BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0789100 Os02g0789100|J100084P18
(480 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0789100 Cyclic nucleotide-binding domain containing pr... 1004 0.0
Os06g0188000 Similar to Cyclic nucleotide-gated channel C (... 365 e-101
Os09g0558300 Similar to Cyclic nucleotide-gated channel A (... 294 1e-79
Os12g0163000 Similar to Cyclic nucleotide-gated channel A (... 288 7e-78
Os04g0643600 Similar to Cyclic nucleotide-gated channel C (... 253 1e-67
Os06g0527100 Similar to Cyclic nucleotide-gated channel A (... 251 1e-66
Os02g0255000 Similar to Cyclic nucleotide-gated ion channel... 247 1e-65
Os08g0254600 Cyclic nucleotide-binding domain containing pr... 244 7e-65
Os02g0627700 Similar to Cyclic nucleotide-gated channel A (... 241 9e-64
Os03g0646300 Similar to Cyclic nucleotide-gated channel A (... 239 2e-63
Os06g0527300 Similar to Cyclic nucleotide-gated channel C (... 162 7e-40
Os02g0773400 Ion transport domain containing protein 155 9e-38
Os01g0782700 Similar to Cyclic nucleotide-gated ion channel... 148 1e-35
Os05g0502000 Similar to Cyclic nucleotide-gated ion channel... 142 6e-34
Os03g0758300 Similar to Cyclic nucleotide-gated ion channel... 137 2e-32
>Os02g0789100 Cyclic nucleotide-binding domain containing protein
Length = 480
Score = 1004 bits (2595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/480 (100%), Positives = 480/480 (100%)
Query: 1 MFGAGKVDDEMALKRQRTVRFYDEKAKPTIPTHQKQAGFAASKLGVASSGKNKIFVPGEE 60
MFGAGKVDDEMALKRQRTVRFYDEKAKPTIPTHQKQAGFAASKLGVASSGKNKIFVPGEE
Sbjct: 1 MFGAGKVDDEMALKRQRTVRFYDEKAKPTIPTHQKQAGFAASKLGVASSGKNKIFVPGEE 60
Query: 61 LWYKRILDPSSDFILTWNHIFLFSCFVALFIDPLYFYVPKISYGTPNSCIGTDRHLAITV 120
LWYKRILDPSSDFILTWNHIFLFSCFVALFIDPLYFYVPKISYGTPNSCIGTDRHLAITV
Sbjct: 61 LWYKRILDPSSDFILTWNHIFLFSCFVALFIDPLYFYVPKISYGTPNSCIGTDRHLAITV 120
Query: 121 TFFRSISDLLYFTHIIIKFRTAYINPSSTMRVFGRGDLITDPKEIAWQYLRSDFVVDAVA 180
TFFRSISDLLYFTHIIIKFRTAYINPSSTMRVFGRGDLITDPKEIAWQYLRSDFVVDAVA
Sbjct: 121 TFFRSISDLLYFTHIIIKFRTAYINPSSTMRVFGRGDLITDPKEIAWQYLRSDFVVDAVA 180
Query: 181 ALPLPQILIWFVIPAIKYSTDEHNNNILVLIVLAQYFPRLYLIFPLTYEIVKTTGVVAKT 240
ALPLPQILIWFVIPAIKYSTDEHNNNILVLIVLAQYFPRLYLIFPLTYEIVKTTGVVAKT
Sbjct: 181 ALPLPQILIWFVIPAIKYSTDEHNNNILVLIVLAQYFPRLYLIFPLTYEIVKTTGVVAKT 240
Query: 241 AWQGAAYNMLLYMIASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFI 300
AWQGAAYNMLLYMIASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFI
Sbjct: 241 AWQGAAYNMLLYMIASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFI 300
Query: 301 IRGKLESSTTNGGRTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVE 360
IRGKLESSTTNGGRTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVE
Sbjct: 301 IRGKLESSTTNGGRTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVE 360
Query: 361 AFALQAEDLKFVANQFRRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLS 420
AFALQAEDLKFVANQFRRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLS
