BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0833300 Os03g0833300|AK069847
(969 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0833300 Similar to Squamosa-promoter binding-like prot... 1783 0.0
Os01g0292900 Similar to Squamosa-promoter binding-like prot... 413 e-115
Os05g0408200 SBP domain containing protein 123 5e-28
Os06g0659100 Similar to Squamosa-promoter binding protein 1 102 2e-21
Os08g0513700 Hypothetical protein 101 2e-21
Os04g0551500 SBP domain containing protein 101 2e-21
Os06g0703500 Similar to SBP-domain protein 5 (Fragment) 97 5e-20
Os08g0531600 Similar to Squamosa-promoter binding-like prot... 97 7e-20
Os08g0509600 Similar to Squamosa-promoter binding-like prot... 96 9e-20
Os09g0507100 Similar to Squamosa-promoter binding-like prot... 96 1e-19
Os04g0656500 Similar to Squamosa-promoter binding-like prot... 95 2e-19
Os02g0174100 SBP domain containing protein 94 5e-19
Os02g0177300 Similar to Squamosa-promoter binding protein 1 89 1e-17
Os07g0505200 Similar to SBP-domain protein 6 (Fragment) 81 3e-15
Os01g0922600 Similar to SBP-domain protein 4 81 4e-15
Os11g0496700 73 9e-13
Os09g0491532 Similar to Squamosa-promoter binding protein 2 70 8e-12
>Os03g0833300 Similar to Squamosa-promoter binding-like protein 8
Length = 969
Score = 1783 bits (4617), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 872/969 (89%), Positives = 872/969 (89%)
Query: 1 MEAARVGAQSRHLYGGGLGEPDMDRRDKRLFGWDLNDWRWDSDRFVATPVPAAEXXXXXX 60
MEAARVGAQSRHLYGGGLGEPDMDRRDKRLFGWDLNDWRWDSDRFVATPVPAAE
Sbjct: 1 MEAARVGAQSRHLYGGGLGEPDMDRRDKRLFGWDLNDWRWDSDRFVATPVPAAEASGLAL 60
Query: 61 XXXXXXXXXXXXXXVRNVNARGDSDKRKRXXXXXXXXXXXXXXXXNGGGSLSLRIXXXXX 120
VRNVNARGDSDKRKR NGGGSLSLRI
Sbjct: 61 NSSPSSSEEAGAASVRNVNARGDSDKRKRVVVIDDDDVEDDELVENGGGSLSLRIGGDAV 120
Query: 121 XXXXXXXXXXXEEDRNGKKIRVQGGSPSGPACQVEGCTADLTGVRDYHRRHKVCEMHAKA 180
EEDRNGKKIRVQGGSPSGPACQVEGCTADLTGVRDYHRRHKVCEMHAKA
Sbjct: 121 AHGAGVGGGADEEDRNGKKIRVQGGSPSGPACQVEGCTADLTGVRDYHRRHKVCEMHAKA 180
Query: 181 TTAVVGNTVQRFCQQCSRFHPLQEFDEGKRSCXXXXXXXXXXXXKTRPEVAVGGSAFTED 240
TTAVVGNTVQRFCQQCSRFHPLQEFDEGKRSC KTRPEVAVGGSAFTED
Sbjct: 181 TTAVVGNTVQRFCQQCSRFHPLQEFDEGKRSCRRRLAGHNRRRRKTRPEVAVGGSAFTED 240
Query: 241 KISSYXXXXXXXVCANLNADNAEHLRGQELISGLLRNLGAVAKSLDPKELCKLLEACQSM 300
KISSY VCANLNADNAEHLRGQELISGLLRNLGAVAKSLDPKELCKLLEACQSM
Sbjct: 241 KISSYLLLGLLGVCANLNADNAEHLRGQELISGLLRNLGAVAKSLDPKELCKLLEACQSM 300
Query: 301 QDGSNAGTSETANALVNTAVAEAAGPSNSKMPFVNGDQCGLAXXXXXXXXXXXXXXATPD 360
QDGSNAGTSETANALVNTAVAEAAGPSNSKMPFVNGDQCGLA ATPD
Sbjct: 301 QDGSNAGTSETANALVNTAVAEAAGPSNSKMPFVNGDQCGLASSSVVPVQSKSPTVATPD 360
