BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0748300 Os02g0748300|AK066613
(426 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0748300 Similar to VMP3 protein 882 0.0
Os03g0171600 Cyclin-like F-box domain containing protein 541 e-154
Os11g0602800 Galactose oxidase, central domain containing p... 459 e-129
Os04g0619300 Cyclin-like F-box domain containing protein 391 e-109
Os10g0388200 Cyclin-like F-box domain containing protein 97 3e-20
Os02g0504900 Cyclin-like F-box domain containing protein 91 1e-18
Os10g0409900 Cyclin-like F-box domain containing protein 91 1e-18
Os03g0167800 Cyclin-like F-box domain containing protein 88 1e-17
Os02g0202900 Cyclin-like F-box domain containing protein 77 2e-14
Os04g0380300 Cyclin-like F-box domain containing protein 77 2e-14
Os11g0194000 76 5e-14
Os07g0153400 Cyclin-like F-box domain containing protein 75 7e-14
Os06g0594400 Cyclin-like F-box domain containing protein 74 1e-13
Os05g0267001 Galactose oxidase, central domain containing p... 74 2e-13
Os02g0208700 Galactose oxidase, central domain containing p... 72 6e-13
Os02g0114600 Cyclin-like F-box domain containing protein 71 2e-12
>Os02g0748300 Similar to VMP3 protein
Length = 426
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/426 (100%), Positives = 426/426 (100%)
Query: 1 MLEGQSCLISRSLPSSCDQESRLAYMTYHLLEITRSKRISSTPRIEPDSVAAVAVLTKRP 60
MLEGQSCLISRSLPSSCDQESRLAYMTYHLLEITRSKRISSTPRIEPDSVAAVAVLTKRP
Sbjct: 1 MLEGQSCLISRSLPSSCDQESRLAYMTYHLLEITRSKRISSTPRIEPDSVAAVAVLTKRP 60
Query: 61 KSARNHECEQLDCQGSNDQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIASVNRNFHS 120
KSARNHECEQLDCQGSNDQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIASVNRNFHS
Sbjct: 61 KSARNHECEQLDCQGSNDQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIASVNRNFHS 120
Query: 121 LVRSGELYKERRQLGIAEHWVYFSCNVQEWEAYDPYRSRWMTLPKMPHNECFMCSDKESL 180
LVRSGELYKERRQLGIAEHWVYFSCNVQEWEAYDPYRSRWMTLPKMPHNECFMCSDKESL
Sbjct: 121 LVRSGELYKERRQLGIAEHWVYFSCNVQEWEAYDPYRSRWMTLPKMPHNECFMCSDKESL 180
Query: 181 AVGTELLVFGKEILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQG 240
AVGTELLVFGKEILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQG
Sbjct: 181 AVGTELLVFGKEILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQG 240
Query: 241 RVLRSAELYNSETKRWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLE 300
RVLRSAELYNSETKRWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLE
Sbjct: 241 RVLRSAELYNSETKRWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLE 300
Query: 301 KGTWRVIENMSEGLNGASGAPPLVAVVENELYAAQYAGKLVRKYNIKDNTWTTLGELPER 360
KGTWRVIENMSEGLNGASGAPPLVAVVENELYAAQYAGKLVRKYNIKDNTWTTLGELPER
Sbjct: 301 KGTWRVIENMSEGLNGASGAPPLVAVVENELYAAQYAGKLVRKYNIKDNTWTTLGELPER 360
Query: 361 PEAVNGWGIAFRGCGERLLVIGGPRVMGGGMIELHSWIPREGPLRWNMIGSKPSGNFVYN 420
