Os04g0656500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Squamosa-promoter binding-like protein 3.
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Os04g0656500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Squamosa-promoter binding-like protein 3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 88.1 | 0.441 | 7.64 | -0.234 | 0.913 | 0.99 | -0.279 | -0.422 | 0.617 | 7.22 | 24.32 | 1421 | -- | -- |
| 88.27 | 0.438 | 7.63 | -0.165 | 0.941 | 0.965 | -0.26 | -- | 0.624 | 7.19 | 23.97 | 1436 | -- | -- |
| 88.3 | 0.438 | 7.64 | -0.24 | 0.911 | 0.993 | -- | -0.405 | 0.607 | 7.23 | 24.05 | 1420 | -- | -- |
| 87.82 | 0.436 | 7.62 | -0.155 | 0.926 | 0.973 | -- | -- | 0.64 | 7.43 | 23.2 | 2759 | -- | -- |
| 131.92 | 0.535 | 7.65 | -0.156 | -- | 1.01 | -- | -0.129 | 0.634 | -- | 23.89 | 1387 | -- | -- |
| 123.48 | 0.521 | 7.59 | 0.219 | 0.945 | -- | -0.224 | -- | 0.798 | 6.87 | -- | -- | -- | -- |
| 123.61 | 0.521 | 7.59 | 0.215 | 0.945 | -- | -- | -- | 0.798 | 6.86 | -- | -- | -- | -- |
| 131.94 | 0.535 | 7.65 | -0.118 | -- | 0.997 | -- | -- | 0.64 | -- | 23.88 | 1387 | -- | -- |
| 88.36 | 0.438 | 7.62 | -- | 0.92 | 0.945 | -- | -- | 0.65 | 7.4 | 23.18 | 2758 | -- | -- |
| 170.37 | 0.61 | 7.61 | 0.235 | -- | -- | -- | -- | 0.816 | -- | -- | -- | -- | -- |
| 124.83 | 0.523 | 7.59 | -- | 0.947 | -- | -- | -- | 0.774 | 6.85 | -- | -- | -- | -- |
| 131.59 | 0.534 | 7.66 | -- | -- | 0.901 | -- | -- | 0.578 | -- | 24.45 | 7133 | -- | -- |
| 171.83 | 0.612 | 7.61 | -- | -- | -- | -- | -- | 0.79 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.25 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 2 | 84.98 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 3 | 85.53 | humidity | 80 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 4 | 85.97 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 13 | 86.45 | temperature | 25 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 18 | 86.53 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 19 | 86.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 21 | 86.60 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 23 | 86.60 | temperature | 25 | 14400 | < th | dose independent | rect. | 23 | 16 |
| 40 | 86.70 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 43 | 86.72 | temperature | 25 | 14400 | > th | dose independent | rect. | 22 | 17 |
| 54 | 86.76 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 56 | 86.77 | temperature | 25 | 14400 | < th | dose independent | sin | 5 | NA |
| 60 | 86.79 | temperature | 25 | 14400 | < th | dose independent | rect. | 11 | 19 |
| 76 | 86.84 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 19 |
| 81 | 86.84 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 85 | 86.85 | temperature | 25 | 14400 | < th | dose independent | rect. | 11 | 22 |
| 117 | 86.91 | temperature | 25 | 14400 | > th | dose independent | sin | 5 | NA |
| 134 | 86.93 | temperature | 25 | 14400 | < th | dose independent | no | NA | NA |
| 146 | 86.94 | temperature | 25 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 154 | 86.95 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 169 | 86.96 | temperature | 25 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 228 | 87.04 | temperature | 25 | 14400 | > th | dose independent | no | NA | NA |
| 240 | 87.05 | temperature | 25 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 425 | 87.30 | temperature | 25 | 14400 | < th | dose independent | sin | 16 | NA |
| 438 | 87.33 | temperature | 25 | 14400 | > th | dose independent | sin | 16 | NA |
| 463 | 87.35 | humidity | 90 | 43200 | > th | dose dependent | rect. | 15 | 8 |
| 487 | 87.40 | temperature | 20 | 14400 | > th | dose dependent | rect. | 16 | 7 |
| 496 | 87.41 | temperature | 15 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 547 | 87.50 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 548 | 87.50 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 554 | 87.51 | temperature | 20 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 555 | 87.51 | temperature | 30 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 556 | 87.52 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 563 | 87.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 2 | 6 |
| 665 | 87.66 | temperature | 20 | 14400 | > th | dose dependent | sin | 16 | NA |
| 730 | 87.72 | temperature | 20 | 14400 | > th | dose dependent | rect. | 12 | 17 |
| 839 | 87.81 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 19 |
| 906 | 87.85 | temperature | 20 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 962 | 87.88 | temperature | 20 | 14400 | > th | dose dependent | no | NA | NA |
| 982 | 87.88 | temperature | 20 | 14400 | > th | dose dependent | rect. | 15 | 20 |