Sbjct: 361 AFALQAEDLKFVANQFRRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLS 420
Query: 421 MRESFCSMRSDDSNGEDDSPPKQNLAMKIMSGSRKGPQNMKELPKLRKPDEPDFSAEPCE 480
MRESFCSMRSDDSNGEDDSPPKQNLAMKIMSGSRKGPQNMKELPKLRKPDEPDFSAEPCE
Sbjct: 421 MRESFCSMRSDDSNGEDDSPPKQNLAMKIMSGSRKGPQNMKELPKLRKPDEPDFSAEPCE 480
>Os06g0188000 Similar to Cyclic nucleotide-gated channel C (Fragment)
Length = 245
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/228 (77%), Positives = 197/228 (86%), Gaps = 7/228 (3%)
Query: 250 LLYMIASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESST 309
L + VPFFSQMD QLLDAICERLVSSL T GTYIVREGDPVTEMLFIIRGKLESST
Sbjct: 22 LCLDLVCRVPFFSQMDGQLLDAICERLVSSLSTVGTYIVREGDPVTEMLFIIRGKLESST 81
Query: 310 TNGGRTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDL 369
T+GGRTGFFNS TLK+GDFCGEELLGWALVPKPTVNLPSSTRTVK ++EVEAFAL+AEDL
Sbjct: 82 TDGGRTGFFNSITLKTGDFCGEELLGWALVPKPTVNLPSSTRTVKTIVEVEAFALRAEDL 141
Query: 370 KFVANQFRRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESFCSMR 429
KFVA+QFRRLHS++LQHTFRYYSHHWRTWA+CFIQAAWRRYKRR++A+DLS+RESF S R
Sbjct: 142 KFVASQFRRLHSRKLQHTFRYYSHHWRTWAACFIQAAWRRYKRRRLAKDLSIRESFFSRR 201
Query: 430 SDDSNGEDDSPPKQNLAMKIMSGSRKGPQNMKELPKLRKPDEPDFSAE 477
S EDD P+ +L +++ RKG +KELPK RKP EPDFSAE
Sbjct: 202 S----FEDDGSPEHSL---VLNAVRKGAHIIKELPKFRKPSEPDFSAE 242
>Os09g0558300 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 713
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/236 (62%), Positives = 175/236 (74%), Gaps = 12/236 (5%)
Query: 254 IASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESSTTNGG 313
+ VPFFS+MD QLLDAICERLVS LC + TYI REGDPV EMLF+IRGKLESSTTNGG
Sbjct: 475 LVRRVPFFSEMDYQLLDAICERLVSFLCPERTYISREGDPVNEMLFVIRGKLESSTTNGG 534
Query: 314 RTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDLKFVA 373
R+ FFNS L+ GDF GEELL WAL+PK V+ P STRTV++L EVEAFAL+AEDLKFVA
Sbjct: 535 RSNFFNSIILRPGDFAGEELLTWALLPKTNVHFPLSTRTVQSLTEVEAFALRAEDLKFVA 594
Query: 374 NQFRRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESFC-----SM 428
NQFRRLHSK+LQHTFR+YSHHWRTWA+CFIQAAWR+++RRK+A LS ES+
Sbjct: 595 NQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRQHQRRKLAESLSRWESYSWWPEEHP 654
Query: 429 RSDDSNGEDDSPPKQNLA-------MKIMSGSRKGPQNMKELPKLRKPDEPDFSAE 477
+D E S + +A K S SR+ + + +L+KPDEPDFSA+
Sbjct: 655 PADKPKQEGTSSSTKTIAESAIAQMHKFASASRRFRADDTAIRRLQKPDEPDFSAD 710
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 173/264 (65%), Gaps = 9/264 (3%)
Query: 1 MFGAGKVDDEMALKRQRTVRFY-DEKAKP-TIPTHQKQAG-FAASKLGVASSGKNKIFVP 57
MFG+ +V DE+ ++R+ T R + DE+ +P +A F +++ ++ K K+
Sbjct: 1 MFGS-RVQDEVEMQRRTTNRIFPDERQDQFKLPFQAARADRFGVNRIDAKTTEKIKVISE 59
Query: 58 GEELWYKRILDPSSDFILTWNHIFLFSCFVALFIDPLYFYVPKISY---GTPNSCIGTDR 114
G W++RILDP S +L WN +FL SC ALFIDP ++Y+P + T SCI DR
Sbjct: 60 GNIPWHRRILDPGSSMVLMWNRVFLGSCLFALFIDPFFYYLPLVHVLDESTNRSCIAKDR 119
Query: 115 HLAITVTFFRSISDLLYFTHIIIKFRTAYINPSSTMRVFGRGDLITDPKEIAWQYLRSDF 174
L+IT+T R+ +DL Y +I++KF TAY++P S RV G+G+L+ D K+I +YLR+DF