PEAVNGWGIAFRGCGERLLVIGGPRVMGGGMIELHSWIPREGPLRWNMIGSKPSGNFVYN
Sbjct: 361 PEAVNGWGIAFRGCGERLLVIGGPRVMGGGMIELHSWIPREGPLRWNMIGSKPSGNFVYN 420
Query: 421 CAVMGC 426
CAVMGC
Sbjct: 421 CAVMGC 426
>Os03g0171600 Cyclin-like F-box domain containing protein
Length = 431
Score = 541 bits (1393), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/434 (60%), Positives = 328/434 (75%), Gaps = 12/434 (2%)
Query: 1 MLEGQSCLISRSLPSSCDQESRLAYMTYHLLEITRSKRISSTPRIEPDSVAAVAVLTKRP 60
MLEG SCLISRSLPSSC+ ES+ AY+++ +L R + + D V +P
Sbjct: 2 MLEGNSCLISRSLPSSCEPESQWAYLSHEVLNGKRPAPEDAEAE-DMDEVDFGGGKRSKP 60
Query: 61 KSARNHECEQLDCQGSN--------DQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIA 112
S + H + + GS+ + + S+LI +IGRD +I+CL R SRSDYGS+A
Sbjct: 61 PSPQPHTPDISEGHGSSRHVAASGGGEEHGNGSSLIGAIGRDLTINCLLRLSRSDYGSVA 120
Query: 113 SVNRNFHSLVRSGELYKERRQLGIAEHWVYFSCNVQEWEAYDPYRSRWMTLPKMPHNECF 172
S+N++F SLVR+GE+Y+ RRQ G+AEHWVYFSCNV EW+AYDPYR RW+ +PKMP +ECF
Sbjct: 121 SLNKDFRSLVRNGEIYRLRRQSGVAEHWVYFSCNVLEWDAYDPYRERWIQVPKMPPDECF 180
Query: 173 MCSDKESLAVGTELLVFGKEILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIV 232
MCSDKESLAVGTELLVF ++HIV YSILTNSW+ M +PRCLFGS S G KA V
Sbjct: 181 MCSDKESLAVGTELLVFA---MAHIVFRYSILTNSWTRADPMISPRCLFGSTSVGAKAYV 237
Query: 233 AGGMDAQGRVLRSAELYNSETKRWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLT 292
AGG D+ GR+L SAE+Y+SET W LP MN+AR+MCSGVFM+GKFYV+GG+ASN +VLT
Sbjct: 238 AGGTDSSGRILSSAEMYDSETHSWTPLPSMNRARKMCSGVFMDGKFYVVGGVASNNKVLT 297
Query: 293 CGEEYDLEKGTWRVIENMSEGLNGASGAPPLVAVVENELYAAQYAGKLVRKYNIKDNTWT 352
CGEEYDL++ +WRVIENMSEGLNG +GAPPL+AVV NELYAA Y+ K V+KY+ ++N W
Sbjct: 298 CGEEYDLKRRSWRVIENMSEGLNGVTGAPPLIAVVNNELYAADYSEKDVKKYDKQNNKWI 357
Query: 353 TLGELPERPEAVNGWGIAFRGCGERLLVIGGPRVMGGGMIELHSWIPREGPLRWNMIGSK 412
TLG+LPER ++NGWG+AFR CG+RL+VIGGPR GG IEL+SW P E P WN+I +
Sbjct: 358 TLGKLPERSVSMNGWGLAFRACGDRLIVIGGPRTSIGGTIELNSWTPDERPPVWNLIARR 417
Query: 413 PSGNFVYNCAVMGC 426
PSGNFVYNCAVMGC
Sbjct: 418 PSGNFVYNCAVMGC 431
>Os11g0602800 Galactose oxidase, central domain containing protein
Length = 432
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/354 (62%), Positives = 274/354 (77%), Gaps = 2/354 (0%)
Query: 74 QGSNDQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERRQ 133
Q ++ G +++S LI +IGR+ +I+CL RS YG IA +NR+F SL+RSG+LY+ RR+
Sbjct: 80 QDADQNGEANTSELIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRRE 139
Query: 134 LGIAEHWVYFSCNVQEWEAYDPYRSRWMTLPKMPHNECFMCSDKESLAVGTELLVFGKEI 193
I EH +Y SCNV EW+ +DP R RW +P MP ECF +DKESLAVGT +LVFGK++
Sbjct: 140 ARIVEHMIYCSCNVLEWDGFDPCRQRWFNIPSMPPIECFTLADKESLAVGTNILVFGKKV 199
Query: 194 LSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVLRSAELYNSET 253
+H+VL YS+L+NSW+ G MN+PRCLFGSASFGEKAIVAGG+ G L SAELY+SE