Query: 361 PPACKFKDFDLNDTYGGMEGFEDGYEGSPTPAFKTTDSPNCPSWMHQDSTQSPPQTSGNX 420
PPACKFKDFDLNDTYGGMEGFEDGYEGSPTPAFKTTDSPNCPSWMHQDSTQSPPQTSGN
Sbjct: 361 PPACKFKDFDLNDTYGGMEGFEDGYEGSPTPAFKTTDSPNCPSWMHQDSTQSPPQTSGNS 420
Query: 421 XXXXXXXXXXXNGDAQCRTDKIVFKLFEKVPSDLPPVLRSQILGWLSSSPTDIESYIRPG 480
NGDAQCRTDKIVFKLFEKVPSDLPPVLRSQILGWLSSSPTDIESYIRPG
Sbjct: 421 DSTSAQSLSSSNGDAQCRTDKIVFKLFEKVPSDLPPVLRSQILGWLSSSPTDIESYIRPG 480
Query: 481 CIILTVYLRLVESAWKELSDNMSSYLDKLLNSSTGNFWASGLVFVMVRHQIAFMHNGQLM 540
CIILTVYLRLVESAWKELSDNMSSYLDKLLNSSTGNFWASGLVFVMVRHQIAFMHNGQLM
Sbjct: 481 CIILTVYLRLVESAWKELSDNMSSYLDKLLNSSTGNFWASGLVFVMVRHQIAFMHNGQLM 540
Query: 541 LDRPLANSAHHYCKILCVRPIAAPFSTKVNFRVEGLNLVSDSSRLICSFEGSCIFQEDTD 600
LDRPLANSAHHYCKILCVRPIAAPFSTKVNFRVEGLNLVSDSSRLICSFEGSCIFQEDTD
Sbjct: 541 LDRPLANSAHHYCKILCVRPIAAPFSTKVNFRVEGLNLVSDSSRLICSFEGSCIFQEDTD 600
Query: 601 NIVDDVEHDDIEYLNFCCPLPSSRGRGFVEVEDGGFSNGFFPFIIAEQDICSEVCELESI 660
NIVDDVEHDDIEYLNFCCPLPSSRGRGFVEVEDGGFSNGFFPFIIAEQDICSEVCELESI
Sbjct: 601 NIVDDVEHDDIEYLNFCCPLPSSRGRGFVEVEDGGFSNGFFPFIIAEQDICSEVCELESI 660
Query: 661 FESSSHEQADDDNARNQALEFLNELGWLLHRANIISKQDKVPLASFNIWRFRNLGIFAME 720
FESSSHEQADDDNARNQALEFLNELGWLLHRANIISKQDKVPLASFNIWRFRNLGIFAME
Sbjct: 661 FESSSHEQADDDNARNQALEFLNELGWLLHRANIISKQDKVPLASFNIWRFRNLGIFAME 720
Query: 721 REWCAVTKLLLDFLFTGLVDIGSQSPEEVVLSENLLHAAVRMKSAQMVRFLLGYKPNESL 780
REWCAVTKLLLDFLFTGLVDIGSQSPEEVVLSENLLHAAVRMKSAQMVRFLLGYKPNESL
Sbjct: 721 REWCAVTKLLLDFLFTGLVDIGSQSPEEVVLSENLLHAAVRMKSAQMVRFLLGYKPNESL 780
Query: 781 KRTAETFLFRPDAQGPSKFTPLHIAAATDDAEDVLDALTNDPGLVGINTWRNARDGAGFT 840
KRTAETFLFRPDAQGPSKFTPLHIAAATDDAEDVLDALTNDPGLVGINTWRNARDGAGFT
Sbjct: 781 KRTAETFLFRPDAQGPSKFTPLHIAAATDDAEDVLDALTNDPGLVGINTWRNARDGAGFT 840
Query: 841 PEDYARQRGNDAYLNMVEKKINKHLGKGHVVLGVPSSIHPVITDGVKPGEVSLEIGMTVP 900
PEDYARQRGNDAYLNMVEKKINKHLGKGHVVLGVPSSIHPVITDGVKPGEVSLEIGMTVP
Sbjct: 841 PEDYARQRGNDAYLNMVEKKINKHLGKGHVVLGVPSSIHPVITDGVKPGEVSLEIGMTVP 900
Query: 901 PPAPSCNACSRQALMYPNSTARTFLYRPAMLTVMGIAVICVCVGLLLHTCPKVYAAPTFR 960
PPAPSCNACSRQALMYPNSTARTFLYRPAMLTVMGIAVICVCVGLLLHTCPKVYAAPTFR
Sbjct: 901 PPAPSCNACSRQALMYPNSTARTFLYRPAMLTVMGIAVICVCVGLLLHTCPKVYAAPTFR 960
Query: 961 WELLERGPM 969
WELLERGPM
Sbjct: 961 WELLERGPM 969
>Os01g0292900 Similar to Squamosa-promoter binding-like protein 2
Length = 862
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/554 (41%), Positives = 325/554 (58%), Gaps = 24/554 (4%)
Query: 438 RTDKIVFKLFEKVPSDLPPVLRSQILGWLSSSPTDIESYIRPGCIILTVYLRLVESAWKE 497
RTDKIVFKLF K P+D P LR+QIL WLS+ P+DIESYIRPGCIILT+Y+RL W +
Sbjct: 309 RTDKIVFKLFGKEPNDFPSDLRAQILSWLSNCPSDIESYIRPGCIILTIYMRLPNWMWDK 368