Sbjct: 120 RLSITITVLRTFADLFYMLNIMVKFHTAYVDPKS--RVLGKGELVLDLKKIQRRYLRTDF 177
Query: 175 VVDAVAALPLPQILIWFVIPAIKYSTDEHNNNILVLIVLAQYFPRLYLIFPLTYEIVKTT 234
+D +A +PLPQ+ +W ++P+IK S N L+++ QY R+YLI PL+ +I+K
Sbjct: 178 FIDLLATIPLPQVTVWIIMPSIKNSDYNIRNTTFALVIMIQYIFRMYLIVPLSNQIIKAA 237
Query: 235 GVVAKTAWQGAAYNMLLYMIASHV 258
GVVAK+AW GAAYN+L YM+ASH+
Sbjct: 238 GVVAKSAWLGAAYNLLYYMLASHI 261
>Os12g0163000 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 648
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 151/295 (51%), Positives = 187/295 (63%), Gaps = 47/295 (15%)
Query: 228 YEIVKTTGVVAKTAWQGAAYNM-------LLYMIASHVPFFSQMDNQLLDAICERLVSSL 280
Y+ + T GV ++ Q ++ L + VPFFSQMD QLLDAICERLVSSL
Sbjct: 347 YKWLATRGVDEESILQSLPLDLRREIQRHLCLALVRRVPFFSQMDEQLLDAICERLVSSL 406
Query: 281 CTQGTYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFNSTTLKSGDFCGEELLGWALVP 340
T+ YIVREGDPV+EMLF+IRG+LESSTT+GGRT FF+S TL+ GDFCGEELL WAL+P
Sbjct: 407 STKDAYIVREGDPVSEMLFVIRGELESSTTDGGRTNFFSSITLRPGDFCGEELLTWALMP 466
Query: 341 KPTVNLPSSTRTVKALIEVEAFALQAEDLKFVANQFRRLHSKRLQHTFRYYSHHWRTWAS 400
P++N P STRTV+++ EVEAFAL+AEDLK+VANQF+RLHSKRLQH FRYYSH WR+W +
Sbjct: 467 NPSLNFPQSTRTVRSVTEVEAFALRAEDLKYVANQFKRLHSKRLQHAFRYYSHQWRSWGA 526
Query: 401 CFIQAAWRRYKRRKMARDLSMRESFCSM-----------------------------RSD 431
CF+Q AWRRYK+RK+AR+LS +E M D
Sbjct: 527 CFVQGAWRRYKKRKLARELSKQEELYYMQGQGGDDGDGHDDSDSAPLLGAGVGAGGDHRD 586
Query: 432 DSNGEDDSPPKQNLAMKIMSGSRK------GPQNMKEL-----PKLRKPDEPDFS 475
+ LA K ++K G M+++ PKL KPDEPDFS
Sbjct: 587 GAAAGAAHLGATFLASKFAKNTKKSAAAHHGKARMEDVSSIKFPKLAKPDEPDFS 641
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 121/173 (69%), Gaps = 9/173 (5%)
Query: 86 FVALFIDPLYFYVPKISYGTPNSCIGTDRHLAITVTFFRSISDLLYFTHIIIKFRTAYIN 145
V LF+DP+YFY + + SC+ D + + VT R+++DL Y H+I+KFRTA++
Sbjct: 1 MVGLFVDPMYFY---LLHTGLKSCVTMDMQIGVGVTAVRTVADLFYLAHMILKFRTAFVA 57
Query: 146 PSSTMRVFGRGDLITDPKEIAWQYLRSDFVVDAVAALPLPQILIWFVIPAIKYSTDEHNN 205
PSS RVFGRG+L+ DP +IA +YL++DF++D A LP+PQ+ IP + S+ H N
Sbjct: 58 PSS--RVFGRGELVRDPDQIAIRYLKNDFIIDLAAMLPIPQVT---CIP-VNNSSANHTN 111
Query: 206 NILVLIVLAQYFPRLYLIFPLTYEIVKTTGVVAKTAWQGAAYNMLLYMIASHV 258
N L +IVL QY PR++LI L +IVK++GVV +TAW GAAYN+LLY +ASHV
Sbjct: 112 NTLSMIVLIQYIPRVFLIVSLNSKIVKSSGVVTRTAWAGAAYNLLLYTLASHV 164
>Os04g0643600 Similar to Cyclic nucleotide-gated channel C (Fragment)
Length = 252
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 158/233 (67%), Gaps = 7/233 (3%)
Query: 250 LLYMIASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESST 309
L + VP F MD +LLDAICERL +L T+ YI+REGDPV EM FI+ G LES T
Sbjct: 19 LCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREGDPVDEMHFILHGCLESET 78
Query: 310 TNGGRTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDL 369
T+GGR+GFFN LK G FCG+ELL WAL PK N P+STRTVKAL EVEAFAL AE+L
Sbjct: 79 TDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTRTVKALTEVEAFALCAEEL 138
Query: 370 KFVANQFRRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESFCSMR 429
