BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0493400 Os04g0493400|AK060363
(229 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0493400 Similar to Chitinase 480 e-136
Os04g0494100 Similar to Chitinase 413 e-116
Os02g0605900 Similar to Chitinase (EC 3.2.1.14) A 283 7e-77
Os01g0287600 Similar to Seed chitinase-c 186 1e-47
Os05g0138200 Similar to Chitinase (Class II) (EC 3.2.1.14) 176 1e-44
Os06g0726100 Similar to Seed chitinase-c 163 9e-41
Os03g0418000 Similar to Basic endochitinase 2 precursor (EC... 157 7e-39
Os05g0399300 Similar to Seed chitinase-c 147 5e-36
Os05g0399400 Similar to Endochitinase precursor (EC 3.2.1.14) 146 1e-35
Os05g0399700 Chitinase (EC 3.2.1.14) 142 1e-34
L37289 142 2e-34
Os03g0132900 Similar to Chitinase (EC 3.2.1.14) (Fragment) 127 5e-30
Os10g0542900 chitinase [Oryza sativa (japonica cultivar-gro... 117 5e-27
AF001500 116 2e-26
Os08g0522500 Glycoside hydrolase, family 19 protein 99 2e-21
Os09g0494200 Similar to Chitinase-like protein (EC 3.2.1.14) 98 6e-21
Os10g0543400 Similar to chitinase [Oryza sativa (japonica c... 97 1e-20
>Os04g0493400 Similar to Chitinase
Length = 229
Score = 480 bits (1236), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MANSPTLTMLVFLAIGLSLVLSAAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFL 60
MANSPTLTMLVFLAIGLSLVLSAAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFL
Sbjct: 1 MANSPTLTMLVFLAIGLSLVLSAAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFL 60
Query: 61 NAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQ 120
NAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQ
Sbjct: 61 NAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQ 120
Query: 121 PGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVM 180
PGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVM
Sbjct: 121 PGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVM 180
Query: 181 SQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
SQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC
Sbjct: 181 SQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
>Os04g0494100 Similar to Chitinase
Length = 288
Score = 413 bits (1062), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/204 (95%), Positives = 200/204 (98%)
Query: 26 VSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAF 85
VSVESVVTEAFFNGIKNQAPNGCAGK+FYTRQSFLNAA SYSGFA DRTNDDSKREIAAF
Sbjct: 85 VSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAF 144
Query: 86 FAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKN 145
FAHVTHETGHMCYINEINGA+MDYCDK+NKQWPCQPGKKYYGRGPLQISWN+NYGPAG+N
Sbjct: 145 FAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQN 204
Query: 146 IGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAV 205
IGFDGLRDPD+VAQDPTISFKTALWFWMNNVHQVM QGFGATIRAINGALECNGKNPGAV
Sbjct: 205 IGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAINGALECNGKNPGAV 264
Query: 206 NARVNYYKDYCRQFGVSPGGNLYC 229
NARVNYYKDYCRQFGV PGGNLYC
Sbjct: 265 NARVNYYKDYCRQFGVDPGGNLYC 288
>Os02g0605900 Similar to Chitinase (EC 3.2.1.14) A
Length = 271
Score = 283 bits (724), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 133/206 (64%), Positives = 156/206 (75%), Gaps = 2/206 (0%)
Query: 26 VSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAF 85
VSV S+VT FF + QA +GCA K FYTR +FL AA Y F + DDSKREIAAF
Sbjct: 66 VSVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAF 125
Query: 86 FAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKN 145
FAH HET CYI EI+G + +YCD+++ QWPC GK YYGRGPLQISWNFNYGPAG++
Sbjct: 126 FAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQS 185
