Os11g0470200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os11g0470200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 195.41 | 0.657 | 6.97 | 4.57 | 1.12 | 1.06 | -1.21 | 0.454 | 2.52 | 3.3 | 64.46 | 4388 | -- | -- |
| 195.7 | 0.652 | 6.97 | 4.56 | 1.12 | 1.07 | -1.16 | -- | 2.51 | 3.29 | 64.35 | 4369 | -- | -- |
| 200 | 0.659 | 6.97 | 4.59 | 1.12 | 1.09 | -- | 0.414 | 2.52 | 3.22 | 64.57 | 4391 | -- | -- |
| 200.23 | 0.659 | 6.97 | 4.57 | 1.11 | 1.11 | -- | -- | 2.5 | 3.23 | 64.49 | 4391 | -- | -- |
| 262.78 | 0.755 | 6.96 | 4.6 | -- | 1.36 | -- | 0.493 | 2.53 | -- | 64 | 4691 | -- | -- |
| 216.06 | 0.689 | 6.92 | 4.59 | 1.12 | -- | -1.33 | -- | 2.75 | 3.2 | -- | -- | -- | -- |
| 221.76 | 0.697 | 6.91 | 4.62 | 1.11 | -- | -- | -- | 2.76 | 3.11 | -- | -- | -- | -- |
| 262.02 | 0.754 | 6.97 | 4.6 | -- | 1.32 | -- | -- | 2.53 | -- | 64.17 | 4691 | -- | -- |
| 556.77 | 1.1 | 6.9 | -- | 1.32 | 1.73 | -- | -- | 2.53 | 3.6 | 55.29 | 30366 | -- | -- |
| 292.23 | 0.799 | 6.91 | 4.66 | -- | -- | -- | -- | 2.79 | -- | -- | -- | -- | -- |
| 783.62 | 1.31 | 7.03 | -- | 1.2 | -- | -- | -- | 2.24 | 3.12 | -- | -- | -- | -- |
| 457.28 | 0.996 | 7.08 | -- | -- | 3.89 | -- | -- | 2.04 | -- | 63.98 | 47520 | -- | -- |
| 866.14 | 1.37 | 7.03 | -- | -- | -- | -- | -- | 2.27 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 192.94 | humidity | 60 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 2 | 193.20 | humidity | 90 | 4320 | < th | dose dependent | rect. | 10 | 6 |
| 7 | 193.48 | humidity | 50 | 4320 | > th | dose dependent | rect. | 10 | 6 |
| 10 | 193.56 | humidity | 60 | 4320 | > th | dose dependent | rect. | 10 | 3 |
| 101 | 194.56 | humidity | 60 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 120 | 194.64 | humidity | 90 | 4320 | < th | dose dependent | sin | 23 | NA |
| 136 | 194.71 | humidity | 50 | 4320 | > th | dose dependent | sin | 23 | NA |
| 140 | 194.72 | humidity | 80 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 272 | 195.29 | humidity | 60 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 283 | 195.31 | humidity | 80 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 284 | 195.32 | humidity | 50 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 388 | 195.59 | humidity | 80 | 4320 | < th | dose dependent | rect. | 20 | 21 |
| 430 | 195.69 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 608 | 196.11 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 612 | 196.12 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 629 | 196.14 | wind | 9 | 720 | < th | dose independent | rect. | 9 | 12 |
| 651 | 196.17 | wind | 9 | 10 | < th | dose dependent | rect. | 11 | 21 |
| 719 | 196.30 | wind | 7 | 10 | < th | dose independent | rect. | 11 | 21 |
| 726 | 196.31 | atmosphere | 995 | 720 | > th | dose independent | rect. | 9 | 12 |
| 727 | 196.31 | humidity | 80 | 4320 | < th | dose dependent | no | NA | NA |
| 830 | 196.55 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 840 | 196.57 | humidity | 80 | 4320 | < th | dose dependent | rect. | 14 | 23 |
| 931 | 196.88 | humidity | 80 | 4320 | < th | dose independent | rect. | 8 | 13 |
| 932 | 196.88 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 937 | 196.89 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 943 | 196.90 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 960 | 196.95 | atmosphere | 995 | 720 | > th | dose independent | rect. | 9 | 21 |
| 972 | 196.97 | wind | 1 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 986 | 197.01 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 18 | 3 |
| 994 | 197.03 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 8 |