KFVA+QFRRLHS+++QHTFR+YS HWRTWA+CFIQAAWRRY +RKMA E + +
Sbjct: 139 KFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYYKRKMAEQHRKEEEAANRQ 198
Query: 430 SDDSNGEDDSPPKQNLAMKIMSGSRKGPQNMKE-----LPKLRKPDEPDFSAE 477
S S+ S A + + + +G ++ + +L KP EPDF+ +
Sbjct: 199 S--SSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVRLPKPPEPDFAVD 249
>Os06g0527100 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 694
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 157/230 (68%), Gaps = 10/230 (4%)
Query: 258 VPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESSTTNGGRTGF 317
VP F MD+QLL+A+C+RL L T+G+ I+RE DPV EMLFI+RG L S TTNGGRTGF
Sbjct: 463 VPMFENMDDQLLNALCDRLKPVLYTEGSCIIREEDPVNEMLFIMRGNLMSMTTNGGRTGF 522
Query: 318 FNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDLKFVANQFR 377
FNS LK GDFCGEELL WAL P +LPSSTRTVK + EVEAFAL+AEDLKFVA QFR
Sbjct: 523 FNSDVLKGGDFCGEELLTWALDPTSVSSLPSSTRTVKTMSEVEAFALRAEDLKFVATQFR 582
Query: 378 RLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESFCSMRSDDSNGED 437
RLHSK+LQHTF++YS HWRTWA+CFIQAAW RY R+K+ L +E +
Sbjct: 583 RLHSKQLQHTFKFYSQHWRTWAACFIQAAWHRYCRKKIEDSLREKEKRLQFAIVNDGATT 642
Query: 438 DSPPKQNLA-------MKIMSGSRKGPQNMKE-LPK--LRKPDEPDFSAE 477
S A M+I+ + +KE +P L+KP EP+F+AE
Sbjct: 643 LSFRAAIYASRFAGNMMRILRRNATRKARLKESVPARLLQKPAEPNFAAE 692
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 145/258 (56%), Gaps = 14/258 (5%)
Query: 11 MALKRQRTVRFYDEKAKPTIPT----------HQKQAGFAASKLGVASSGKNKIFVPGEE 60
M + + VRF D +++ ++ + ++ AG A + S K V E
Sbjct: 2 MMGREDKYVRFEDWRSEQSVMSPRRHNALSSLKERTAGVFAFLGNLVHSETLKRLVLHER 61
Query: 61 LWYKRILDPSSDFILTWNHIFLFSCFVALFIDPLYFYVPKISYGTPNSCIGTDRHLAITV 120
R L P F+ +WN IF+ SC A+ +DPL+FY+P I+ N+C D+ L IT
Sbjct: 62 KLTTRTLHPQGPFLQSWNKIFVLSCIFAVSVDPLFFYIPVIN--DNNTCWYLDKKLEITA 119
Query: 121 TFFRSISDLLYFTHIIIKFRTAYINPSSTMRVFGRGDLITDPKEIAWQYLRSDFVVDAVA 180
+ R +D+ Y HII +FRT YI +S++ FGRG L+ D IA +YL + F++D A
Sbjct: 120 SVLRFFTDIFYILHIIFQFRTGYI--ASSLTTFGRGVLVEDRYAIAKRYLSTYFLIDVFA 177
Query: 181 ALPLPQILIWFVIPAIKYSTDEHNNNILVLIVLAQYFPRLYLIFPLTYEIVKTTGVVAKT 240
LPLPQ++I V+P + S NIL+ IV+ QY PRL I PL +I ++ GV+ +T
Sbjct: 178 VLPLPQVVILVVLPNLGGSEVTKAKNILMFIVICQYVPRLIRIRPLYLQITRSAGVITET 237
Query: 241 AWQGAAYNMLLYMIASHV 258
W GA N+L+Y++ASHV
Sbjct: 238 PWAGAVLNLLIYLLASHV 255
>Os02g0255000 Similar to Cyclic nucleotide-gated ion channel 1 (AtCNGC1) (Cyclic
nucleotide-and calmodulin-regulated ion channel 1)
Length = 299
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/166 (69%), Positives = 133/166 (80%)
Query: 258 VPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESSTTNGGRTGF 317
VP F MD +LLDA+C+RL L T+G+ I+REGDPV EMLFI+RG LES TTNGG+TGF
Sbjct: 68 VPMFENMDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTTNGGQTGF 127
Query: 318 FNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDLKFVANQFR 377
FNS +K GDFCGEELL WAL P NLPSSTRTVK L EVEAFAL+A+DLKFVA QFR
Sbjct: 128 FNSNIIKGGDFCGEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLKFVATQFR 187
