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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0291900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.11 (0.017) R2 : 0.00536
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0561 (0.0358) R2dN8 : 0.00692 R2N8 : 0.00536
σ : 0.32
deviance : 47.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
45.04 0.315 3.12 0.102 0.11 0.136 -0.221 0.79 0.0421 5.76 90 5911 -- --
45.84 0.315 3.12 0.0484 0.122 0.187 -0.245 -- 0.022 5.48 105 4523 -- --
45.15 0.313 3.12 0.101 0.114 0.14 -- 0.809 0.0437 5.83 90 6055 -- --
45.99 0.316 3.12 0.0485 0.121 0.187 -- -- 0.0179 5.69 129.1 4550 -- --
45.78 0.315 3.12 0.11 -- 0.129 -- 0.82 0.0479 -- 90 5889 -- --
46.27 0.319 3.11 0.0408 0.11 -- -0.237 -- 0.0573 5.66 -- -- -- --
46.4 0.319 3.11 0.0397 0.109 -- -- -- 0.0584 5.89 -- -- -- --
46.62 0.318 3.12 0.0511 -- 0.178 -- -- 0.024 -- 135.4 4258 -- --
46.05 0.316 3.12 -- 0.118 0.18 -- -- 0.0144 5.67 176.5 4491 -- --
47.02 0.32 3.11 0.043 -- -- -- -- 0.0609 -- -- -- -- --
46.44 0.319 3.11 -- 0.11 -- -- -- 0.0539 5.88 -- -- -- --
46.69 0.318 3.12 -- -- 0.174 -- -- 0.0194 -- 157 4254 -- --
47.07 0.32 3.11 -- -- -- -- -- 0.0561 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 43.65 humidity 90.0 10 < th dose independent rect. 4 1
3 43.82 atmosphere 995.0 720 > th dose independent rect. 23 16
4 43.89 radiation 10.0 30 > th dose independent rect. 7 1
5 43.92 humidity 80.0 10 < th dose independent rect. 6 2
7 43.97 wind 7.0 1440 < th dose independent rect. 23 1
9 43.97 precipitation 0.1 720 < th dose independent rect. 15 8
10 43.97 temperature 25.0 30 > th dose dependent rect. 22 1
11 43.97 precipitation 0.1 720 < th dose dependent rect. 15 8
12 44.01 humidity 90.0 30 < th dose dependent rect. 22 1
15 44.02 temperature 25.0 30 > th dose independent rect. 22 1
16 44.02 temperature 10.0 1440 > th dose independent rect. 23 1
19 44.02 temperature 30.0 1440 < th dose independent rect. 23 1
23 44.02 humidity 50.0 1440 > th dose independent rect. 23 1
33 44.02 humidity 90.0 30 < th dose independent rect. 22 1
34 44.02 atmosphere 995.0 1440 > th dose independent rect. 23 1
35 44.02 radiation 1.0 1440 < th dose independent rect. 23 1
55 44.02 temperature 10.0 1440 > th dose independent rect. 24 23
58 44.02 radiation 1.0 1440 < th dose dependent rect. 23 1
65 44.04 temperature 10.0 720 > th dose independent rect. 15 8
66 44.04 temperature 10.0 720 > th dose independent rect. 23 16
67 44.04 atmosphere 1005.0 30 > th dose dependent rect. 22 1
69 44.05 atmosphere 1005.0 30 > th dose independent rect. 22 1
74 44.06 atmosphere 995.0 30 > th dose dependent rect. 22 1
77 44.07 wind 9.0 30 < th dose independent rect. 23 23
78 44.08 wind 1.0 30 > th dose independent rect. 22 1
79 44.08 wind 3.0 30 < th dose independent rect. 22 1
83 44.08 temperature 10.0 30 > th dose independent rect. 22 1
85 44.08 temperature 30.0 30 < th dose independent rect. 22 1
86 44.08 humidity 50.0 30 > th dose independent rect. 22 1
89 44.08 atmosphere 995.0 30 > th dose independent rect. 22 1