Query: 498 LSDNMSSYLDKLLNSSTGNFWASGLVFVMVRHQIAFMHNGQLMLDRPLANSAHHYCKILC 557
L+ + + ++ KL++ ST W +G ++ V+ + NG LML P + + +IL
Sbjct: 369 LAADPAHWIQKLISLSTDTLWRTGWMYARVQDYLTLSCNGNLMLASPWQPAIGNKHQILF 428
Query: 558 VRPIAAPFSTKVNFRVEGLNLVSDSSRLICSFEGSCIFQEDTDNIVDDVE-HDDIEYLNF 616
+ PIA S+ NF V+GLN+ +++L+C F G + QE T+ ++DD + + L F
Sbjct: 429 ITPIAVACSSTANFSVKGLNIAQPTTKLLCIFGGKYLIQEATEKLLDDTKMQRGPQCLTF 488
Query: 617 CCPLPSSRGRGFVEVEDGGFSNGFFPFIIAEQDICSEVCELESI-----FESSSHEQADD 671
C PS+ GRGF+EVED S+ FPF++AE+D+CSE+ LE + F+ + E+ D
Sbjct: 489 SCSFPSTSGRGFIEVEDLDQSSLSFPFVVAEEDVCSEIRTLEHLLNLVSFDDTLVEKNDL 548
Query: 672 DNARNQALEFLNELGWLLHRANI--ISKQDKVPLASFNIWRFRNLGIFAMEREWCAVTKL 729
+R++AL FL+E GW L R++I S+ K F RFR L FA++RE+CAV K
Sbjct: 549 LASRDRALNFLHEFGWFLQRSHIRATSETPKDCTEGFPAARFRWLLSFAVDREFCAVIKK 608
Query: 730 LLDFLFTGLVDIGSQSPEEVVLSENLLHAAVRMKSAQMVRFLLGYKPNESLKRTAET--- 786
LLD LF G VD+ QS E VL ++L+ AV +S ++ FLL Y + + E+
Sbjct: 609 LLDTLFQGGVDLDVQSTVEFVLKQDLVFVAVNKRSKPLIDFLLTYTTSSAPMDGTESAAP 668
Query: 787 --FLFRPDAQGPSKFTPLHIAAATDDAEDVLDALTNDPGLVGINTWRNARDGAGFTPEDY 844
FLF PD GPS TPLHIAA D VLDALT+DP +GI W+NARD G TPEDY
Sbjct: 669 AQFLFTPDIAGPSDITPLHIAATYSDTAGVLDALTDDPQQLGIKAWKNARDATGLTPEDY 728
Query: 845 ARQRGNDAYLNMVEKKINKHLGKGHVVLGVP--------SSIHPVITDGVKPGEVSLEIG 896
AR+RG+++Y+ MV+ KI+ L K HV + + + H + +E G
Sbjct: 729 ARKRGHESYIEMVQNKIDSRLPKAHVSVTISSTTSTTDFTEKHASQSKTTDQTAFDVEKG 788
Query: 897 MTVPPPAP-SCNACSRQALMYPNSTARTFLYRPAMLTVMGIAVICVCVGLLLHTCPKVYA 955
+ P SC C + L Y + R RPA+L+++ IA +CVCVGL++ P +
Sbjct: 789 QQISTKPPLSCRQCLPE-LAYRHHLNRFLSTRPAVLSLVAIAAVCVCVGLIMQGPPHIGG 847
Query: 956 AP-TFRWELLERGP 968
FRW L GP
Sbjct: 848 MRGPFRWNSLRSGP 861
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 146 SPSGPACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEF 205
S SGP CQV+GCT +L+ RDY++RHKVCE+H K+ + N RFCQQCSRFH LQEF
Sbjct: 101 SSSGPCCQVDGCTVNLSSARDYNKRHKVCEVHTKSGVVRIKNVEHRFCQQCSRFHFLQEF 160
Query: 206 DEGKRSCXXXXXXXXXXXXKTRPEVAVGGSAFTED-KISSYXXXXXXXVCANLNADNAEH 264
DEGK+SC K + + V ++ E+ +S+ + ++ +E
Sbjct: 161 DEGKKSCRSRLAQHNRRRRKVQVQAGVDVNSLHENHSLSNTLLLLLKQLSGLDSSGPSEQ 220
Query: 265 LRGQELISGLLRNLGAVAKSLDPKELCK 292
+ G ++ L++NL A+A + +++ K
Sbjct: 221 INGPNYLTNLVKNLAALAGTQRNQDMLK 248
>Os05g0408200 SBP domain containing protein
Length = 842
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 166/361 (45%), Gaps = 43/361 (11%)
Query: 435 AQCRTDKIVFKLFEKVPSDLPPVLRSQILGWLSSSPTDIESYIRPGCIILTVYLRLVESA 494
+ C T ++ FKL++ P++ P LR QI WLSS P ++E YIRPGC ILTV++ + +
Sbjct: 358 SSCPTGRVSFKLYDWNPAEFPRRLRHQIFEWLSSMPVELEGYIRPGCTILTVFVAMPQHM 417