Query: 146 IGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQ--VMSQGFGATIRAINGALECNGKNPG 203
IGFDGL DPD VA+ P ++F+TALW+W NNVH V QGFGATIRAINGALEC+GKNP
Sbjct: 186 IGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPT 245
Query: 204 AVNARVNYYKDYCRQFGVSPGGNLYC 229
AV+ RV YY+ +C+QFGV PG NL C
Sbjct: 246 AVSNRVAYYQQFCQQFGVDPGSNLTC 271
>Os01g0287600 Similar to Seed chitinase-c
Length = 300
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 121/217 (55%), Gaps = 35/217 (16%)
Query: 47 GCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH----------- 95
C + FYT SF+ AA + FA D KRE+AAF A ++HET
Sbjct: 79 ACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYA 138
Query: 96 --MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRD 153
+CY EIN YCD ++KQWPC PGK Y+GRGP+QISWNFNYGPAG+ +GFDGLR+
Sbjct: 139 WGLCYKEEIN-PQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRN 197
Query: 154 PDKVAQDPTISFKTALWFWMN------NVHQVM---------------SQGFGATIRAIN 192
P+ VA I+F+TALWFWM + HQVM + GFG +N
Sbjct: 198 PEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVN 257
Query: 193 GALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
G LECN VN R+ +Y+ YC+ GV G NL C
Sbjct: 258 GGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDC 294
>Os05g0138200 Similar to Chitinase (Class II) (EC 3.2.1.14)
Length = 295
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 132/244 (54%), Gaps = 43/244 (17%)
Query: 28 VESVVTEAFFNG--IKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAF 85
V S+VTE +N ++ C ++FYT +FL AA Y F D +RE+AAF
Sbjct: 46 VSSIVTEEMYNKSLFIHKDDAACPARNFYTYAAFLRAADQYPSFGGAGGRDTRRREVAAF 105
Query: 86 FAHVTHETGH-------------MCYINEINGANMDYCDKS-NKQWPCQPGKKYYGRGPL 131
A V+HET +C+ E+ A+ +YCD + +WPC PGK Y+GRGP+
Sbjct: 106 LAQVSHETTGGWATAPDGPYTWGLCFKEELKPAS-NYCDAAVAARWPCFPGKSYHGRGPI 164
Query: 132 QISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN--------NVHQVMS-- 181
Q+SWNFNYGPAG+ +GFDGLR+P+ VA D ++FKTALWFWM + H VM+
Sbjct: 165 QLSWNFNYGPAGEAVGFDGLREPEVVAGDAVVAFKTALWFWMTPRPPSKPYSCHDVMTGR 224
Query: 182 --------------QGFGATIRAINGALECNGKNPG--AVNARVNYYKDYCRQFGVSPGG 225
GFG T ING LECN + G V R+ +++ YC GV G
Sbjct: 225 YRPSRADAAANRTAAGFGLTTNIINGGLECNNRTGGDPRVEDRIGFFRRYCGALGVDVGD 284
Query: 226 NLYC 229
NL C
Sbjct: 285 NLDC 288
>Os06g0726100 Similar to Seed chitinase-c
Length = 320
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 94/237 (39%), Positives = 124/237 (52%), Gaps = 36/237 (15%)
Query: 28 VESVVTEAFFNG-IKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 86
V S+++ + F+ + ++ CA K FYT +F+ AA +Y FA D KRE+AAF
Sbjct: 76 VASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFL 135
Query: 87 AHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQI 133
A +HET C+ E NG YC+ +WPC GKKYYGRGP+QI
Sbjct: 136 AQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEP-KPEWPCAAGKKYYGRGPIQI 194
Query: 134 SWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMS------ 181
++N+NYGPAG+ IG D L +PD VA D T+SFKTA WFWM + H V++
Sbjct: 195 TYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPS 254
Query: 182 ---------QGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
G+G ING +EC V R+ +YK YC GVS G NL C
Sbjct: 255 ADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDC 311
>Os03g0418000 Similar to Basic endochitinase 2 precursor (EC 3.2.1.14)
Length = 326
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 124/238 (52%), Gaps = 42/238 (17%)
Query: 31 VVTEAFFNGI---KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDS-KREIAAFF 86