91 44.08 atmosphere 1010.0 30 < th dose independent rect. 22 1
93 44.08 radiation 1.0 30 < th dose independent rect. 22 1
98 44.08 precipitation 0.1 30 < th dose independent rect. 22 1
99 44.08 temperature 10.0 30 > th dose independent rect. 23 23
100 44.08 wind 9.0 30 < th dose dependent rect. 22 1
101 44.08 radiation 1.0 30 < th dose dependent rect. 22 1
107 44.08 precipitation 0.1 30 < th dose dependent rect. 22 1
109 44.09 wind 1.0 30 > th dose dependent rect. 22 1
110 44.09 wind 5.0 30 < th dose dependent rect. 22 1
114 44.10 humidity 50.0 30 > th dose dependent rect. 22 1
130 44.13 temperature 10.0 720 > th dose independent rect. 3 8
131 44.13 atmosphere 995.0 720 > th dose independent rect. 3 8
132 44.13 humidity 80.0 10 < th dose independent rect. 23 9
133 44.13 temperature 10.0 720 > th dose independent rect. 11 16
136 44.13 atmosphere 1015.0 30 < th dose dependent rect. 22 1
137 44.13 atmosphere 1005.0 30 > th dose dependent rect. 2 3
145 44.16 precipitation 0.1 720 < th dose independent rect. 11 16
147 44.16 precipitation 0.1 720 < th dose dependent rect. 11 16
150 44.17 temperature 30.0 30 < th dose dependent rect. 22 1
152 44.18 humidity 50.0 720 > th dose independent rect. 3 8
161 44.23 radiation 10.0 30 > th dose independent rect. 16 16
162 44.23 atmosphere 995.0 30 > th dose independent rect. 23 23
166 44.25 wind 1.0 30 > th dose independent rect. 4 1
168 44.25 wind 1.0 30 > th dose dependent rect. 4 1
192 44.28 wind 9.0 720 < th dose independent rect. 3 8
203 44.32 temperature 25.0 90 > th dose independent rect. 4 1
221 44.39 atmosphere 995.0 720 > th dose independent rect. 15 8
222 44.39 atmosphere 1005.0 10 > th dose dependent rect. 4 1
230 44.41 temperature 25.0 90 > th dose dependent rect. 4 1
232 44.45 atmosphere 995.0 720 > th dose independent rect. 11 16
234 44.46 radiation 40.0 720 < th dose independent rect. 15 8
239 44.47 humidity 90.0 10 < th dose dependent rect. 4 1
264 44.58 humidity 80.0 14400 < th dose dependent rect. 3 6
269 44.61 precipitation 0.1 1440 < th dose independent rect. 23 1
271 44.61 precipitation 0.1 1440 < th dose dependent rect. 23 1
275 44.64 wind 9.0 720 < th dose independent rect. 15 8
280 44.68 atmosphere 1000.0 720 > th dose independent rect. 21 14
284 44.69 atmosphere 1015.0 720 < th dose independent rect. 3 8
287 44.73 atmosphere 1000.0 90 > th dose independent rect. 23 12
288 44.73 humidity 90.0 10 < th dose dependent rect. 7 1
293 44.74 precipitation 0.1 30 < th dose independent rect. 23 23
295 44.74 precipitation 0.1 30 < th dose dependent rect. 23 23
297 44.75 atmosphere 1000.0 720 > th dose independent rect. 23 10
306 44.79 humidity 80.0 14400 < th dose dependent rect. 22 12
314 44.82 temperature 25.0 30 > th dose independent rect. 20 3
317 44.82 humidity 90.0 90 < th dose dependent rect. 2 6
324 44.84 atmosphere 1005.0 30 > th dose independent rect. 2 3
325 44.84 precipitation 0.1 720 < th dose independent rect. 3 8
327 44.84 precipitation 0.1 720 < th dose dependent rect. 3 8
329 44.85 atmosphere 1000.0 30 > th dose independent rect. 8 23