Query: 495 WKELSDNMSSYLDKLLNSSTGNFWASGLVFVMVRHQI-------AFMHNGQLMLDRPLAN 547
W +LS++ + + L+N+ G F+ V + I A + + +L + P +
Sbjct: 418 WDKLSEDTGNLVKSLVNAPNSLLLGKGAFFIHVNNMIFQVLKDGATLTSTRLEVQSPRIH 477
Query: 548 SAHHYC--------KILCVRPIAAP-FSTKVNFRVEGLNLVSDSSRLICSFEGSCIFQED 598
H ILC + P F + V+F +GL L D R++ CI
Sbjct: 478 YVHPSWFEAGKPIDLILCGSSLDQPKFRSLVSF--DGLYLKHDCRRILSHETFDCI---G 532
Query: 599 TDNIVDDVEHDDIEYLNFCCPLPSSRGRGFVEVEDG-GFSNGFFPFIIAEQDICSEVCEL 657
+ + D +H +I +N + G FVEVE+ G SN F P ++ + +CSE+ ++
Sbjct: 533 SGEHILDSQH-EIFRINITTSKLDTHGPAFVEVENMFGLSN-FVPILVGSKHLCSELEQI 590
Query: 658 ESIFESSSHEQADDDNAR----NQALEFLNELGWLLHRANIISKQDKVPLASFNIWRFRN 713
SS +D R L FL ++GWL+ + +I F+N
Sbjct: 591 HDALCGSSDISSDPCELRGLRQTAMLGFLIDIGWLIRKPSID--------------EFQN 636
Query: 714 LGIFAMEREWCAVTKLLLDFLFTGLVDIGSQSPEEVVLSENLLHAAVRMKSAQMVRFLLG 773
L A + W + K L+ F +++I S + ++ SE LL + + V LG
Sbjct: 637 LLSLANIQRWICMMKFLIQNDFINVLEIIVNSLDNIIGSE-LLSNLEKGRLENHVTEFLG 695
Query: 774 Y 774
Y
Sbjct: 696 Y 696
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%)
Query: 146 SPSGPACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEF 205
+P+ CQV GC AD+ ++ YHRRH+VC A A ++ +R+CQQC +FH L +F
Sbjct: 165 TPAEMKCQVPGCEADIRELKGYHRRHRVCLRCAHAAAVMLDGVQKRYCQQCGKFHILLDF 224
Query: 206 DEGKRSC 212
DE KRSC
Sbjct: 225 DEDKRSC 231
>Os06g0659100 Similar to Squamosa-promoter binding protein 1
Length = 426
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 46/63 (73%)
Query: 150 PACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGK 209
P CQ EGC ADL+G + YHRRHKVCE HAKA+ QRFCQQCSRFH L EFDE K
Sbjct: 179 PRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFHVLTEFDEAK 238
Query: 210 RSC 212
RSC
Sbjct: 239 RSC 241
>Os08g0513700 Hypothetical protein
Length = 160
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 2/148 (1%)
Query: 432 NGDAQCRTDKIVFKLFEKVPSDLPPVLRSQILGWLSSSPTDIESYIRPGCIILTVYLRLV 491
N D Q RT +I+FKLF K PS +P LR +I+ WL SP ++E YIRPGC++L++YL +
Sbjct: 10 NSDGQDRTGRIIFKLFGKEPSTIPGNLRGEIVNWLKHSPNEMEGYIRPGCLVLSMYLSMP 69
Query: 492 ESAWKELSDNMSSYLDKLLNSSTGNFWASGLVFVMVRHQIAFMHNGQLMLDRPLANSAHH 551
AW EL +N+ ++ L+ S +FW G V Q+ +G L + + +
Sbjct: 70 AIAWDELEENLLQRVNTLVQGSDLDFWRKGRFLVRTDAQLVSYKDGATRLSK--SWRTWN 127
Query: 552 YCKILCVRPIAAPFSTKVNFRVEGLNLV 579
++ V PIA K + ++G NL
Sbjct: 128 TPELTFVSPIAVVGGRKTSLILKGRNLT 155
>Os04g0551500 SBP domain containing protein
Length = 360
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 55/79 (69%)
Query: 134 DRNGKKIRVQGGSPSGPACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFC 193