Query: 378 RLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRE 423
RLHSK+LQHTFR+YS WRTWA+CFIQAAW RY R+K+ L +E
Sbjct: 188 RLHSKQLQHTFRFYSQQWRTWAACFIQAAWHRYCRKKLEDTLFEKE 233
>Os08g0254600 Cyclic nucleotide-binding domain containing protein
Length = 230
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/226 (58%), Positives = 163/226 (72%), Gaps = 6/226 (2%)
Query: 257 HVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESSTTNGGRTG 316
VPFFS MD+QLLDAICER+ L T+GTYI REGDPV MLFIIRGKLESSTT+GGRTG
Sbjct: 2 QVPFFSAMDHQLLDAICERMTYFLRTEGTYITREGDPVKVMLFIIRGKLESSTTDGGRTG 61
Query: 317 FFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDLKFVANQF 376
FFNS LK GDFCGEELL WAL+P + PSSTRTVK + E+EAF+LQA+D+K VA+ F
Sbjct: 62 FFNSIILKPGDFCGEELLTWALLPSSRDSYPSSTRTVKTIAELEAFSLQADDIKCVASTF 121
Query: 377 RRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYK-RRKMAR-DLSMR-ESFCSMRSD-- 431
R +HSK LQHTFR +S+ WRTWA+ FIQ+AWRR + R+KMA LS R +SF S+ +D
Sbjct: 122 RMMHSKHLQHTFRLHSYQWRTWAARFIQSAWRRRQNRQKMAEVGLSNRWKSFFSLVNDFN 181
Query: 432 DSNGEDDSPPKQNLAMKIMSGSRKGPQNMKELPKLRKPDEPDFSAE 477
D+ ED + ++ + K K+ K R P+EPDFS +
Sbjct: 182 DTRCEDINGSSSTVSHRETVTVSKIASIFKKAQKER-PEEPDFSED 226
>Os02g0627700 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 686
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 155/224 (69%), Gaps = 20/224 (8%)
Query: 254 IASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESSTTNGG 313
+ VP F +MD ++L+AICERL +L T+GT +VRE DPV MLFIIRG L+S TT GG
Sbjct: 480 LVRRVPLFDEMDERMLEAICERLRPALYTRGTRLVRELDPVDSMLFIIRGYLDSYTTQGG 539
Query: 314 RTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDLKFVA 373
R+GFFNS + +G+FCGEELL WAL P+P +LP STRTV+A+ EVEAFAL A+DL+FVA
Sbjct: 540 RSGFFNSCRIGAGEFCGEELLPWALDPRPAASLPLSTRTVRAVSEVEAFALVADDLRFVA 599
Query: 374 NQFRRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESFCSMRSDDS 433
+QFRRLHS R++H FR+YSH WRTWA+CFIQAAWRR KRR+ + +L MRE
Sbjct: 600 SQFRRLHSARIRHRFRFYSHQWRTWAACFIQAAWRRNKRRRASMELRMREG--------- 650
Query: 434 NGEDDSPPKQNLAMKIMSGSRKGPQNMKELPKLRKPDEPDFSAE 477
++ P ++ + S K ++KP EPDF+ E
Sbjct: 651 ---GEARPGGSVRCRRHSCDGKA--------LIKKPMEPDFTVE 683
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 134/222 (60%), Gaps = 18/222 (8%)
Query: 38 GFAASKLGVASSGKNKIFVPGEELWYKRILDPSSDFILTWNHIFLFSCFVALFIDPLYFY 97
F+ + SSG N +F DP I W+ IFL +C +LF+DPL+ Y
Sbjct: 71 AFSEELESLMSSGANHLF-----------FDPRGQLIHLWSKIFLAACLASLFVDPLFLY 119
Query: 98 VPKISYGT-PNSCIGTDRHLAITVTFFRSISDLLYFTHIIIKFRTAYINPSSTMRVFGRG 156
+ GT N CI LA T++ RS+ DL Y HI +FRTA+I PSS RVFGRG
Sbjct: 120 LT----GTRQNMCIELKYSLAFTLSMIRSLLDLFYAAHIFFRFRTAFIAPSS--RVFGRG 173
Query: 157 DLITDPKEIAWQYLRSDFVVDAVAALPLPQILIWFVIPAIKYSTDEHNNNILVLIVLAQY 216
+L+ P +IA +YL F D V ALPLPQ +IW VIP +K S + NIL ++ QY
Sbjct: 174 ELVIQPCKIARRYLAGTFWFDLVTALPLPQFVIWIVIPKLKESATANRKNILRFSIIFQY 233
Query: 217 FPRLYLIFPLTYEIVKTTGVVAKTAWQGAAYNMLLYMIASHV 258
PRL+ IFPL+ +IV TGV+ +TAW GAAYN++LYM+ASHV
Sbjct: 234 LPRLFQIFPLSRQIVMATGVMTETAWAGAAYNLILYMLASHV 275
