Os03g0833300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Squamosa-promoter binding-like protein 8.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0833300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Squamosa-promoter binding-like protein 8.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.14 | 0.164 | 10.8 | -0.0154 | 0.424 | 0.355 | 0.281 | 0.101 | 0.122 | 8.15 | 24.9 | 5674 | -- | -- |
| 12.14 | 0.162 | 10.8 | -0.0403 | 0.422 | 0.358 | 0.287 | -- | 0.119 | 8.14 | 25.3 | 5674 | -- | -- |
| 12.35 | 0.164 | 10.8 | -0.00131 | 0.426 | 0.349 | -- | 0.127 | 0.12 | 7.94 | 24.8 | 5746 | -- | -- |
| 12.36 | 0.164 | 10.8 | -0.0362 | 0.424 | 0.361 | -- | -- | 0.118 | 7.94 | 25 | 5691 | -- | -- |
| 21.85 | 0.218 | 10.8 | -0.141 | -- | 0.397 | -- | -0.763 | 0.198 | -- | 29.4 | 5705 | -- | -- |
| 16.95 | 0.193 | 10.8 | 0.0975 | 0.429 | -- | 0.238 | -- | 0.156 | 7.87 | -- | -- | -- | -- |
| 17.1 | 0.194 | 10.8 | 0.103 | 0.431 | -- | -- | -- | 0.155 | 7.74 | -- | -- | -- | -- |
| 22 | 0.218 | 10.8 | 0.00373 | -- | 0.322 | -- | -- | 0.172 | -- | 28.28 | 5745 | -- | -- |
| 12.39 | 0.164 | 10.8 | -- | 0.425 | 0.35 | -- | -- | 0.118 | 7.91 | 25.25 | 5746 | -- | -- |
| 27.11 | 0.243 | 10.8 | 0.109 | -- | -- | -- | -- | 0.162 | -- | -- | -- | -- | -- |
| 17.38 | 0.195 | 10.8 | -- | 0.431 | -- | -- | -- | 0.144 | 7.73 | -- | -- | -- | -- |
| 22 | 0.218 | 10.8 | -- | -- | 0.323 | -- | -- | 0.172 | -- | 28.28 | 5745 | -- | -- |
| 27.42 | 0.244 | 10.8 | -- | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.02 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 3 | 12.08 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 4 | 12.09 | temperature | 25 | 1440 | > th | dose dependent | rect. | 2 | 6 |
| 36 | 12.31 | temperature | 25 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 57 | 12.38 | temperature | 25 | 4320 | > th | dose dependent | rect. | 19 | 16 |
| 59 | 12.39 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 73 | 12.41 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 85 | 12.42 | temperature | 25 | 4320 | > th | dose dependent | sin | 9 | NA |
| 119 | 12.45 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 143 | 12.46 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 150 | 12.46 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 12 |
| 240 | 12.50 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 294 | 12.52 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 3 |
| 299 | 12.52 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 330 | 12.52 | temperature | 25 | 4320 | > th | dose dependent | rect. | 1 | 21 |
| 334 | 12.52 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 22 |
| 406 | 12.53 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 19 |
| 414 | 12.53 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 20 |
| 437 | 12.53 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 23 |
| 441 | 12.54 | temperature | 30 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 464 | 12.54 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 16 |
| 508 | 12.55 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 938 | 12.60 | temperature | 25 | 4320 | > th | dose independent | sin | 5 | NA |
| 947 | 12.60 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 21 |