D+ +K + P P CQVEGC L GV++YHRRHKVCE+HAKA VV T QRFC
Sbjct: 90 DQGKRKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFC 149
Query: 194 QQCSRFHPLQEFDEGKRSC 212
QQCSRFH L EFD+ K+SC
Sbjct: 150 QQCSRFHVLAEFDDAKKSC 168
>Os06g0703500 Similar to SBP-domain protein 5 (Fragment)
Length = 475
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%)
Query: 138 KKIRVQGGSPSGPACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCS 197
KK++V S CQVEGC DL+ R+YHR+HKVCE H+KA +V +RFCQQCS
Sbjct: 166 KKMKVSQQSTQSSYCQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCS 225
Query: 198 RFHPLQEFDEGKRSC 212
RFH L EFD+ K+SC
Sbjct: 226 RFHGLAEFDQKKKSC 240
>Os08g0531600 Similar to Squamosa-promoter binding-like protein 3
Length = 455
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 50/80 (62%)
Query: 150 PACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGK 209
P+C V+GC DL+ RDYHRRHKVCE H+K VV RFCQQCSRFH LQEFDE K
Sbjct: 116 PSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSGREMRFCQQCSRFHLLQEFDEAK 175
Query: 210 RSCXXXXXXXXXXXXKTRPE 229
RSC K +P+
Sbjct: 176 RSCRKRLDGHNRRRRKPQPD 195
>Os08g0509600 Similar to Squamosa-promoter binding-like protein 8
Length = 417
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 49/61 (80%)
Query: 152 CQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGKRS 211
CQVEGC ADL+G+++Y+ RHKVC MH+KA VV QRFCQQCSRFH L EFD+GKRS
Sbjct: 104 CQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRS 163
Query: 212 C 212
C
Sbjct: 164 C 164
>Os09g0507100 Similar to Squamosa-promoter binding-like protein 11
Length = 472
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 55/96 (57%)
Query: 150 PACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGK 209
P+C V+GC ADL+ RDYHRRHKVCE H+K VV RFCQQCSRFH L EFDE K
Sbjct: 113 PSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAK 172
Query: 210 RSCXXXXXXXXXXXXKTRPEVAVGGSAFTEDKISSY 245
RSC K + + GS T + + +
Sbjct: 173 RSCRKRLDGHNRRRRKPQADSMSSGSFMTSQQGTRF 208
>Os04g0656500 Similar to Squamosa-promoter binding-like protein 3
Length = 416
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 150 PACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVV-GNTVQRFCQQCSRFHPLQEFDEG 208
P CQ EGC ADL+ + YHRRHKVCE H+KA V G QRFCQQCSRFH L EFD+
Sbjct: 183 PRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFDDA 242
Query: 209 KRSCXXXXXXXXXXXXKTRP----------EVAVGGSAFTEDKISS 244
K+SC K++P SA T+DK S
Sbjct: 243 KKSCRKRLADHNRRRRKSKPSDGEHSGEKRRAQANKSAATKDKAGS 288
>Os02g0174100 SBP domain containing protein
Length = 251
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 46/61 (75%)