+V+ + F+ + +N A C +FYT +F+ AA ++ GFA + D+ KRE+AAF
Sbjct: 84 IVSRSLFDQMLLHRNDA--ACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFL 141
Query: 87 AHVTHETGH-------------MCYINEINGA-NMDYCDKSNKQWPCQPGKKYYGRGPLQ 132
A +HET C+ E GA DYC +S QWPC GKKYYGRGP+Q
Sbjct: 142 AQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQS-AQWPCAAGKKYYGRGPIQ 200
Query: 133 ISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMS----- 181
+S+NFNYGPAG+ IG D L DPD VA D T+SF TA WFWM + H V +
Sbjct: 201 LSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTP 260
Query: 182 ----------QGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
G+G ING LEC V R+ +YK YC GVS NL C
Sbjct: 261 SADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDC 318
>Os05g0399300 Similar to Seed chitinase-c
Length = 338
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 123/237 (51%), Gaps = 37/237 (15%)
Query: 28 VESVVTEAFFNGIKNQAPNG-CAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 86
V S+V F + +G C + FYT ++FL AA ++ F + KRE+AAF
Sbjct: 87 VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFL 146
Query: 87 AHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQI 133
+HET C+ E N + DYC S +WPC PG+KYYGRGP+Q+
Sbjct: 147 GQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPS-DYCQPS-PEWPCAPGRKYYGRGPIQL 204
Query: 134 SWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMS------ 181
S+NFNYGPAG+ IG D L +PD VA D T+SFKTALWFWM + H V++
Sbjct: 205 SFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPS 264
Query: 182 ---------QGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
G+G +NG LEC V R+ +Y+ YC FG+ GGNL C
Sbjct: 265 PADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDC 321
>Os05g0399400 Similar to Endochitinase precursor (EC 3.2.1.14)
Length = 334
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 125/240 (52%), Gaps = 41/240 (17%)
Query: 27 SVESVVTEAFFNGI---KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIA 83
+VE+VV++ F + +N A C + FYT + + AA ++ FA ++ KRE+A
Sbjct: 85 AVEAVVSKELFEQLLLHRNDA--ACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVA 142
Query: 84 AFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGP 130
AF +HET C+ EI GA YC S +WPC P KKY+GRGP
Sbjct: 143 AFLGQTSHETTGGWATAPDGPYSWGYCFKEEI-GATASYCVPS-AEWPCAPDKKYFGRGP 200
Query: 131 LQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMS--- 181
+Q+S+N+NYGPAG+ IG D L +P+ VA DP +SFKTALWFWM + H V++
Sbjct: 201 IQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQW 260
Query: 182 ------------QGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
G+G ING LEC V R+ +Y+ YC G+ G NL C
Sbjct: 261 TPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 320
>Os05g0399700 Chitinase (EC 3.2.1.14)
Length = 340
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 131/244 (53%), Gaps = 36/244 (14%)
Query: 18 SLVLSAAG---VSVESVVT-EAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDR 73
+++L+A G V SVVT + F + ++ C + FY ++F+ AA ++ FA
Sbjct: 84 AVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATG 143
Query: 74 TNDDSKREIAAFFAHVTHETGH------MCYINEINGANMDYCDKSNKQWPCQPGKKYYG 127
D KRE+AAF A +H T CY E+ GA D+C N +WPC PGK Y+
Sbjct: 144 DADTRKREVAAFLAQTSHATSGGPYSWGYCY-KEVKGATSDFC-VPNARWPCAPGKAYHA 201
Query: 128 RGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN-------NVHQVM 180
RGP+QI++N+NYG AG+ IG D L +P+ VA DPT++FKTALW WM + H V+
Sbjct: 202 RGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVV 261
Query: 181 S---------------QGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGG 225
+ G+G T + G L+C G N GA RV +YK YC GV G