>Os03g0646300 Similar to Cyclic nucleotide-gated channel A (Fragment)
Length = 696
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 155/230 (67%), Gaps = 23/230 (10%)
Query: 254 IASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESSTTNGG 313
+ VP F+ MD +LLDAICERL +L T+ T+I+REGDPV +MLFIIRG LES TT+GG
Sbjct: 483 LVRRVPLFANMDERLLDAICERLRPALYTERTFIIREGDPVDQMLFIIRGCLESITTDGG 542
Query: 314 RTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDLKFVA 373
R+GFFN + L+ DFCGEELL WAL PK ++LPSSTRTV+AL EVEAFAL +++LKFVA
Sbjct: 543 RSGFFNRSLLEESDFCGEELLTWALDPKAGLSLPSSTRTVRALSEVEAFALHSDELKFVA 602
Query: 374 NQFRRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESFCSMRSDDS 433
QFRR+HSK++QHTFR+YS WRTWA+ +IQAAWRR+ +R+ R S
Sbjct: 603 GQFRRMHSKQVQHTFRFYSQQWRTWAATYIQAAWRRHLKRRAIR--------------SS 648
Query: 434 NGEDDSPPKQNLAMKIMSG-----SRKGPQN-MKELPKLRKPDEPDFSAE 477
G + A M G SR+ + M +P KP EPDF A+
Sbjct: 649 TGLKTTMLVSRFAANAMRGVHRQRSRRADEVLMMPMP---KPSEPDFGAD 695
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 127/195 (65%), Gaps = 2/195 (1%)
Query: 64 KRILDPSSDFILTWNHIFLFSCFVALFIDPLYFYVPKISYGTPNSCIGTDRHLAITVTFF 123
++I DP ++ N F+ SC V++ +DP++FY P+++ N C+G R LAI+ +
Sbjct: 77 RKIFDPQDRLLVRLNRSFVVSCIVSIAVDPVFFYAPQVTANGGNLCVGISRDLAISASVV 136
Query: 124 RSISDLLYFTHIIIKFRTAYINPSSTMRVFGRGDLITDPKEIAWQYLRSDFVVDAVAALP 183
R++ DL + I+++FRTAYI PSS RVFGRG+L+ D +IA +Y R F D ++ LP
Sbjct: 137 RTVVDLFFAARIVLQFRTAYIAPSS--RVFGRGELVIDTAQIAARYFRRFFAADLLSVLP 194
Query: 184 LPQILIWFVIPAIKYSTDEHNNNILVLIVLAQYFPRLYLIFPLTYEIVKTTGVVAKTAWQ 243
LPQI+IW + K + + L++IV QY PR+ I+PL+ E+ +T+G A++A+
Sbjct: 195 LPQIVIWKFLHRSKGAAVLSTKDALLIIVFLQYIPRVVRIYPLSSELKRTSGAFAESAYA 254
Query: 244 GAAYNMLLYMIASHV 258
GAAY +L YM+ASH+
Sbjct: 255 GAAYYLLWYMLASHI 269
>Os06g0527300 Similar to Cyclic nucleotide-gated channel C (Fragment)
Length = 242
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 118/192 (61%), Gaps = 4/192 (2%)
Query: 67 LDPSSDFILTWNHIFLFSCFVALFIDPLYFYVPKISYGTPNSCIGTDRHLAITVTFFRSI 126
L P F+ +WN IF+ SC A+ +DPL+FY+P I+ N+C D+ L IT + R
Sbjct: 47 LHPQGPFLQSWNKIFVLSCIFAVSVDPLFFYIPVINEN--NTCWYLDKKLEITASVLRFF 104
Query: 127 SDLLYFTHIIIKFRTAYINPSSTMRVFGRGDLITDPKEIAWQYLRSDFVVDAVAALPLPQ 186
+D+ Y HII +FRT YI S T F RG L+ D IA +YL + F++D A LPLPQ
Sbjct: 105 TDIFYILHIIFQFRTGYIASSPT--TFDRGVLVEDRYAIAKRYLSTYFLIDVFAVLPLPQ 162
Query: 187 ILIWFVIPAIKYSTDEHNNNILVLIVLAQYFPRLYLIFPLTYEIVKTTGVVAKTAWQGAA 246
++I V+P ++ S NIL+ IVL QY PRL I PL +I ++ GV+ +T W GA
Sbjct: 163 VVILVVLPNLRSSEVAKAKNILMFIVLCQYVPRLIRIRPLYLQITRSAGVITETPWPGAV 222
Query: 247 YNMLLYMIASHV 258
+L+Y++ASHV
Sbjct: 223 LILLIYLLASHV 234
>Os02g0773400 Ion transport domain containing protein
Length = 772
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 124/217 (57%), Gaps = 13/217 (5%)
Query: 66 ILDPSSDFILTWNHIFLFSCFVALFIDPLYFYVPKISYGTPNSCIGTDRHLAITVTFFRS 125
+++P + + WN F+ SC VA+FIDPL+F++ +S N CI + H A + RS
Sbjct: 170 VMNPHAKVVQQWNQFFVISCLVAIFIDPLFFFL--LSVQKDNKCIVLNWHFATALAVVRS 227