Sbjct: 200 EAHVVLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAGGIGDNG-TLSSAELYDSEA 258
Query: 254 KRWITLPCMNKARRMCSGVFMNGKFYVIGGMASN-TEVLTCGEEYDLEKGTWRVIENMSE 312
K W TLP MN+AR+MCSG FM+GKFYVIGG A N E+L CGEE+DLEKGTWR+I +M+
Sbjct: 259 KTWTTLPSMNRARKMCSGFFMDGKFYVIGGKADNHNEILNCGEEFDLEKGTWRLIPDMAS 318
Query: 313 GLNGASGAPPLVAVVENELYAAQYAGKLVRKYNIKDNTWTTLGELPERPEAVNGWGIAFR 372
GLNG SGAPPLVAVV NELYAA YA K VR+Y+ +N W TLG LPE+ +VNGWG+AFR
Sbjct: 319 GLNGGSGAPPLVAVVNNELYAADYAEKEVRRYDKVNNAWITLGSLPEKYTSVNGWGLAFR 378
Query: 373 GCGERLLVIGGPRVMGGGMIELHSWIPREGPLRWNMIGSKPSGNFVYNCAVMGC 426
GCG++L+VIGG GGG+IE+ SWIP G W +IGS+ SG+FVYNCAVMGC
Sbjct: 379 GCGDKLIVIGGMSAPGGGVIEICSWIPNNGQPDWKIIGSRRSGSFVYNCAVMGC 432
>Os04g0619300 Cyclin-like F-box domain containing protein
Length = 455
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/355 (55%), Positives = 245/355 (69%), Gaps = 10/355 (2%)
Query: 75 GSNDQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERRQL 134
GSND F + D + CLA SRSDY S++ +N+ F+ L+ SG LY+ RR+
Sbjct: 108 GSNDCFFP-------GLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKY 160
Query: 135 GIAEHWVYFSCNVQEWEAYDPYRSRWMTLPKMPHNECFMCSDKESLAVGTELLVFGKEIL 194
GI EHWVY +C++ WEA+DP R RWM LP+MP +ECF C+DKESLAVGT+LLVFG+E
Sbjct: 161 GIVEHWVYLACSLMPWEAFDPSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFGREYT 220
Query: 195 SHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVLRSAELYNSETK 254
+ Y++L WS MN PRCLF S SFGE AIVAGG D G+VL+SAELYNSET
Sbjct: 221 GLAIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYNSETG 280
Query: 255 RWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTWRVIENMSEGL 314
W TLP MN RR+ SG FM+GKFYVIGG++S + LTCGEEY+LE TWR I +M G
Sbjct: 281 HWETLPDMNLPRRLSSGFFMDGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHDMYPGG 340
Query: 315 NGASGAPPLVAVVENELYAAQYAGKLVRKYNIKDNTWTTLGELPERPEAVNGWGIAFRGC 374
AS +PPLVAVV N+LYAA A +V+KY+ +NTW + LP R ++ NGWG+AF+ C
Sbjct: 341 TSASQSPPLVAVVNNQLYAADQATNVVKKYDKGNNTWNIVKPLPVRADSSNGWGLAFKAC 400
Query: 375 GERLLVIGGPRVMGGGMIELHSWIPREGP--LRWNMIGSKP-SGNFVYNCAVMGC 426
G+RLLVIGG RV G +I LHSW P +G W ++ K +G FVYNCA+MGC
Sbjct: 401 GDRLLVIGGHRVPRGEVILLHSWCPEDGNGGADWEVLSVKERAGVFVYNCAIMGC 455
>Os10g0388200 Cyclin-like F-box domain containing protein
Length = 347
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 42/324 (12%)
Query: 85 STLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERRQLGIAEHWVYFS 144
STLI + + ++ CLAR + + V ++ + VR+GEL K R Q+ E +
Sbjct: 3 STLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVL 62
Query: 145 CNVQE--WEAYDPYRSRWMTLPKMPHNECFMCSDKESLAVGTELLVFG------------ 190
E W+ YDP R +W+TLP MP ++ + +V +L V G
Sbjct: 63 AFEPENMWQLYDPLRDKWITLPVMP-SQIRNIARFGVASVAGKLYVIGGGSDRVDPLTGD 121
