Os06g0703500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to SBP-domain protein 5 (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os06g0703500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to SBP-domain protein 5 (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.03 | 0.552 | 10.3 | 0.0848 | 2.79 | -4.03 | 1.45 | -13.6 | 0.539 | 23.1 | 39.21 | 4320 | 18 | 9.2 |
| 153.18 | 0.576 | 9.87 | -0.883 | 2.64 | -3.12 | 0.285 | -- | 0.365 | 23.4 | 51.2 | 47520 | 18.5 | 8.06 |
| 142.86 | 0.557 | 10.3 | -0.0737 | 2.66 | -3.75 | -- | -12.8 | 0.514 | 23.1 | 26.91 | 4320 | 18 | 9.03 |
| 138.24 | 0.548 | 9.9 | -1.41 | 2.36 | -2.66 | -- | -- | 0.0255 | 23.1 | 4.882 | 47520 | 18.4 | 9.6 |
| 519.09 | 1.07 | 9.78 | -2.09 | -- | 1.27 | -- | -0.508 | 0.466 | -- | 26.91 | 4320 | 18 | 9.03 |
| 348.69 | 0.875 | 9.82 | -2.17 | 2.33 | -- | 0.0813 | -- | 0.51 | 23.5 | -- | -- | -- | -- |
| 348.72 | 0.874 | 9.82 | -2.17 | 2.33 | -- | -- | -- | 0.51 | 23.5 | -- | -- | -- | -- |
| 347.62 | 0.868 | 9.75 | -2.46 | -- | 2.08 | -- | -- | 0.603 | -- | 119.7 | 1567 | 16.4 | 12.8 |
| 178.04 | 0.621 | 9.86 | -- | 2.52 | -3.01 | -- | -- | 0.459 | 23 | 57.9 | 47520 | 18.4 | 9.62 |
| 688.43 | 1.23 | 9.76 | -2.11 | -- | -- | -- | -- | 0.535 | -- | -- | -- | -- | -- |
| 472.65 | 1.02 | 9.76 | -- | 2.3 | -- | -- | -- | 0.751 | 23.5 | -- | -- | -- | -- |
| 473.74 | 1.01 | 9.69 | -- | -- | 1.98 | -- | -- | 0.813 | -- | 200.6 | 1582 | 16.3 | 12.8 |
| 805.36 | 1.32 | 9.71 | -- | -- | -- | -- | -- | 0.769 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.75 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 3 | 130.98 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 5 | 131.49 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 6 | 131.77 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 9 | 132.06 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 15 | 132.12 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 19 | 132.14 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 22 | 132.27 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 42 | 132.65 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 67 | 134.30 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 68 | 134.40 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 80 | 134.58 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 81 | 134.66 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 83 | 134.84 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 93 | 135.25 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 126 | 136.32 | radiation | 1 | 14400 | < th | dose dependent | sin | 11 | NA |
| 134 | 136.51 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 136 | 136.51 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 145 | 136.60 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 19 |
| 147 | 136.63 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 150 | 136.68 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 163 | 136.81 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 188 | 137.03 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 16 |
| 228 | 137.57 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 6 |
| 243 | 137.72 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 248 | 137.77 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 19 |
| 250 | 137.78 | radiation | 1 | 43200 | < th | dose independent | sin | 14 | NA |
| 253 | 137.86 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 254 | 137.89 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 19 |
| 269 | 138.05 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 281 | 138.13 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 282 | 138.13 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 18 |
| 285 | 138.14 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 292 | 138.17 | radiation | 1 | 43200 | > th | dose independent | rect. | 16 | 19 |
| 315 | 138.35 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 21 |
| 317 | 138.36 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 17 |
| 337 | 138.42 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 342 | 138.43 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 353 | 138.48 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 359 | 138.49 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 21 |
| 375 | 138.51 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 390 | 138.58 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 396 | 138.63 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 415 | 138.73 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 9 |
| 416 | 138.73 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 15 |
| 421 | 138.74 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 11 |
| 451 | 138.89 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 459 | 138.92 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 19 |
| 469 | 138.98 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 471 | 138.98 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 19 |
| 472 | 138.99 | radiation | 1 | 43200 | > th | dose independent | sin | 13 | NA |
| 487 | 139.05 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 513 | 139.14 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 526 | 139.23 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 535 | 139.28 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 22 |
| 565 | 139.52 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 18 |
| 572 | 139.54 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 12 |
| 604 | 139.78 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 16 |
| 617 | 139.84 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 22 |
| 657 | 139.94 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 676 | 140.05 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 12 |
| 774 | 140.34 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 789 | 140.42 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 802 | 140.53 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 883 | 140.87 | humidity | 90 | 43200 | < th | dose independent | sin | 20 | NA |
| 902 | 140.94 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 949 | 141.11 | radiation | 1 | 14400 | > th | dose dependent | rect. | 18 | 1 |