Query: 126 ISDLLYFTHIIIKFRTAYINPSSTMRVFGRGDLITDPKEIAWQYLRSDFVVDAVAALPLP 185
++D +YF H++++FR AY+ P S RV G GDL+ +PK+IA +YLR F++D LPLP
Sbjct: 228 VTDAIYFLHMLLQFRLAYVAPES--RVVGAGDLVDEPKKIAVRYLRGYFLLDFFVVLPLP 285
Query: 186 QILIWFVIPA-IKYSTDEHNNNILVLIVLAQYFPRLYLIFPL--TYEIVKTTGVVAKTAW 242
Q++I VIP + ST + N+L + VL QY PR+ PL G + ++AW
Sbjct: 286 QVMILLVIPKYVGLSTANYAKNLLRITVLLQYVPRIIRFVPLLGGQSDSSANGFIFESAW 345
Query: 243 QGAAYNMLLYMIASHVP------FFSQMDNQLLDAIC 273
N+L++++A HV F Q NQ L C
Sbjct: 346 ANFVINLLMFVLAGHVVGSCWYLFGLQRVNQCLRNAC 382
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 100/174 (57%), Gaps = 20/174 (11%)
Query: 256 SHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESSTTNGGRT 315
+ V F+ MD +LDAIC++L +L G+ I+ +G PV +M+FI+RGKLES + +G +
Sbjct: 577 NKVRLFTLMDWPILDAICDKLRQNLYISGSDILYQGGPVEKMVFIVRGKLESISADGSK- 635
Query: 316 GFFNSTTLKSGDFCGEELLGWALVPKPTVNLPS-----------STRTVKALIEVEAFAL 364
L GD CGEELL W L + N + RTV+ L VEAF L
Sbjct: 636 -----APLHEGDVCGEELLTWYL-EHSSANRDGGRMRFHGMRLVAIRTVRCLTNVEAFVL 689
Query: 365 QAEDLKFVANQFRR-LHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMAR 417
+A DL+ V +QF R L + R+Q RY S +WRT A+ IQ AW RY+ R++ R
Sbjct: 690 RASDLEEVTSQFSRFLRNPRVQGAIRYESPYWRTIAATRIQVAW-RYRNRRLKR 742
>Os01g0782700 Similar to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic
nucleotide-and calmodulin-regulated ion channel 4)
(AtHLM1)
Length = 666
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 120/214 (56%), Gaps = 8/214 (3%)
Query: 247 YNMLLYMIASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLE 306
Y++ L ++ VP F MD+ +L+ IC+R+ S + +G IVREGDPV MLFI+RG L+
Sbjct: 456 YHLCLDLV-RQVPLFQHMDDLVLENICDRVKSLVFPKGEIIVREGDPVQRMLFIVRGHLQ 514
Query: 307 SSTTNGGRTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQA 366
SS RTG + TL G+F G+ELL W + LP+S+ T+ + EAF L+A
Sbjct: 515 SSQVL--RTGATSCCTLGPGNFSGDELLSWCMRRPFLERLPASSSTLVTMESTEAFGLEA 572
Query: 367 EDLKFVANQFR-RLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRESF 425
D+K+V FR + R++ + RYYSH WRTWA+ +Q AWRRYK RK LS
Sbjct: 573 ADVKYVTQHFRYTFTNDRVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASLSFIRPR 632
Query: 426 CSMRSDDSNGEDDSPPKQNLAMKIMSGSRKGPQN 459
+ S GE+ K L I++ + P
Sbjct: 633 RPLSRCSSLGEE----KLRLYTAILTSPKPNPNQ 662
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 58 GEELWYKRILDP--SSDFILTWNHIFLFSCFVALFIDPLYFYVPKISYGTPNSCIGTDRH 115
G+ W L+P + + W+ +L +C L +DPL+ Y +S P C+ D
Sbjct: 37 GKRRWAWAPLEPRRAGWWAREWDRAYLLACAAGLMVDPLFLYA--VSVSGPLMCVFLDGW 94
Query: 116 LAITVTFFRSISDLLYFTHIIIKFRTAYINPSS---------TMRVFGRGDLITDPKEIA 166
A VT R D ++ +++++ R A P R G P ++A
Sbjct: 95 FAAAVTVLRCTVDAMHAWNLLMRLRAAVRPPEEDDGADEEVAAERGAGGNGGGPAPAQVA 154
Query: 167 WQYLRSDFVVDAVAALPLPQILIWFVIPA-IKYSTDEHNNNILVLIVLAQYFPRLYLIFP 225
R ++D LP+ Q+++W PA I+ + +L++ L +Y P++Y
Sbjct: 155 RPVSRKGLMLDMFVILPVMQVIVWVAAPAMIRAGSTTAVMTVLLVSFLFEYLPKIYHAVR 214
Query: 226 LTYEIVKTTGVVAKTAWQGAAYNMLLYMIASH 257
L + T V T W G A N++ Y +A+H