Query: 191 --KEILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVLRSAEL 248
+ S+ V SY L W M R +F + IVAGG + + AE+
Sbjct: 122 HDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAEI 181
Query: 249 YNSETKRWITLPCMNKAR-RMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTWRVI 307
YN E W LP + +A CSG+ + GK +V+ ++L G + +E +W
Sbjct: 182 YNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVLHKGLPTVQILEDGNAWAVEDYSW--- 238
Query: 308 ENMSEGLNGASGAPPLVAVVENELYAAQYAGKL-VRKYNIKDNTWTTLGELPERPEAVNG 366
L G +A+V ELY + + R N D + E R
Sbjct: 239 ------LQGP------MAMVRGELYVLSNSCIMKQRGVNFPDKMVSCASEFQSR------ 280
Query: 367 WGIAFRGCGERLLVIGGPRVMGGG 390
G G G+ + ++GG V+G G
Sbjct: 281 IGFGMIGLGDNIYLVGG--VIGPG 302
>Os02g0504900 Cyclin-like F-box domain containing protein
Length = 385
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 120/296 (40%), Gaps = 25/296 (8%)
Query: 74 QGSNDQGFSDS-STLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERR 132
QG G SD+ LI + D + CLA RS + + SV++ + S + S E R+
Sbjct: 34 QGFMPIGESDAYCALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRK 93
Query: 133 QLGIAEHWVYF-----SCNVQEWEAYDPYRSRWMTLPKMPHNE----CFMCSDKESLAVG 183
++G E WVY WE + LP MP + D + +
Sbjct: 94 EVGKLEEWVYVLTADAGSKGSHWEVLGCSGQKHSPLPPMPGPTKAGFGVVVLDGKLFVIA 153
Query: 184 TELLVFGKEILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVL 243
GKE +S V Y N W MN RC F A VAGG G L
Sbjct: 154 GYAADHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGFGPNGDSL 213
Query: 244 RSAELYNSETKRWITLPCMNKARRMCSGVFMNGKFYVIGGMA----SNTEVLTCGEEYDL 299
S E+Y++E +W + + + R C GK YV+GG + NT + + Y+
Sbjct: 214 SSVEVYDAEQNKWTLIESLRRPRWGCFACSFEGKLYVMGGRSRFTIGNTRFV---DVYNP 270
Query: 300 EKGTWRVIENMSEGLNGASGAPPLVAVVENELYAAQYAG-KLVRKYNIKDNTWTTL 354
+W ++N + AV++ +L+ ++ + + +N DN+W +
Sbjct: 271 NDNSWGEVKNGCVMVTAH-------AVLDKKLFCIEWKNQRSLAVFNPADNSWQKV 319
>Os10g0409900 Cyclin-like F-box domain containing protein
Length = 442
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 127/292 (43%), Gaps = 20/292 (6%)
Query: 74 QGSNDQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERRQ 133
+GS + + L+ + D +I+CL R R ++ ++ V + ++ L+ Y R++
Sbjct: 69 RGSRKERSRTQAPLLPGLPDDLAIACLIRVPRVEHPNLRIVCKRWNRLLSGNYYYSLRKR 128
Query: 134 LGIAEHWVYFSCNVQE----WEAYDPYRSRWMTLPKMPHNECFMCSDKESLAVGTELLVF 189
G+AE WVY +E W A+DP W +LP +P ++ G L +F
Sbjct: 129 NGMAEEWVYVFKRDREGKISWHAFDPLHQLWKSLPPVPAEYSEALGFGCAVLSGCYLYLF 188
Query: 190 -GKEILS---HIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGG-MDAQGRVLR 244
GK+ L V+ Y+ TN W DM R FGS VAGG + R L
Sbjct: 189 GGKDPLRGSMRRVVFYNARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLP 248
Query: 245 SAELYNSETKRWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTW 304
SAE+Y+ RW + MN GV +GK++ + G+ S+ +V + E Y W