Sbjct: 262 TGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGP 319
Query: 226 NLYC 229
NL C
Sbjct: 320 NLDC 323
>L37289
Length = 333
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 124/240 (51%), Gaps = 41/240 (17%)
Query: 27 SVESVVTEAFFNGI---KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIA 83
+VE+VV++ F + +N A C + FYT +F+ AA ++ FA ++ KRE+A
Sbjct: 84 AVEAVVSKELFEQLLLHRNDA--ACPARGFYTYDAFVTAAAAFPDFAATGDDEARKREVA 141
Query: 84 AFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGP 130
AF +HET C+ EI A YC S +WPC KKY+GRGP
Sbjct: 142 AFLGQTSHETTGGWATAPDGPYSWGYCFKEEIAAA-ASYCVAS-AEWPCAADKKYFGRGP 199
Query: 131 LQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMS--- 181
+Q+S+N+NYGPAG+ IG D L +P+ VA DP +SFKTALWFWM + H V++
Sbjct: 200 IQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQW 259
Query: 182 ------------QGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
G+G ING LEC V R+ +Y+ YC G+ G NL C
Sbjct: 260 TPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 319
>Os03g0132900 Similar to Chitinase (EC 3.2.1.14) (Fragment)
Length = 267
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 126/253 (49%), Gaps = 36/253 (14%)
Query: 7 LTMLVFLAIGLSLVLSAAG------VSVESVVTEAFFNG-IKNQAPNGCAGKSFYTRQSF 59
+ L+ LA G +L+++AAG V S++T A F + ++ GC G +FYT +F
Sbjct: 12 MRRLLPLA-GATLLIAAAGGASGQQAGVGSIITRAMFESMLSHRGDQGCQG-AFYTYDAF 69
Query: 60 LNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPC 119
+ AA + F ++ +RE+AAFF +HET YC + N+ P
Sbjct: 70 IKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYC-RVNEITPS 128
Query: 120 QPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN----- 174
P YYGRGP+Q++ +NY AG +G D + +PD V+ DP ++F+TA+WFWM
Sbjct: 129 DP--PYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPK 186
Query: 175 -NVHQVMSQ---------------GFGATIRAINGALECNGKNPGAVNA--RVNYYKDYC 216
+ H V++ G+G ING EC GK NA RV YYK YC
Sbjct: 187 PSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEEC-GKGYSTDNAKDRVGYYKRYC 245
Query: 217 RQFGVSPGGNLYC 229
F V G N+ C
Sbjct: 246 DMFRVGYGDNIAC 258
>Os10g0542900 chitinase [Oryza sativa (japonica cultivar-group)]
Length = 261
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 111/226 (49%), Gaps = 32/226 (14%)
Query: 30 SVVTEAFFNG-IKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDD-SKREIAAFFA 87
SV+T+A FN + N+ + C + FYT +F+ AA S+ F + + +RE+AAFF
Sbjct: 34 SVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFG 93
Query: 88 HVTHET--GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKN 145
+HET G ++ YC K P YYGRGP+Q++ NY AG
Sbjct: 94 QTSHETTGGTRGSSDQFQ---WGYCFKEEINKATSP--PYYGRGPIQLTGQSNYQAAGNA 148
Query: 146 IGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVM---------------SQGF 184
+G D + +PD V+ D +SFKTA+WFWM + H V+ G+
Sbjct: 149 LGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGY 208
Query: 185 GATIRAINGALECN-GKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
G ING +EC G+N V+ R+ YYK YC G G NL C
Sbjct: 209 GVITNIINGGIECGVGQNDANVD-RIGYYKRYCDMLGAGYGSNLDC 253
>AF001500
Length = 258
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 110/228 (48%), Gaps = 32/228 (14%)
Query: 28 VESVVTEAFFNG-IKNQAPNGCAGKSFYTRQSFLNAARSYSGFAN-DRTNDDSKREIAAF 85
V SV+T+A FN + N+ + C FYT +F+ AA S+ A S+RE+AAF
Sbjct: 28 VGSVITQAVFNSMLPNRDNSQCPATGFYTSSAFIAAANSFRRSARAGGAPSSSRRELAAF 87
Query: 86 FAHVTHET--GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAG 143
F +HET G ++ YC K P YYGRGP+Q++ NY AG
Sbjct: 88 FGQTSHETTGGTRGSSDQFQ---WGYCFKEEINKATSP--PYYGRGPIQLTGQSNYQAAG 142