335 44.88 humidity 70.0 14400 > th dose independent rect. 8 1
336 44.88 atmosphere 995.0 720 > th dose independent rect. 1 22
337 44.88 humidity 50.0 30 > th dose independent rect. 23 23
344 44.89 humidity 70.0 14400 > th dose independent rect. 7 3
345 44.89 humidity 70.0 14400 > th dose independent rect. 5 5
356 44.90 humidity 70.0 14400 < th dose independent rect. 8 2
362 44.90 temperature 30.0 10 < th dose dependent rect. 4 1
369 44.90 atmosphere 1005.0 30 > th dose dependent rect. 20 3
373 44.91 temperature 25.0 270 > th dose independent rect. 2 1
390 44.91 humidity 90.0 10 < th dose independent rect. 3 20
393 44.91 radiation 1.0 30 > th dose dependent rect. 7 1
403 44.93 atmosphere 1005.0 10 > th dose independent rect. 4 1
406 44.93 temperature 30.0 90 < th dose independent rect. 11 12
413 44.94 temperature 25.0 90 > th dose independent rect. 1 4
414 44.94 precipitation 0.1 720 < th dose independent rect. 23 16
415 44.94 atmosphere 995.0 720 > th dose independent rect. 13 22
417 44.94 precipitation 0.1 720 < th dose dependent rect. 23 16
419 44.95 radiation 40.0 90 < th dose independent rect. 11 12
420 44.95 temperature 25.0 270 > th dose dependent rect. 2 1
421 44.95 temperature 25.0 90 > th dose dependent rect. 2 3
425 44.96 wind 7.0 1440 < th dose independent rect. 5 1
427 44.96 temperature 10.0 1440 > th dose independent rect. 5 1
430 44.96 temperature 30.0 1440 < th dose independent rect. 5 1
434 44.96 humidity 50.0 1440 > th dose independent rect. 5 1
444 44.96 atmosphere 995.0 1440 > th dose independent rect. 5 1
445 44.96 atmosphere 1015.0 1440 < th dose independent rect. 5 1
446 44.96 radiation 20.0 1440 < th dose independent rect. 5 1
465 44.96 temperature 10.0 1440 > th dose independent rect. 6 23
472 44.97 wind 5.0 30 < th dose independent rect. 4 1
488 44.98 temperature 10.0 30 > th dose independent rect. 4 1
491 44.98 temperature 30.0 30 < th dose independent rect. 4 1
492 44.98 humidity 50.0 30 > th dose independent rect. 4 1
497 44.98 atmosphere 1010.0 30 < th dose independent rect. 4 1
500 44.98 radiation 1.0 30 < th dose independent rect. 4 1
505 44.98 precipitation 0.1 30 < th dose independent rect. 4 1
509 44.98 temperature 10.0 30 > th dose independent rect. 5 23
511 44.98 radiation 1.0 30 < th dose dependent rect. 4 1
516 44.98 precipitation 0.1 30 < th dose dependent rect. 4 1
519 44.98 temperature 10.0 30 > th dose dependent rect. 23 3
526 44.99 atmosphere 1000.0 90 > th dose independent rect. 11 12
546 45.00 humidity 50.0 90 > th dose independent rect. 23 12
549 45.00 temperature 10.0 30 > th dose dependent rect. 4 1
559 45.00 atmosphere 1000.0 30 > th dose dependent rect. 2 6
571 45.03 wind 1.0 30 > th dose independent rect. 7 1
574 45.03 humidity 80.0 90 < th dose independent rect. 24 5
576 45.03 wind 9.0 10 < th dose dependent rect. 4 1
578 45.03 humidity 50.0 30 > th dose dependent rect. 4 1
598 45.05 wind 5.0 30 < th dose independent rect. 7 1
599 45.05 atmosphere 1005.0 30 > th dose independent rect. 7 1
600 45.05 wind 1.0 720 > th dose independent rect. 23 2
