFGYLAPEYAMRRHLTEKVDVFAFGVVALEIVAG 887
Query: 73 RPNYDDTLEEDKIYIFEWVSSVAQ 96
R N D++LEE KIY+FEW S+ +
Sbjct: 888 RSNTDNSLEESKIYLFEWAWSLYE 911
>Os04g0616200 Protein kinase-like domain containing protein
Length = 328
Score = 93.2 bits (230), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 56/82 (68%), Gaps = 10/82 (12%)
Query: 14 VSTFHLFHLYVYNHIYVN----GIFGYPLSSGYLAPEYAMRGHMTEKVDVFAFGVVLLET 69
+S F L LY +V+ G FGY LAPEYAMRGHMTEKVDVFAFGVV LET
Sbjct: 124 ISDFGLAKLYDNKKTHVSTKVAGTFGY------LAPEYAMRGHMTEKVDVFAFGVVALET 177
Query: 70 LAGRPNYDDTLEEDKIYIFEWV 91
+AG NY +TLEED+ YIFE V
Sbjct: 178 VAGESNYQNTLEEDRTYIFERV 199
>Os08g0203300 Protein kinase-like domain containing protein
Length = 665
Score = 92.0 bits (227), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/81 (56%), Positives = 56/81 (69%), Gaps = 10/81 (12%)
Query: 14 VSTFHLFHLYVYNHIYVN----GIFGYPLSSGYLAPEYAMRGHMTEKVDVFAFGVVLLET 69
+S F L LY +++ G FGY LAPEYAMRGH+TEK DVFAFGVV LET
Sbjct: 472 ISDFGLAKLYDEKETHISTKIAGTFGY------LAPEYAMRGHLTEKADVFAFGVVALET 525
Query: 70 LAGRPNYDDTLEEDKIYIFEW 90
+AGR N D++L+ DKIY+FEW
Sbjct: 526 VAGRSNTDNSLDNDKIYLFEW 546
>Os08g0203700 Protein kinase-like domain containing protein
Length = 1023
Score = 91.7 bits (226), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/81 (59%), Positives = 55/81 (67%), Gaps = 10/81 (12%)
Query: 14 VSTFHLFHLYVYNHIYVN----GIFGYPLSSGYLAPEYAMRGHMTEKVDVFAFGVVLLET 69
+S F L LY +VN G FGY LAPEYAMRGH+TEKVDVF+FGVV LET
Sbjct: 830 ISDFGLAKLYDEKKTHVNTKVAGTFGY------LAPEYAMRGHLTEKVDVFSFGVVALET 883
Query: 70 LAGRPNYDDTLEEDKIYIFEW 90
+AGR N D +L EDK Y+FEW
Sbjct: 884 VAGRSNTDYSLVEDKKYLFEW 904
>Os05g0256100 Serine/threonine protein kinase domain containing protein
Length = 340
Score = 89.7 bits (221), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Query: 14 VSTFHLFHLYVYNHIYVN-GIFGYPLSSGYLAPEYAMRGHMTEKVDVFAFGVVLLETLAG 72
+S F L LY +V+ GI G + GYLAPEYAMRGH+T+K DVFAFGVV+LET+AG
Sbjct: 151 ISDFGLAKLYDEKQTHVSTGIAG---TFGYLAPEYAMRGHLTQKADVFAFGVVMLETVAG 207
Query: 73 RPNYDDTLEEDKIYIFEW 90
R N +++LEE KI + EW
Sbjct: 208 RSNTNNSLEESKINLLEW 225
>Os05g0258400 Protein kinase-like domain containing protein
Length = 797
Score = 89.0 bits (219), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Query: 14 VSTFHLFHLYVYNHIYVNG-IFGYPLSSGYLAPEYAMRGHMTEKVDVFAFGVVLLETLAG 72
+S F L LY +V+ I G + GYLAPEYAMRGH++EK DVFAFGV++LET+AG
Sbjct: 603 ISDFGLAKLYDEKKTHVSTRIAG---TMGYLAPEYAMRGHLSEKADVFAFGVLMLETVAG 659
Query: 73 RPNYDDTLEEDKIYIFEW 90
R N +++LEE KIY+ EW
Sbjct: 660 RSNTNNSLEESKIYLLEW 677
>Os08g0201700 Protein kinase-like domain containing protein
Length = 854
Score = 86.7 bits (213), Expect = 4e-18, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 41 GYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGRPNYDDTLEEDKIYIFEW 90
GYLAPEYAM GH+TEK DVFAFG+V +E +AGRPN+DD++E+DK Y+ W
Sbjct: 673 GYLAPEYAMMGHLTEKADVFAFGIVAMEIIAGRPNFDDSVEDDKKYLLGW 722
>Os10g0483400 Protein kinase-like domain containing protein
Length = 387
Score = 65.5 bits (158), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 14 VSTFHLFHLYVYNHIYVNGIFGYPLSSGYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGR 73
++ F L L +H +++ F L GY APEYA+ G ++EKVD ++FGVV+LE ++GR
Sbjct: 210 IADFGLARLLPDDHSHLSTKFAGTL--GYTAPEYAIHGQLSEKVDTYSFGVVVLEIISGR 267
Query: 74 PNYDDTLEEDKIYIFEW 90
D L+ D Y+ EW
Sbjct: 268 KLNDARLDPDSQYLLEW 284
>Os11g0470200 Protein kinase-like domain containing protein
Length = 407
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 14 VSTFHLFHLYVYNHIYVNGIFGYPLSSGYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGR 73
++ F L L +H +++ F L GY APEYA+ G ++EKVD + FGVV LE + GR
Sbjct: 230 IADFGLARLIPDDHSHLSTNFAGTL--GYTAPEYAIHGQLSEKVDTYGFGVVTLEIIGGR 287
Query: 74 PNYDDTLEEDKIYIFEW 90
D LE D Y+ EW
Sbjct: 288 KLNDARLEPDSQYLLEW 304
>Os03g0717000 Similar to TMK protein precursor
Length = 842
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 41 GYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGRPNYDDTLEEDKIYIFEW 90
GYLAPEYA+ G +T K DVF+FGV+L+E + GR D+T ED +++ W
Sbjct: 659 GYLAPEYAVTGRVTTKADVFSFGVILMELITGRKALDETQPEDSMHLVTW 708
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.140 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,368,911
Number of extensions: 121502
Number of successful extensions: 1527
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1559
Number of HSP's successfully gapped: 15
Length of query: 96
Length of database: 17,035,801
Length adjustment: 65
Effective length of query: 31
Effective length of database: 13,641,891
Effective search space: 422898621
Effective search space used: 422898621
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 149 (62.0 bits)