Query: 144 KNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVM---------------SQ 182
+G D + +PD V+ D +SFKTA+WFWM + H V+
Sbjct: 143 NALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKASCHDVILGRWTRPGGETTAGRVP 202
Query: 183 GFGATIRAINGALECN-GKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
G+G ING +EC G+N V+ R+ YYK YC G G NL C
Sbjct: 203 GYGVITNIINGGIECGVGQNDANVD-RIGYYKRYCDMLGTGYGSNLDC 249
>Os08g0522500 Glycoside hydrolase, family 19 protein
Length = 316
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 41/217 (18%)
Query: 53 FYTRQSFLNAARSYS--GFANDRTNDDSKREIAAFFAHVTHETG-------------HMC 97
F+ +F+ AA + GF + +E+AAF HV +T +C
Sbjct: 86 FWDYHAFITAAALFEPRGFGTTGGKEVGMKEVAAFLGHVGAKTSCGYSVATGGPLAWGLC 145
Query: 98 YINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKV 157
Y +E++ + YCD SN+ +PC G +YYGRG L + WN+NYG G+ I D L P+ +
Sbjct: 146 YNHELS-PSQSYCDNSNELYPCVEGVEYYGRGALPVYWNYNYGIIGQGIKQDLLNHPELL 204
Query: 158 AQDPTISFKTALWFWMN-------NVHQVMS---------------QGFGATIRAINGAL 195
Q+ T++F+ A+W WM + H V GFGAT+ + G L
Sbjct: 205 EQNATLAFEAAIWRWMTPMKRKQPSAHDVFVGNWKPTKNDTLSKRYPGFGATMNILYGDL 264
Query: 196 ECNGKNPGAVNARVNYYKDYCRQFGV---SPGGNLYC 229
C + +N V++Y+ Y GV G NL C
Sbjct: 265 ICGQGSIDKMNVIVSHYQHYLDLMGVGSDKAGDNLDC 301
>Os09g0494200 Similar to Chitinase-like protein (EC 3.2.1.14)
Length = 326
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 53 FYTRQSFLNAARSYS--GFANDRTNDDSKREIAAFFAHVTHETG-------------HMC 97
F+ QSF+ AA + GF E+ AF HV +T +C
Sbjct: 91 FWDYQSFITAAALFEPLGFCTTGGKQMQMMELCAFLGHVGSKTSCGFGVATGGPTAWGLC 150
Query: 98 YINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKV 157
Y +E++ DYCDK+N Q+PC G +YYGRG + + WN+NYG AG I D L P+ +
Sbjct: 151 YNHEMS-PKEDYCDKTNLQYPCVEGAEYYGRGAIPVFWNYNYGAAGDGIHEDLLHHPEYL 209
Query: 158 AQDPTISFKTALWFWMN-------NVHQVMS---------------QGFGATIRAINGAL 195
Q+ T++F A+W WM + H V GFGAT+ + G
Sbjct: 210 EQNATMAFMAAMWRWMTPMKKKQPSAHDVFVGNWKPTKNDTLAKRLPGFGATMNVLYGDQ 269
Query: 196 ECNGKNPGAVNARVNYYKDYCRQFGV 221
C +N +++Y+ Y GV
Sbjct: 270 ICGKGYIDDMNVIISHYQYYLDLMGV 295
>Os10g0543400 Similar to chitinase [Oryza sativa (japonica cultivar-group)]
Length = 296
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 110/253 (43%), Gaps = 57/253 (22%)
Query: 30 SVVTEAFFNG-IKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDD-SKREIAAFFA 87
SV+TEA FN + N+ + C + FYT +F+ AA S+ F + + +RE+AAFF
Sbjct: 37 SVITEAVFNSMLPNRDNSLCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFG 96
Query: 88 HVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQIS------------- 134
+HET + YC K P YYGRGP+Q++
Sbjct: 97 QTSHETTDGTR-GSSDQFQWGYCFKEEINKATSP--PYYGRGPIQLTGFFIINTYMFLNF 153
Query: 135 ---------WNFNYG------PAGKNIGFDGL-RDPDKVAQDPTISFKTALWFWMN---- 174
++ NY P+ + G R PD V+ + +SFKTA+WFWM
Sbjct: 154 ATSLAVYYPYSINYESHAIELPSSQERAGAGPGRRPDLVSTNAVVSFKTAIWFWMTGQYN 213
Query: 175 --NVHQVM---------------SQGFGATIRAINGALECN-GKNPGAVNARVNYYKDYC 216
+ H V+ G+G ING EC+ G+N V+ R+ YYK YC
Sbjct: 214 KPSSHDVILGRWTPSAADTAAGRVPGYGVITNIINGRFECDVGQNDANVD-RIGYYKRYC 272
Query: 217 RQFGVSPGGNLYC 229
G PG NL C
Sbjct: 273 DMLGADPGSNLDC 285
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,171,092
Number of extensions: 327311
Number of successful extensions: 533
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 503
Number of HSP's successfully gapped: 17
Length of query: 229
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 132
Effective length of database: 11,971,043
Effective search space: 1580177676
Effective search space used: 1580177676
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)