602 45.05 temperature 10.0 90 > th dose independent rect. 11 12
603 45.05 temperature 10.0 90 > th dose independent rect. 23 12
605 45.05 atmosphere 1015.0 90 < th dose independent rect. 11 12
606 45.05 wind 9.0 720 < th dose independent rect. 23 16
612 45.06 humidity 60.0 14400 < th dose independent rect. 11 1
613 45.06 wind 9.0 90 < th dose independent rect. 11 12
614 45.06 temperature 30.0 90 < th dose independent rect. 23 12
615 45.06 radiation 30.0 10 < th dose independent rect. 23 12
616 45.06 wind 1.0 90 > th dose independent rect. 1 22
620 45.07 humidity 60.0 4320 > th dose independent rect. 11 2
621 45.07 atmosphere 1000.0 720 > th dose independent rect. 11 2
623 45.07 temperature 30.0 4320 < th dose independent rect. 3 6
626 45.07 wind 9.0 90 < th dose independent rect. 23 12
627 45.07 precipitation 0.1 90 < th dose independent rect. 23 12
631 45.07 atmosphere 1015.0 30 < th dose dependent rect. 4 1
636 45.07 wind 5.0 30 < th dose dependent rect. 2 6
639 45.07 precipitation 0.1 90 < th dose dependent rect. 23 12
657 45.08 humidity 50.0 14400 > th dose dependent rect. 8 1
668 45.08 radiation 10.0 30 > th dose dependent rect. 16 16
672 45.09 temperature 10.0 720 > th dose independent rect. 11 2
674 45.09 atmosphere 1015.0 720 < th dose independent rect. 11 2
678 45.09 wind 5.0 30 < th dose independent rect. 2 6
686 45.09 precipitation 0.1 90 < th dose independent rect. 11 12
690 45.09 atmosphere 1000.0 30 > th dose independent rect. 8 18
691 45.09 atmosphere 1000.0 30 > th dose independent rect. 23 21
692 45.09 temperature 10.0 720 > th dose independent rect. 13 22
693 45.09 humidity 90.0 90 < th dose independent rect. 1 22
697 45.09 atmosphere 995.0 30 > th dose dependent rect. 7 1
704 45.09 precipitation 0.1 90 < th dose dependent rect. 11 12
707 45.10 precipitation 0.1 720 < th dose independent rect. 11 2
721 45.10 atmosphere 1000.0 90 > th dose independent rect. 8 11
724 45.10 precipitation 0.1 720 < th dose independent rect. 1 22
729 45.10 precipitation 0.1 720 < th dose dependent rect. 11 2
735 45.10 precipitation 0.1 720 < th dose dependent rect. 1 22
736 45.11 wind 9.0 1440 < th dose independent rect. 8 1
739 45.11 temperature 10.0 1440 > th dose independent rect. 8 1
745 45.11 humidity 50.0 1440 > th dose independent rect. 8 1
747 45.11 atmosphere 995.0 1440 > th dose independent rect. 8 1
751 45.11 atmosphere 1015.0 1440 < th dose independent rect. 8 1
752 45.11 wind 1.0 720 > th dose independent rect. 11 2
753 45.11 wind 9.0 720 < th dose independent rect. 11 2
755 45.11 atmosphere 1000.0 30 > th dose independent rect. 23 3
761 45.11 temperature 10.0 1440 > th dose independent rect. 9 23
764 45.11 wind 1.0 14400 < th dose dependent rect. 6 1
765 45.11 wind 9.0 10 < th dose dependent rect. 7 1
767 45.11 humidity 60.0 14400 < th dose dependent rect. 12 1
774 45.12 temperature 10.0 30 > th dose independent rect. 7 1
776 45.12 temperature 30.0 30 < th dose independent rect. 7 1
777 45.12 humidity 50.0 30 > th dose independent rect. 7 1
780 45.12 atmosphere 995.0 30 > th dose independent rect. 7 1