Sbjct: 215 LLRRMQNT--YVFGTIWWGIALNLMAYFVAAH 244
>Os05g0502000 Similar to Cyclic nucleotide-gated ion channel 4 (AtCNGC4) (Cyclic
nucleotide-and calmodulin-regulated ion channel 4)
(AtHLM1)
Length = 691
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 105/175 (60%), Gaps = 4/175 (2%)
Query: 247 YNMLLYMIASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLE 306
Y++ L ++ VP F MD+ +L+ IC+R+ S + +G IVREGDPV MLFI+RG L+
Sbjct: 483 YHLCLDLV-RQVPLFHHMDDLVLENICDRVKSLIFPKGEIIVREGDPVQRMLFIVRGHLQ 541
Query: 307 SSTTNGGRTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQA 366
S R G + TL G+F G+ELL W + LP+S+ T+ EAF L+A
Sbjct: 542 CSQVM--RNGATSWCTLGPGNFSGDELLSWCMRRPFMERLPASSSTLVTAESTEAFGLEA 599
Query: 367 EDLKFVANQFR-RLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLS 420
D+K+V FR S +++ + RYYSH WRTWA+ +Q AWRRYK RK LS
Sbjct: 600 GDVKYVTQHFRYTFTSDKVRRSARYYSHGWRTWAAVAVQLAWRRYKHRKTLASLS 654
>Os03g0758300 Similar to Cyclic nucleotide-gated ion channel 2 (AtCNGC2) (Cyclic
nucleotide-and calmodulin-regulated ion channel 2)
(DEFENSE NO DEATH 1)
Length = 618
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 99/161 (61%), Gaps = 3/161 (1%)
Query: 254 IASHVPFFSQMDNQLLDAICERLVSSLCTQGTYIVREGDPVTEMLFIIRGKLESSTTNGG 313
+ VP F MD+ +LD IC+RL + + G ++REGDPV M+F+++GKL S T
Sbjct: 419 LVKQVPLFHGMDDLILDNICDRLRPLVFSSGEKVIREGDPVQRMVFVLQGKLRS--TQPL 476
Query: 314 RTGFFNSTTLKSGDFCGEELLGWALVPKPTVNLPSSTRTVKALIEVEAFALQAEDLKFVA 373
G + L +G+F G+ELL W L LP+S+ T + + +AF L A DL+F+
Sbjct: 477 AKGVVATCMLGAGNFLGDELLSWCLRRPSLDRLPASSATFECVETAQAFCLDAPDLRFIT 536
Query: 374 NQFR-RLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRR 413
QFR + +++L+ T RYYS +WRTWA+ IQ AWRRYK R
Sbjct: 537 EQFRYKFANEKLKRTARYYSSNWRTWAAVNIQLAWRRYKAR 577
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 64 KRILDPSSDFILTWNHIFLFSCFVALFIDPLYFYVPKISY-GTPNSCIGTDRHLAITVTF 122
+R++ P S + WN L + AL +DPL+FY I G P C+ D LA VT
Sbjct: 7 RRLVWPRSKRVQRWNRWILLARAAALAVDPLFFYALSIGRAGQP--CVYMDAGLAAAVTA 64
Query: 123 FRSISDLLYFTHIIIKFRTAYINPSSTMRVFGRGDLITDPKEIAWQYLRS--DFVVDAVA 180
R+ +DL + H++++FR AY++ S V G G L+ DP+ IA Y RS D
Sbjct: 65 LRTAADLAHLAHVLLQFRVAYVSRESL--VVGCGKLVWDPRAIAAHYARSLKGLWFDLFV 122
Query: 181 ALPLPQILIWFVIPAIKYSTDEHNNNILVLIVLAQYF---PRLYLIFPLTYEIVKTTGVV 237
LP+PQ++ W VIP K +E I+ +++L P++Y + ++ K TG +
Sbjct: 123 ILPIPQVIFWLVIP--KLIREEQIKLIMTMLLLLFLLQFLPKVYHSIYIMRKMQKVTGYI 180
Query: 238 AKTAWQGAAYNMLLYMIASHV 258
T W G N+ Y IASH+
Sbjct: 181 FGTIWWGFGLNLFAYFIASHI 201
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,960,845
Number of extensions: 710274
Number of successful extensions: 2157
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 2119
Number of HSP's successfully gapped: 23
Length of query: 480
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 375
Effective length of database: 11,553,331
Effective search space: 4332499125
Effective search space used: 4332499125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 158 (65.5 bits)