Sbjct: 249 SAEVYDPNRNRWACVAEMNNGMVPFIGVVYDGKWF-LKGLDSHRQVTS--EVYLPSSNLW 305
Query: 305 RVIEN-MSEGLNGASGAPPLVAVVENELYAAQ-YAGKLVRKYNIKDNTWTTL 354
I++ M G S +LY++ G +R Y+ TW
Sbjct: 306 STIDDEMVTGWRNPS------ITFNGKLYSSDCRDGCKLRVYDPNTGTWAKF 351
>Os03g0167800 Cyclin-like F-box domain containing protein
Length = 438
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 129/292 (44%), Gaps = 20/292 (6%)
Query: 74 QGSNDQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERRQ 133
+ S+ + + L+ + D +I+CL R R ++ ++ V + ++ L+ Y R++
Sbjct: 65 RSSHKERCRTQAPLLPGLPDDLAITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKK 124
Query: 134 LGIAEHWVYFSCNVQE----WEAYDPYRSRWMTLPKMPHNECFMCSDKESLAVGTELLVF 189
LG+AE WV+ ++ W A+DP W +LP +P ++ G L +F
Sbjct: 125 LGMAEEWVFVFKRDRDRKISWHAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLF 184
Query: 190 -GKEILS---HIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGG-MDAQGRVLR 244
GK+ + V+ Y+ N W DM R FGS + VAGG + R LR
Sbjct: 185 GGKDPVRGSMRRVVFYNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTLR 244
Query: 245 SAELYNSETKRWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTW 304
SAE Y+ RW + M+ GV +GK++ + G+ S+ +V++ E Y W
Sbjct: 245 SAEFYDPNRNRWSYISEMSTGMVPFIGVVYDGKWF-LKGLDSHRQVVS--EVYMPTSNVW 301
Query: 305 RVI-ENMSEGLNGASGAPPLVAVVENELYAAQ-YAGKLVRKYNIKDNTWTTL 354
V + M G S LY+A+ G +R Y+ +WT
Sbjct: 302 SVTADEMVTGWRNPS------ICFNGRLYSAECRDGCKLRVYDRDTRSWTRF 347
>Os02g0202900 Cyclin-like F-box domain containing protein
Length = 436
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 111/280 (39%), Gaps = 20/280 (7%)
Query: 87 LISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERRQLGIAEHWVYFSCN 146
LI + D +++CL R R D+ + V R + L+ Y RR+LG+AE WVY
Sbjct: 76 LIPGLPDDLAVACLIRVPRGDHWKLRLVCRRWSRLLAGNYFYGLRRRLGLAEQWVYAVKR 135
Query: 147 VQE----WEAYDPYRSRWMTLPKMPHNECFMCSDKESLAVGTELLVFG----KEILSHIV 198
E W+ DP R W LP +P ++ G L + G + V
Sbjct: 136 DGEGRVSWDVLDPARLAWRALPPVPGEYAGAAGFGCAVLGGCHLYLLGGSDPRRGPMRRV 195
Query: 199 LSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVA-----GGMDAQGRVLRSAELYNSET 253
+ YS +N W DM R FG G + VA G G LRS E+++
Sbjct: 196 VFYSARSNRWHRAPDMLRRRHGFGCCVMGNRLYVAGGEGCGVGGGGGGGLRSVEVFDPAK 255
Query: 254 KRWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTWRVIENMSEG 313
RW + M + G++YV G+ + +V++ + Y E W +
Sbjct: 256 NRWSFVSDMAASLMPFVSAVHGGRWYV-KGLGAQRQVMS--QVYSPEADAWSAAHELDAM 312
Query: 314 LNGASGAPPLVAVVENELYAAQ-YAGKLVRKYNIKDNTWT 352
+ G A + LYAA G +R Y+ W+
Sbjct: 313 VTGWRSPS---ASLGGRLYAADCKDGCRLRAYDEAAGAWS 349
>Os04g0380300 Cyclin-like F-box domain containing protein
Length = 375
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 9/211 (4%)
Query: 87 LISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERRQLGIAEHWVYFSCN 146
LI + D + CLA RS + + +V++++ S + S E R+++G E +Y
Sbjct: 38 LIPGLPEDLAKVCLALVPRSYFPVMGAVSKSWMSFIGSKEFIAVRKEVGRLEERIYALIT 97
Query: 147 VQ-----EWEAYDPYRSRWMTLPKMP----HNECFMCSDKESLAVGTELLVFGKEILSHI 197
WE + LP MP + D + L + + +GKE +S
Sbjct: 98 GDGGKGPYWEVLGSLEQQNRMLPPMPGLTKAGFSVVVLDGKLLVMAGYGVDYGKECVSDE 157
Query: 198 VLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVLRSAELYNSETKRWI 257
V Y N W+ MN R F A VAGG + G L S E+Y+ + +W
Sbjct: 158 VYQYDARLNRWAALAKMNVARRDFACAEVNGAVYVAGGFGSDGDGLSSVEVYDPQRNKWT 217
Query: 258 TLPCMNKARRMCSGVFMNGKFYVIGGMASNT 288
+ + + R NGK Y++GG +S T
Sbjct: 218 IIESLRRPRWGSFACSFNGKLYIMGGRSSFT 248
>Os11g0194000
Length = 93
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 43/60 (71%)
Query: 216 APRCLFGSASFGEKAIVAGGMDAQGRVLRSAELYNSETKRWITLPCMNKARRMCSGVFMN 275
P L G SFGE AIVAGG D G+VL+SAELYNSET W TLP MN ARR+ SG F++
Sbjct: 8 GPVWLDGQGSFGEIAIVAGGCDKNGQVLKSAELYNSETGHWETLPDMNLARRLSSGFFLD 67
>Os07g0153400 Cyclin-like F-box domain containing protein
Length = 406
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 27/295 (9%)
Query: 85 STLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRS-GELYKERRQLGIAEHWVY- 142
+ LI + D +++CL R + + V R +H L+ + +R+ +G ++
Sbjct: 51 TPLIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFT 110
Query: 143 ---FSCNVQ-EWEAYDPYRSRWMTLPKMPHNE--C---FMC----SDKESLAVGTELLVF 189
C + +W+ D W T+P MP + C F C SD L G LV
Sbjct: 111 LAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCGG--LVS 168
Query: 190 GKEILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVLRSAELY 249
+ H+VL Y + N W+ M A R F + VAGG L SAE+
Sbjct: 169 DMDCPLHLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQFELNSAEVL 228
Query: 250 NSETKRWITLPCMNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTWRVIE- 308
+ W + M ++G+ YV G A G+ YD + W V+
Sbjct: 229 DPVKGVWQPVASMGMNMASSDSAVISGRLYVTEGCAWPFFSSPRGQVYDPKIDRWEVMPV 288
Query: 309 NMSEGLNGASGAPPLVAVVENELYA-AQYAGKLVRKYNIKDNTWTTLG--ELPER 360
M EG G S V++ L+ ++Y V+ Y+ + ++W ++ +PER
Sbjct: 289 GMREGWTGLS------VVIDKHLFVISEYERMKVKVYDPETDSWDSVKGPPMPER 337
>Os06g0594400 Cyclin-like F-box domain containing protein
Length = 381
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 154 DPYRSRWMTLPKMPHNE------CFMCSDKESLAVGTELLVFG-----KEILSHIVLSYS 202
DP RW LP++ C + + + L+V G + VL Y
Sbjct: 96 DPAEGRWTPLPEVGGASGSLPLFCQVAAVDGGVEGRKRLVVVGGWDPETWAPTDSVLVYD 155
Query: 203 ILTNSWSPGVDMNAPR-CLFGSASFGEKAIVAGGMDAQGRVLRSAELYNSETKRWITLPC 261
LT +W G M PR F A+ G K VAGG D + LRSA Y+ + W LP
Sbjct: 156 FLTGAWRRGAAMPGPRRSFFACAAVGGKVFVAGGHDEEKNALRSALAYDPDADAWAALPD 215
Query: 262 MNKARRMCSGVFMNGKFYVIGGMASNTE--VLTCGEEYDLEKGTWRVIEN 309
M + R G+ ++GKF V+GG + + + E +D TW ++
Sbjct: 216 MAEERDEPRGLCVDGKFLVVGGYPTPAQGRFVGSAEWFDPATSTWSAVQE 265