781 45.12 atmosphere 1015.0 30 < th dose independent rect. 7 1
782 45.12 precipitation 0.1 30 < th dose independent rect. 7 1
785 45.12 atmosphere 1005.0 30 > th dose independent rect. 2 6
786 45.12 atmosphere 995.0 720 > th dose independent rect. 13 7
787 45.12 temperature 30.0 720 < th dose independent rect. 15 8
791 45.12 temperature 10.0 30 > th dose independent rect. 8 23
792 45.12 humidity 80.0 14400 < th dose dependent sin 8 NA
796 45.12 precipitation 0.1 30 < th dose dependent rect. 7 1
798 45.12 radiation 10.0 14400 < th dose dependent rect. 24 3
807 45.13 atmosphere 1005.0 30 > th dose independent rect. 20 3
812 45.13 wind 1.0 720 > th dose independent rect. 15 8
814 45.13 atmosphere 1000.0 30 > th dose independent rect. 23 8
830 45.13 atmosphere 995.0 720 > th dose dependent rect. 23 2
837 45.14 humidity 90.0 30 < th dose independent rect. 20 3
838 45.14 atmosphere 1000.0 10 > th dose independent rect. 23 13
842 45.14 atmosphere 1000.0 90 > th dose independent rect. 23 16
843 45.14 humidity 50.0 720 > th dose independent rect. 20 17
844 45.14 atmosphere 995.0 720 > th dose independent rect. 8 17
867 45.15 radiation 10.0 30 < th dose independent rect. 23 9
868 45.15 precipitation 0.1 30 < th dose independent rect. 7 16
871 45.15 precipitation 0.1 30 < th dose independent rect. 5 23
880 45.15 temperature 10.0 30 > th dose dependent rect. 2 6
883 45.15 precipitation 0.1 30 < th dose dependent rect. 7 16
884 45.15 precipitation 0.1 30 < th dose dependent rect. 5 23
885 45.16 precipitation 0.1 1440 < th dose independent rect. 8 1
893 45.16 atmosphere 1000.0 30 > th dose independent rect. 17 9
897 45.16 humidity 50.0 30 > th dose independent rect. 8 18
899 45.16 precipitation 0.1 90 < th dose independent rect. 1 22
901 45.16 temperature 10.0 30 > th dose dependent rect. 7 1
905 45.16 precipitation 0.1 1440 < th dose dependent rect. 8 1
912 45.16 radiation 40.0 10 < th dose dependent rect. 23 12
915 45.16 precipitation 0.1 90 < th dose dependent rect. 1 22
918 45.17 humidity 50.0 720 > th dose independent rect. 11 2
925 45.17 temperature 10.0 1440 > th dose independent rect. 24 8
928 45.17 temperature 30.0 1440 < th dose independent rect. 24 8
932 45.17 humidity 50.0 1440 > th dose independent rect. 24 8
937 45.17 atmosphere 995.0 1440 > th dose independent rect. 24 8
938 45.17 temperature 10.0 1440 > th dose independent rect. 8 16
942 45.17 radiation 40.0 90 < th dose independent rect. 2 21
952 45.17 temperature 10.0 30 > th dose dependent rect. 23 8
959 45.18 wind 9.0 1440 < th dose independent rect. 3 6
960 45.18 temperature 10.0 1440 > th dose independent rect. 3 6
963 45.18 humidity 50.0 1440 > th dose independent rect. 3 6
967 45.18 wind 1.0 90 > th dose independent rect. 11 12
968 45.18 wind 1.0 30 > th dose independent rect. 7 16
969 45.18 humidity 90.0 30 < th dose independent rect. 7 16
970 45.18 temperature 10.0 1440 > th dose independent rect. 9 18
975 45.18 wind 9.0 30 < th dose independent rect. 8 23
991 45.18 wind 9.0 30 < th dose dependent rect. 23 23