Query: 152 CQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGKRS 211
CQVEGC +L GV+DYHR+H+VCE H+K VV +RFCQQCSRFH L EFD+ KRS
Sbjct: 68 CQVEGCGVELVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFDQKKRS 127
Query: 212 C 212
C
Sbjct: 128 C 128
>Os02g0177300 Similar to Squamosa-promoter binding protein 1
Length = 458
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 45/63 (71%)
Query: 150 PACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGK 209
P CQ EGC ADL+ + YHRRHKVC+ HAKA + QRFCQQCSRFH L EFDE K
Sbjct: 195 PRCQAEGCKADLSAAKHYHRRHKVCDFHAKAAAVLAAGKQQRFCQQCSRFHVLAEFDEAK 254
Query: 210 RSC 212
RSC
Sbjct: 255 RSC 257
>Os07g0505200 Similar to SBP-domain protein 6 (Fragment)
Length = 216
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 50/90 (55%)
Query: 152 CQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGKRS 211
CQVE C DL+ Y+RRHKVC+ H+K +V QRFCQQCSRFH L EFD+ KRS
Sbjct: 110 CQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRS 169
Query: 212 CXXXXXXXXXXXXKTRPEVAVGGSAFTEDK 241
C K+ + A G + D+
Sbjct: 170 CRRRLAGHNERRRKSAADTAHGENCRHADQ 199
>Os01g0922600 Similar to SBP-domain protein 4
Length = 311
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 43/74 (58%)
Query: 164 VRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGKRSCXXXXXXXXXXX 223
VRDYHRRHKVCE H+K V QRFCQQCSRFH L EFDE KRSC
Sbjct: 4 VRDYHRRHKVCEAHSKTAVVTVAGQQQRFCQQCSRFHLLGEFDEEKRSCRKRLDGHNKRR 63
Query: 224 XKTRPEVAVGGSAF 237
K +P+ G+ F
Sbjct: 64 RKPQPDPLNPGNLF 77
>Os11g0496700
Length = 162
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 35/48 (72%)
Query: 151 ACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSR 198
AC V+GC +DL+ RDYHRRHKVCE HAK VV QRFCQQCSR
Sbjct: 115 ACSVDGCRSDLSRCRDYHRRHKVCEAHAKTPVVVVAGQEQRFCQQCSR 162
>Os09g0491532 Similar to Squamosa-promoter binding protein 2
Length = 323
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 33/47 (70%)
Query: 166 DYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFDEGKRSC 212
D H RHKVC MHAK VV QRFCQQCSRFH L EFD+ K+SC
Sbjct: 18 DVHGRHKVCYMHAKEPIVVVAGLEQRFCQQCSRFHQLPEFDQEKKSC 64
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 33,299,682
Number of extensions: 1419497
Number of successful extensions: 3286
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 3275
Number of HSP's successfully gapped: 19
Length of query: 969
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 859
Effective length of database: 11,292,261
Effective search space: 9700052199
Effective search space used: 9700052199
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)