>Os05g0267001 Galactose oxidase, central domain containing protein
Length = 93
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 220 LFGSASFGEKAIVAGGMDAQGRVLRSAELYNSETKRWITLPCMNKARRMCSGVFMNGKFY 279
LF S SF E AIVAGG D G+VL+SAELYNSET W TL MN ARR+ S F++G FY
Sbjct: 27 LFASGSFDEIAIVAGGCDKNGQVLKSAELYNSETGHWETLADMNLARRLSSSFFLDG-FY 85
>Os02g0208700 Galactose oxidase, central domain containing protein
Length = 375
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 65/163 (39%), Gaps = 11/163 (6%)
Query: 153 YDPYRSRWMTLPKMPH--NECFMCSDKESLAVGTE---LLVFG-----KEILSHIVLSYS 202
+DP W LP +P C A G E L+V G + V Y
Sbjct: 36 HDPVAGGWAALPPLPGAGGLPLFCQLAAVAACGGERRRLVVVGGWDPETWAPTDAVHVYD 95
Query: 203 ILTNSWSPGVDMNAPR-CLFGSASFGEKAIVAGGMDAQGRVLRSAELYNSETKRWITLPC 261
L+ SW G M PR F A+ G VAGG D + LRSA Y++E W+ LP
Sbjct: 96 FLSGSWRRGAAMPGPRRSFFACAAVGRWVFVAGGHDEEKNALRSAVAYDAEADAWVPLPD 155
Query: 262 MNKARRMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTW 304
M R GV + G+F +GG + + G + W
Sbjct: 156 MAAERDEARGVCVGGRFVAVGGYPTEAQGRFAGSAEAFDPAAW 198
>Os02g0114600 Cyclin-like F-box domain containing protein
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 46/334 (13%)
Query: 70 QLDCQGSNDQGFSDSSTLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYK 129
+L C G + G ++LI + + +I CLAR R + ++ V++ + +L+ S E +
Sbjct: 10 KLSCSGMDSDG--PHTSLIHGLPDEIAILCLARVPRRYHNALRCVSKRWRALLSSEEWHS 67
Query: 130 ERRQLGIAEHWVYFSCNVQEWEAY----DPY-RS-RWMTLPKMPHNECFMCSDKESLAVG 183
R++ + E WVY C + Y DP RS + M + + P CS +E +++
Sbjct: 68 CRKRNNLDEPWVYVICRSTGIKCYVLAPDPTTRSLKIMQVIEPP------CSSREGISIE 121
Query: 184 T---ELLVFGK----EILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGM 236
T L + G + + V Y +N WS M RC F SA+ +K + GG+
Sbjct: 122 TLDKRLFLLGGCSWLKDANDEVFCYDASSNCWSSVAPMPTARCYFVSAALDKKLYITGGL 181
Query: 237 DAQGRVLRSAELYNSETKRWITLPCMNKARRMCSGVF----MNGKFYVIGGMASNTEVLT 292
+ S ++Y+ T W C++K + + ++G+ + A N
Sbjct: 182 GLTDKSPNSWDIYDPVTNSW----CVHKNPMLTPDIVKFVALDGELVTVHKAAWNRMYF- 236
Query: 293 CGEEYDLEKGTWRVIENMSEGLNGASGAPPLVAVVENELYA-AQYAGKLVRKYNIKDNTW 351
YD TWR EN E SG+ V++ LY Q G + + + W
Sbjct: 237 -AGIYDPLCRTWRGTEN--EIALCWSGS---TVVMDGTLYMLEQSLGTKLMMWQKETKEW 290
Query: 352 TTLGELPE---RPEAVNGWGIAFRGCGERLLVIG 382
LG L + RP G G ++ +IG
Sbjct: 291 IMLGRLSDKLTRPPC------ELVGIGRKIYIIG 318
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,974,994
Number of extensions: 698228
Number of successful extensions: 1497
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 1471
Number of HSP's successfully gapped: 16
Length of query: 426
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 322
Effective length of database: 11,605,545
Effective search space: 3736985490
Effective search space used: 3736985490
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)